BLASTX nr result
ID: Rauwolfia21_contig00036388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00036388
(828 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containi... 402 e-109
ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containi... 393 e-107
ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containi... 352 9e-95
emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera] 352 1e-94
ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containi... 338 2e-90
ref|NP_172899.1| pentatricopeptide repeat-containing protein [Ar... 317 3e-84
ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arab... 316 6e-84
ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containi... 308 2e-81
ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containi... 308 2e-81
gb|ESW20590.1| hypothetical protein PHAVU_006G221900g [Phaseolus... 303 4e-80
ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Caps... 303 4e-80
ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containi... 303 6e-80
ref|XP_003624021.1| Pentatricopeptide repeat-containing protein ... 293 7e-77
ref|XP_003624026.1| Pentatricopeptide repeat-containing protein ... 292 9e-77
gb|EOY26402.1| Pentatricopeptide repeat superfamily protein isof... 281 3e-73
gb|EOY26401.1| Pentatricopeptide repeat superfamily protein isof... 281 3e-73
ref|XP_006417007.1| hypothetical protein EUTSA_v10009648mg [Eutr... 275 1e-71
gb|EMJ26368.1| hypothetical protein PRUPE_ppa002283mg [Prunus pe... 273 4e-71
gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical ... 270 4e-70
ref|XP_002519368.1| pentatricopeptide repeat-containing protein,... 265 2e-68
>ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Solanum tuberosum]
Length = 758
Score = 402 bits (1032), Expect = e-109
Identities = 185/275 (67%), Positives = 228/275 (82%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
KQ HA L Q SL NYWVA LI LCTR+HAPP Y +F+S H+PNVF+FTN+LKF+
Sbjct: 18 KQLHAQLFQRSLC--SDNYWVAQLIKLCTRLHAPPTYVSRVFDSVHQPNVFIFTNILKFY 75
Query: 181 SRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNV 360
S+ GA SDVL LFD+MQK +V PDAFVYP+LIK++GK G+ FHAH +K+G D D+++ N
Sbjct: 76 SQLGAHSDVLYLFDKMQKCNVAPDAFVYPILIKASGKWGVVFHAHCIKMGHDWDRFVRNA 135
Query: 361 IMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVITW 540
IMD+YGK+GP+E ARELFDEIPE+ VADWN++ISG WNWGNEVEA+ LFDLMPEK+V+TW
Sbjct: 136 IMDMYGKFGPLEIARELFDEIPERAVADWNAMISGCWNWGNEVEARSLFDLMPEKNVVTW 195
Query: 541 TAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIR 720
TAMVTGYS+ KDLE AR++FD+MPE++VVSWNAM+SGYAQNG +EE + LF+E++S G+
Sbjct: 196 TAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCSEEVIRLFNEMMSCGVC 255
Query: 721 PDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
PDETTWV VIS CSS D LA +VKMINDKG+R
Sbjct: 256 PDETTWVTVISLCSSHGDASLAEGLVKMINDKGVR 290
Score = 119 bits (297), Expect = 2e-24
Identities = 72/222 (32%), Positives = 120/222 (54%), Gaps = 6/222 (2%)
Frame = +1
Query: 112 AVSIFNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKP-DAFVYPLLIKSAG 288
A S+F+ E NV +T M+ +SRR + FD+M + V +A +
Sbjct: 180 ARSLFDLMPEKNVVTWTAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCS 239
Query: 289 KAGIAFHAHLLKVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVA----DWNSI 456
+ I ++ G+ D+ ++ L +G A L I +K V ++
Sbjct: 240 EEVIRLFNEMMSCGVCPDETTWVTVISLCSSHGDASLAEGLVKMINDKGVRFNCFAKTAL 299
Query: 457 ISGYWNWGNEVEAKKLFD-LMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSW 633
+ Y GN ++K+FD L K+++TW AM++ Y+++ DL ARR FD +PEK V+SW
Sbjct: 300 LDMYAKCGNLAMSRKIFDELGTYKNLVTWNAMISAYARVGDLASARRLFDTVPEKNVISW 359
Query: 634 NAMISGYAQNGFTEEAVTLFSEVLSAGIRPDETTWVAVISSC 759
N++I+GYAQNG ++ A+ LF ++++ + PDE T V+VIS+C
Sbjct: 360 NSIIAGYAQNGQSKVAIDLFKDMIAKDVLPDEVTMVSVISAC 401
Score = 95.1 bits (235), Expect = 3e-17
Identities = 74/289 (25%), Positives = 115/289 (39%), Gaps = 76/289 (26%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPL----------- 270
F+ E +V + ML +++ G +V+ LF+ M V PD +
Sbjct: 215 FDQMPERSVVSWNAMLSGYAQNGCSEEVIRLFNEMMSCGVCPDETTWVTVISLCSSHGDA 274
Query: 271 -----LIKSAGKAGIAFHAHLLKVGLD---------------------RDKYICNVIMDL 372
L+K G+ F+ LD ++ N ++
Sbjct: 275 SLAEGLVKMINDKGVRFNCFAKTALLDMYAKCGNLAMSRKIFDELGTYKNLVTWNAMISA 334
Query: 373 YGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVI------ 534
Y + G + +AR LFD +PEKNV WNSII+GY G A LF M KDV+
Sbjct: 335 YARVGDLASARRLFDTVPEKNVISWNSIIAGYAQNGQSKVAIDLFKDMIAKDVLPDEVTM 394
Query: 535 ----------------TWT-----------------AMVTGYSKMKDLERARRFFDEMPE 615
W A++ YSK +++ A + F M
Sbjct: 395 VSVISACGHLGALEFGNWAVNFLEKHQIKLSISGDNALIFMYSKCGNMKDAEKVFQSMDS 454
Query: 616 KTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIRPDETTWVAVISSCS 762
+ V+S+N +I+G+A G EAV L ++ I PD T+V V+++CS
Sbjct: 455 RDVISYNTLITGFAAYGNAVEAVELLWKMKKENIEPDRITYVGVLTACS 503
Score = 74.3 bits (181), Expect = 5e-11
Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Frame = +1
Query: 121 IFNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGI 300
+F++ E NV + +++ +++ G + LF M DV PD +I + G G
Sbjct: 347 LFDTVPEKNVISWNSIIAGYAQNGQSKVAIDLFKDMIAKDVLPDEVTMVSVISACGHLGA 406
Query: 301 A---------FHAHLLKVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNS 453
H +K+ + D N ++ +Y K G ++ A ++F + ++V +N+
Sbjct: 407 LEFGNWAVNFLEKHQIKLSISGD----NALIFMYSKCGNMKDAEKVFQSMDSRDVISYNT 462
Query: 454 IISGYWNWGNEVEAKKLFDLMP----EKDVITWTAMVTGYSKMKDLERARRFFDEMPEKT 621
+I+G+ +GN VEA +L M E D IT+ ++T S LE +R FD + +
Sbjct: 463 LITGFAAYGNAVEAVELLWKMKKENIEPDRITYVGVLTACSHGGLLEEGQRIFDSIKDPD 522
Query: 622 VVSWNAMISGYAQNGFTEEAVTLFSEV 702
+ M+ +NG +EA L +
Sbjct: 523 SDHYACMVDLLGRNGKLDEAKCLIGSM 549
>ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Solanum lycopersicum]
Length = 758
Score = 393 bits (1010), Expect = e-107
Identities = 184/275 (66%), Positives = 226/275 (82%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
KQFHA L Q SL NYWVA LI LCTR+HAP Y +F+S H+PNVFVFTN+LKF+
Sbjct: 18 KQFHAQLFQRSLC--SDNYWVAQLIKLCTRLHAPSTYVSRVFDSVHQPNVFVFTNILKFY 75
Query: 181 SRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNV 360
S+ GA SDVL LFD+MQK +V PDAFVYP+LIK++GK GI FHAH +K+G D D+++ N
Sbjct: 76 SQLGAYSDVLYLFDKMQKSNVAPDAFVYPILIKASGKWGIVFHAHCIKMGHDWDRFVRNA 135
Query: 361 IMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVITW 540
IMD+YGK+GP+E ARELFDEIPE+ VADWN++ISG WNWG+EVEA+ LFDLMPEK+V+TW
Sbjct: 136 IMDVYGKFGPLEIARELFDEIPERAVADWNAMISGCWNWGDEVEARSLFDLMPEKNVVTW 195
Query: 541 TAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIR 720
TAMVTGYS+ KDLE AR++FD+MPE++VVSWNAM+SGYAQNG EE + LF+E++S +
Sbjct: 196 TAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCAEEVIKLFNEMMSCEVC 255
Query: 721 PDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
PDETTWV VIS CSS D LA +VKMIN+KG+R
Sbjct: 256 PDETTWVTVISLCSSHGDVSLAEGLVKMINEKGVR 290
Score = 117 bits (294), Expect = 4e-24
Identities = 72/222 (32%), Positives = 120/222 (54%), Gaps = 6/222 (2%)
Frame = +1
Query: 112 AVSIFNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKP-DAFVYPLLIKSAG 288
A S+F+ E NV +T M+ +SRR + FD+M + V +A +
Sbjct: 180 ARSLFDLMPEKNVVTWTAMVTGYSRRKDLENARKYFDQMPERSVVSWNAMLSGYAQNGCA 239
Query: 289 KAGIAFHAHLLKVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVA----DWNSI 456
+ I ++ + D+ ++ L +G + A L I EK V ++
Sbjct: 240 EEVIKLFNEMMSCEVCPDETTWVTVISLCSSHGDVSLAEGLVKMINEKGVRLNCFAKTAL 299
Query: 457 ISGYWNWGNEVEAKKLFD-LMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSW 633
+ Y GN A+K+FD L K+++TW AM++ Y+++ DL AR FD++PEK V+SW
Sbjct: 300 LDMYAKCGNLAMARKIFDELGTYKNLVTWNAMISAYARVGDLASARGLFDKVPEKNVISW 359
Query: 634 NAMISGYAQNGFTEEAVTLFSEVLSAGIRPDETTWVAVISSC 759
N++I+GYAQNG ++ A+ LF ++++ + PDE T V+VIS+C
Sbjct: 360 NSIIAGYAQNGESKVAIDLFKDMIAKDVLPDEVTMVSVISAC 401
Score = 92.0 bits (227), Expect = 2e-16
Identities = 71/289 (24%), Positives = 116/289 (40%), Gaps = 76/289 (26%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPL----------- 270
F+ E +V + ML +++ G +V+ LF+ M +V PD +
Sbjct: 215 FDQMPERSVVSWNAMLSGYAQNGCAEEVIKLFNEMMSCEVCPDETTWVTVISLCSSHGDV 274
Query: 271 -----LIKSAGKAGIAFHAHLLKVGLD---------------------RDKYICNVIMDL 372
L+K + G+ + LD ++ N ++
Sbjct: 275 SLAEGLVKMINEKGVRLNCFAKTALLDMYAKCGNLAMARKIFDELGTYKNLVTWNAMISA 334
Query: 373 YGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVIT----- 537
Y + G + +AR LFD++PEKNV WNSII+GY G A LF M KDV+
Sbjct: 335 YARVGDLASARGLFDKVPEKNVISWNSIIAGYAQNGESKVAIDLFKDMIAKDVLPDEVTM 394
Query: 538 ----------------------------------WTAMVTGYSKMKDLERARRFFDEMPE 615
+ A++ YSK +++ A + F M
Sbjct: 395 VSVISACGHLGALEFGNWAVNFLEKHQIKLSISGYNALIFMYSKCGNMKDAEKVFQSMEA 454
Query: 616 KTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIRPDETTWVAVISSCS 762
+ V+S+N +I+G A G EAV L ++ I PD T++ V+++CS
Sbjct: 455 RDVISYNTLITGVAAYGNAIEAVELLWKMKKENIEPDRITYIGVLTACS 503
Score = 67.0 bits (162), Expect = 8e-09
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Frame = +1
Query: 112 AVSIFNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGK 291
A +F+ E NV + +++ +++ G + LF M DV PD +I + G
Sbjct: 344 ARGLFDKVPEKNVISWNSIIAGYAQNGESKVAIDLFKDMIAKDVLPDEVTMVSVISACGH 403
Query: 292 AGIA---------FHAHLLKVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVAD 444
G H +K+ + N ++ +Y K G ++ A ++F + ++V
Sbjct: 404 LGALEFGNWAVNFLEKHQIKLSISG----YNALIFMYSKCGNMKDAEKVFQSMEARDVIS 459
Query: 445 WNSIISGYWNWGNEVEAKKLFDLMP----EKDVITWTAMVTGYSKMKDLERARRFFDEMP 612
+N++I+G +GN +EA +L M E D IT+ ++T S L+ +R FD +
Sbjct: 460 YNTLITGVAAYGNAIEAVELLWKMKKENIEPDRITYIGVLTACSHGGLLKEGQRIFDSIK 519
Query: 613 EKTVVSWNAMISGYAQNGFTEEAVTLFSEV 702
+ + M+ +NG +EA L +
Sbjct: 520 DPDSDHYACMVDLLGRNGKLDEAKCLIGSM 549
>ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 352 bits (903), Expect = 9e-95
Identities = 166/277 (59%), Positives = 218/277 (78%), Gaps = 2/277 (0%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
+Q HA +I NSL HH NYWVALLI+ CTR+ APP Y +FNS PNVFVFT+ML+F+
Sbjct: 18 RQLHAQIIHNSL--HHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFY 75
Query: 181 SRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNV 360
S + V+ ++++MQ V+PDAFVYP+LIKSAG GI FHAH+LK+G D ++ N
Sbjct: 76 SHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVLKLGHGSDAFVRNA 135
Query: 361 IMDLYGKYGPIETARELFDEIP--EKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVI 534
++D+Y + GPI AR++FDEIP E+ VADWN+++SGYW W +E +A+ LFD+MPE++VI
Sbjct: 136 VIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVI 195
Query: 535 TWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAG 714
TWTAMVTGY+K+KDLE ARR+FD MPE++VVSWNAM+SGYAQNG EEA+ LF E+++AG
Sbjct: 196 TWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAG 255
Query: 715 IRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
I PDETTWV VIS+CSSR DP LA S+V+ ++ K I+
Sbjct: 256 IEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQ 292
Score = 114 bits (285), Expect = 4e-23
Identities = 77/278 (27%), Positives = 126/278 (45%), Gaps = 45/278 (16%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E +V + ML +++ G + L LFD M ++PD + +I + G
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276
Query: 304 FHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
A L L + + ++ ++D+Y K+G +++AR+LF+ +P +NV WNS+I+GY
Sbjct: 277 CLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGY 336
Query: 469 WNWGNEVEAKKLFDLMPEKDVIT-----------------------WT------------ 543
G A +LF M +T W
Sbjct: 337 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLS 396
Query: 544 -----AMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLS 708
AM+ YS+ +E A+R F EM + VVS+N +ISG+A +G EA+ L S +
Sbjct: 397 ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKE 456
Query: 709 AGIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGI 822
GI PD T++ V+++CS + V + I D I
Sbjct: 457 GGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAI 494
>emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 352 bits (902), Expect = 1e-94
Identities = 166/277 (59%), Positives = 216/277 (77%), Gaps = 2/277 (0%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
+Q HA +I NSL HH NYWVALLI+ CTR+ APP Y +FNS PNVFVFT+ML+F+
Sbjct: 18 RQLHAQIIHNSL--HHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSMLRFY 75
Query: 181 SRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNV 360
S + V+ +F+ MQ V+PDAFVYP+LIKSAG GI FHAH+LK+G D ++ N
Sbjct: 76 SHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGIGFHAHVLKLGHGSDAFVRNA 135
Query: 361 IMDLYGKYGPIETARELFDEIP--EKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVI 534
++D+Y + GPI AR++FDEIP E+ VADWN+++SGYW W +E +A+ LFD+MPE++VI
Sbjct: 136 VIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVI 195
Query: 535 TWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAG 714
TWTAMVTGY+K+KDLE ARR+FD MPE++VVSWNAM+SGYAQNG EE + LF E+++AG
Sbjct: 196 TWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAG 255
Query: 715 IRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
I PDETTWV VIS+CSSR DP LA S+V+ ++ K I+
Sbjct: 256 IEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQ 292
Score = 113 bits (283), Expect = 7e-23
Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 6/240 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E +V + ML +++ G +VL LFD M ++PD + +I + G
Sbjct: 217 FDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDP 276
Query: 304 FHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
A L L + + ++ ++D+Y K G I AR +FDE+ Y
Sbjct: 277 CLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDEL------------GAY 324
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
N +TW AM++ Y+++ +L+ AR F+ MP + VV+WN+MI+
Sbjct: 325 RN------------------SVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIA 366
Query: 649 GYAQNGFTEEAVTLFSEVLSA-GIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
GYAQNG + A+ LF E+++A + PDE T V+VIS+C +L VV+ + + I+
Sbjct: 367 GYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIK 426
Score = 103 bits (256), Expect = 1e-19
Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 42/274 (15%)
Frame = +1
Query: 127 NSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAF 306
N+ EP+ + ++ S RG +L + + ++ + FV L+ K G
Sbjct: 253 NAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIG 312
Query: 307 HAHLL--KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWG 480
A + ++G R+ N ++ Y + G +++ARELF+ +P +NV WNS+I+GY G
Sbjct: 313 AARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNG 372
Query: 481 NEVEAKKLFDLMPEKDVIT-----------------------WT---------------- 543
A +LF M +T W
Sbjct: 373 QSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGH 432
Query: 544 -AMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIR 720
AM+ YS+ +E A+R F EM + VVS+N +ISG+A +G EA+ L S + GI
Sbjct: 433 NAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIE 492
Query: 721 PDETTWVAVISSCSSRADPDLAGSVVKMINDKGI 822
PD T++ V+++CS + V + I D I
Sbjct: 493 PDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAI 526
>ref|XP_004300036.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Fragaria vesca subsp. vesca]
Length = 764
Score = 338 bits (866), Expect = 2e-90
Identities = 154/275 (56%), Positives = 215/275 (78%), Gaps = 3/275 (1%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
+Q HAHL Q S+ HHQN+WV+ LI+ CTR+ APPPY IF+S PN+ VFT+ML+F+
Sbjct: 20 RQLHAHLFQKSV--HHQNHWVSFLINQCTRLRAPPPYTRLIFDSTPHPNIHVFTSMLQFY 77
Query: 181 SRRGA--QSDVLALFDRMQKL-DVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYI 351
+ G + V++L+ +MQ+ D+ FVYPLLIKS+G AGIAFHAH++K+GL D+Y+
Sbjct: 78 APLGNVYSNQVVSLYQQMQRREDIWLGTFVYPLLIKSSGLAGIAFHAHVVKLGLVSDRYV 137
Query: 352 CNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDV 531
N +M +Y KYGP+E AR++F+E+PE+++ DWN+++SGYW WG++VEA KLFD+MPEKDV
Sbjct: 138 RNAVMSVYSKYGPVEHARKVFEEMPERSLVDWNNMVSGYWKWGDKVEACKLFDMMPEKDV 197
Query: 532 ITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSA 711
++WTAMVTGY++MKDLE ARR FD++PEK VVSWNAM+S YAQNG EEA+ LF +++ +
Sbjct: 198 VSWTAMVTGYARMKDLENARRCFDDVPEKNVVSWNAMLSAYAQNGCPEEALRLFDDMMDS 257
Query: 712 GIRPDETTWVAVISSCSSRADPDLAGSVVKMINDK 816
G++P+ETTW VIS+CSS D + S ++ +N K
Sbjct: 258 GVQPNETTWAVVISACSSCGDSSVVDSFIQKLNQK 292
Score = 108 bits (270), Expect = 2e-21
Identities = 72/241 (29%), Positives = 114/241 (47%), Gaps = 6/241 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E NV + ML +++ G + L LFD M V+P+ + ++I + G +
Sbjct: 220 FDDVPEKNVVSWNAMLSAYAQNGCPEEALRLFDDMMDSGVQPNETTWAVVISACSSCGDS 279
Query: 304 -----FHAHLLKVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
F L + + + ++D+Y K G IE ARE+FDE+ G
Sbjct: 280 SVVDSFIQKLNQKRMHLSYFGKTAMLDMYAKRGSIERAREVFDEL-------------GV 326
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
+ K TW AM++ Y+++ DL AR FD+M E+ V+SWN+MIS
Sbjct: 327 Y-----------------KSSGTWNAMISAYARVGDLTSARELFDKMLERDVISWNSMIS 369
Query: 649 GYAQNGFTEEAVTLFSEV-LSAGIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
GYAQNG + A+ LF ++ S +P+E T +VIS+C ++ V + I
Sbjct: 370 GYAQNGQSALAIDLFKDMTASNNPKPNEVTMASVISACGHLGALEIGNWAVNFLTKHHIN 429
Query: 826 P 828
P
Sbjct: 430 P 430
>ref|NP_172899.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806395|sp|Q9M9R6.2|PPR43_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g14470 gi|332191047|gb|AEE29168.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 540
Score = 317 bits (813), Expect = 3e-84
Identities = 148/274 (54%), Positives = 207/274 (75%)
Frame = +1
Query: 4 QFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFHS 183
Q HA LI + SL Q+YW + +I CTR+ AP Y IF+S PNVFV +M K+ S
Sbjct: 24 QIHAQLIVFN-SLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFS 82
Query: 184 RRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNVI 363
+ +DVL L+++ + + PDAF +P++IKSAG+ GI F A + K+G +D Y+ NVI
Sbjct: 83 KMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVI 142
Query: 364 MDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVITWT 543
MD+Y K+ +E+AR++FD+I ++ +DWN +ISGYW WGN+ EA KLFD+MPE DV++WT
Sbjct: 143 MDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWT 202
Query: 544 AMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIRP 723
M+TG++K+KDLE AR++FD MPEK+VVSWNAM+SGYAQNGFTE+A+ LF+++L G+RP
Sbjct: 203 VMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRP 262
Query: 724 DETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
+ETTWV VIS+CS RADP L S+VK+I++K +R
Sbjct: 263 NETTWVIVISACSFRADPSLTRSLVKLIDEKRVR 296
Score = 113 bits (283), Expect = 7e-23
Identities = 70/248 (28%), Positives = 128/248 (51%), Gaps = 14/248 (5%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAG-KAGI 300
F+ E +V + ML +++ G D L LF+ M +L V+P+ + ++I + +A
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 301 AFHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISG 465
+ L+K+ +D + ++ ++D++ K I++AR +F+E
Sbjct: 281 SLTRSLVKL-IDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNE--------------- 324
Query: 466 YWNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMI 645
L +++++TW AM++GY+++ D+ AR+ FD MP++ VVSWN++I
Sbjct: 325 ---------------LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLI 369
Query: 646 SGYAQNGFTEEAVTLFSEVLSAG-IRPDETTWVAVISSCSSRADPDLAGSVVKMI----- 807
+GYA NG A+ F +++ G +PDE T ++V+S+C AD +L +V I
Sbjct: 370 AGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQI 429
Query: 808 --NDKGIR 825
ND G R
Sbjct: 430 KLNDSGYR 437
>ref|XP_002890056.1| hypothetical protein ARALYDRAFT_888825 [Arabidopsis lyrata subsp.
lyrata] gi|297335898|gb|EFH66315.1| hypothetical protein
ARALYDRAFT_888825 [Arabidopsis lyrata subsp. lyrata]
Length = 790
Score = 316 bits (810), Expect = 6e-84
Identities = 149/276 (53%), Positives = 208/276 (75%), Gaps = 2/276 (0%)
Frame = +1
Query: 4 QFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFHS 183
Q HAHLI ++ SLH Q+YW + LI CTR+ APP YA +F+S PNVF+ +M ++ S
Sbjct: 24 QIHAHLIVSN-SLHRQSYWASRLISCCTRLRAPPYYARLVFDSVTFPNVFLVNSMFRYFS 82
Query: 184 RRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNVI 363
+ +D L L+++ + + PD F +P++IKSAGK G+ F A + K+G+ +D Y+ NVI
Sbjct: 83 QMDMANDALRLYEQRSRCGIMPDTFFFPVVIKSAGKFGVLFQALVEKMGIFKDPYVRNVI 142
Query: 364 MDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEK--DVIT 537
MD+Y K+ +E+AR++FD+I + +DWN +ISGYW +GN+ EA KLFD+MPE DV++
Sbjct: 143 MDMYAKHESVESARKVFDQITHRKGSDWNVMISGYWKYGNKEEACKLFDMMPEGKIDVVS 202
Query: 538 WTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGI 717
WT M+TG++K+KDLE ARR FD MPEK+VVSWNAM+SGY+QNGFTEE + LF+++L G+
Sbjct: 203 WTVMITGFAKLKDLENARRCFDCMPEKSVVSWNAMLSGYSQNGFTEETLRLFNDMLRLGV 262
Query: 718 RPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
RP+ETTWV VIS+CS RADP LA S+VK+I +K IR
Sbjct: 263 RPNETTWVIVISACSFRADPSLAHSLVKLIGEKRIR 298
Score = 112 bits (280), Expect = 2e-22
Identities = 69/240 (28%), Positives = 122/240 (50%), Gaps = 6/240 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E +V + ML +S+ G + L LF+ M +L V+P+ + ++I +
Sbjct: 223 FDCMPEKSVVSWNAMLSGYSQNGFTEETLRLFNDMLRLGVRPNETTWVIVISACSFRADP 282
Query: 304 FHAHLLK--VGLDRDK---YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
AH L +G R + ++ ++D++ K I +AR +F+E
Sbjct: 283 SLAHSLVKLIGEKRIRLNFFVKTALLDMHAKCRDILSARRIFNE---------------- 326
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
L +K+++TW AM++GY+++ D+ AR+ FD MP++ VVSWN++I+
Sbjct: 327 --------------LGTQKNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSVIA 372
Query: 649 GYAQNGFTEEAVTLFSEVLSAG-IRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
GYA NG A+ F +++ G +PDE T ++V+S+C D +L +V I K I+
Sbjct: 373 GYAHNGQPALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMGDLELGDCIVDYIGKKQIK 432
>ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 308 bits (789), Expect = 2e-81
Identities = 149/274 (54%), Positives = 200/274 (72%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
+QFH HL+ NSL H NYWV+LL+ CTR+HA P Y SIF S+ P+ V++ MLK++
Sbjct: 18 RQFHGHLVHNSL--HSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYY 75
Query: 181 SRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNV 360
SR GA + V++LF L+++P FVY LIK AGK+G FHA++LK+G D +I N
Sbjct: 76 SRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNMFHAYVLKLGHIDDHFIRNA 135
Query: 361 IMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVITW 540
I+D+Y K G ++ AR LF+++ E+ +ADWNS+ISG W GNE EA LF++MP +++ITW
Sbjct: 136 ILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITW 195
Query: 541 TAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIR 720
T+MVTGY+KM DLE ARR+FDEMPE++VVSWNAM S YAQ +EA+ LF ++L GI
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255
Query: 721 PDETTWVAVISSCSSRADPDLAGSVVKMINDKGI 822
PD+TTWV ISSCSS DP LA S+++MI+ K I
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Score = 107 bits (267), Expect = 5e-21
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 6/240 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E +V + M ++++ + L LF +M + + PD + + I S G
Sbjct: 215 FDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDP 274
Query: 304 FHAHLLKVGLDRDKYICN-----VIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
A + +D+ + N ++D++ K+G +E AR +FDE+
Sbjct: 275 TLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGS------------- 321
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
+++ +TW M++ Y+++ L AR FD MP++ VVSWN+MI+
Sbjct: 322 -----------------QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIA 364
Query: 649 GYAQNGFTEEAVTLFSEVLSA-GIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
GYAQNG + ++ LF E++S I+PDE T +V+S+C L+ V+ ++ +K I+
Sbjct: 365 GYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIK 424
Score = 89.7 bits (221), Expect = 1e-15
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 40/187 (21%)
Frame = +1
Query: 322 KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKK 501
++G R+ N+++ Y + G + ARELFD +P+++V WNS+I+GY G + +
Sbjct: 318 ELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIE 377
Query: 502 LF-------DLMPEKDVIT---------------------------------WTAMVTGY 561
LF D+ P++ I + +++ Y
Sbjct: 378 LFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMY 437
Query: 562 SKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIRPDETTWV 741
SK + A R F M + VVS+N +ISG+A NG +EA+ L + GI PD T++
Sbjct: 438 SKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYI 497
Query: 742 AVISSCS 762
V+++CS
Sbjct: 498 GVLTACS 504
>ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 308 bits (789), Expect = 2e-81
Identities = 149/274 (54%), Positives = 200/274 (72%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
+QFH HL+ NSL H NYWV+LL+ CTR+HA P Y SIF S+ P+ V++ MLK++
Sbjct: 18 RQFHGHLVHNSL--HSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVYSCMLKYY 75
Query: 181 SRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNV 360
SR GA + V++LF L+++P FVY LIK AGK+G FHA++LK+G D +I N
Sbjct: 76 SRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLFHAYVLKLGHIDDHFIRNA 135
Query: 361 IMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVITW 540
I+D+Y K G ++ AR LF+++ E+ +ADWNS+ISG W GNE EA LF++MP +++ITW
Sbjct: 136 ILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITW 195
Query: 541 TAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIR 720
T+MVTGY+KM DLE ARR+FDEMPE++VVSWNAM S YAQ +EA+ LF ++L GI
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255
Query: 721 PDETTWVAVISSCSSRADPDLAGSVVKMINDKGI 822
PD+TTWV ISSCSS DP LA S+++MI+ K I
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHI 289
Score = 107 bits (267), Expect = 5e-21
Identities = 65/240 (27%), Positives = 118/240 (49%), Gaps = 6/240 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E +V + M ++++ + L LF +M + + PD + + I S G
Sbjct: 215 FDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDP 274
Query: 304 FHAHLLKVGLDRDKYICN-----VIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
A + +D+ + N ++D++ K+G +E AR +FDE+
Sbjct: 275 TLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGS------------- 321
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
+++ +TW M++ Y+++ L AR FD MP++ VVSWN+MI+
Sbjct: 322 -----------------QRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIA 364
Query: 649 GYAQNGFTEEAVTLFSEVLSA-GIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
GYAQNG + ++ LF E++S I+PDE T +V+S+C L+ V+ ++ +K I+
Sbjct: 365 GYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIK 424
Score = 89.7 bits (221), Expect = 1e-15
Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 40/187 (21%)
Frame = +1
Query: 322 KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKK 501
++G R+ N+++ Y + G + ARELFD +P+++V WNS+I+GY G + +
Sbjct: 318 ELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIE 377
Query: 502 LF-------DLMPEKDVIT---------------------------------WTAMVTGY 561
LF D+ P++ I + +++ Y
Sbjct: 378 LFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMY 437
Query: 562 SKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIRPDETTWV 741
SK + A R F M + VVS+N +ISG+A NG +EA+ L + GI PD T++
Sbjct: 438 SKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYI 497
Query: 742 AVISSCS 762
V+++CS
Sbjct: 498 GVLTACS 504
>gb|ESW20590.1| hypothetical protein PHAVU_006G221900g [Phaseolus vulgaris]
Length = 638
Score = 303 bits (777), Expect = 4e-80
Identities = 152/277 (54%), Positives = 200/277 (72%), Gaps = 2/277 (0%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
+Q HA L+ +S HH+N+WVALL+ CTR+ AP Y IF+ A PN VFT MLK++
Sbjct: 20 RQLHAQLVLHSQ--HHRNHWVALLLTQCTRLLAPSNYTWHIFHVATYPNAHVFTCMLKYY 77
Query: 181 SRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNV 360
S+ A +++++ F +Q D+KPDA YP+LIKSAGKA HAHLLK+G RD + N
Sbjct: 78 SQICASTELVSFFKHIQYCDIKPDASFYPILIKSAGKASALLHAHLLKLGHCRDHLVRNA 137
Query: 361 IMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPE--KDVI 534
IM Y KYG IE AR+LFDE+ + ADWN IISGYW GNE EA +LF M E ++VI
Sbjct: 138 IMVTYAKYGHIEVARKLFDEMLYRTTADWNVIISGYWKCGNEYEASRLFCTMGESKRNVI 197
Query: 535 TWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAG 714
TWT MVTG++KM++L+ AR +FDEMPE++VVSWNAM+SGYAQ+G +E ++LF+++LS+G
Sbjct: 198 TWTTMVTGHAKMRNLKAARIYFDEMPERSVVSWNAMLSGYAQSGAAQETLSLFNDMLSSG 257
Query: 715 IRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
PDETTWV V+SSCSS DP LA S+VK ++ R
Sbjct: 258 NEPDETTWVTVLSSCSSLGDPSLAESIVKKLDKMSFR 294
Score = 105 bits (263), Expect = 2e-20
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 6/240 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E +V + ML +++ GA + L+LF+ M +PD + ++ S G
Sbjct: 219 FDEMPERSVVSWNAMLSGYAQSGAAQETLSLFNDMLSSGNEPDETTWVTVLSSCSSLGDP 278
Query: 304 FHAHLLKVGLDRDKYICN-----VIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
A + LD+ + N ++D++ K G +E A+++FD++ G
Sbjct: 279 SLAESIVKKLDKMSFRSNYFVKTALLDMHAKCGNLELAQKIFDQL-------------GL 325
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
+ K +TW AM++ Y+++ +L AR F+ MPE+ VSWN+MI+
Sbjct: 326 Y-----------------KTSVTWNAMISAYARVGNLSLARDLFNTMPERDTVSWNSMIA 368
Query: 649 GYAQNGFTEEAVTLFSEVLSA-GIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
GYAQNG + +A+ LF E++S+ +PDE T V V S+C L V ++++ I+
Sbjct: 369 GYAQNGESLKAIKLFKEMMSSKDSKPDEVTMVTVFSACGHLGRLGLGNWAVSILSENHIK 428
Score = 98.6 bits (244), Expect = 2e-18
Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 46/262 (17%)
Frame = +1
Query: 115 VSIFN----SAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKS 282
+S+FN S +EP+ + +L S G S ++ ++ K+ + + FV L+
Sbjct: 247 LSLFNDMLSSGNEPDETTWVTVLSSCSSLGDPSLAESIVKKLDKMSFRSNYFVKTALLDM 306
Query: 283 AGKAGIAFHAHLL--KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSI 456
K G A + ++GL + N ++ Y + G + AR+LF+ +PE++ WNS+
Sbjct: 307 HAKCGNLELAQKIFDQLGLYKTSVTWNAMISAYARVGNLSLARDLFNTMPERDTVSWNSM 366
Query: 457 ISGYWNWGNEVEAKKLF-DLMPEKD----------------------------------- 528
I+GY G ++A KLF ++M KD
Sbjct: 367 IAGYAQNGESLKAIKLFKEMMSSKDSKPDEVTMVTVFSACGHLGRLGLGNWAVSILSENH 426
Query: 529 ----VITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFS 696
+ + A++ Y + LE AR F +M + +VS+N +ISG A +G E+ L S
Sbjct: 427 IKLSISGYNALIFMYLRCGSLEDARIIFQKMATRDLVSYNTLISGLAAHGHGTESFRLMS 486
Query: 697 EVLSAGIRPDETTWVAVISSCS 762
++ GI PD T++ V+++CS
Sbjct: 487 KMREGGIEPDRITYIGVLTACS 508
>ref|XP_006307192.1| hypothetical protein CARUB_v10008784mg [Capsella rubella]
gi|482575903|gb|EOA40090.1| hypothetical protein
CARUB_v10008784mg [Capsella rubella]
Length = 543
Score = 303 bits (777), Expect = 4e-80
Identities = 143/276 (51%), Positives = 205/276 (74%), Gaps = 2/276 (0%)
Frame = +1
Query: 4 QFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFHS 183
Q HA LI + L +++W + LI CTR+ APP Y +F+S PNVFV T+M K+ S
Sbjct: 24 QIHAQLIVFNF-LSRKSFWASRLISCCTRLRAPPYYTRLVFDSVAFPNVFVVTSMYKYLS 82
Query: 184 RRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNVI 363
R D L L+++ + + PDA+ +P++IKSAG+ G+ F A + K+G +D Y+ NVI
Sbjct: 83 RMDMADDALRLYEQRSRCGILPDAWSFPVVIKSAGEFGVLFQAIVEKLGFFKDPYVRNVI 142
Query: 364 MDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEK--DVIT 537
MD+Y K+ +++AR++FD+I + +DWN +ISGYW WGN+ EA KLFD+MPE DV++
Sbjct: 143 MDMYVKHESVQSARKVFDQITHRVGSDWNVMISGYWKWGNKEEACKLFDMMPENDTDVVS 202
Query: 538 WTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGI 717
WT M+TG++K+KDLE AR++FD MPEK+VVSWNAM+SGYAQNGFTEE + LF+++L G+
Sbjct: 203 WTVMITGFAKLKDLENARKYFDLMPEKSVVSWNAMLSGYAQNGFTEETIRLFNDMLRFGV 262
Query: 718 RPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
+P+ETTWV VIS+CS RADP LA S+VK+I+++ +R
Sbjct: 263 KPNETTWVIVISACSLRADPSLAHSLVKLIHEQRVR 298
Score = 113 bits (283), Expect = 7e-23
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 6/240 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E +V + ML +++ G + + LF+ M + VKP+ + ++I +
Sbjct: 223 FDLMPEKSVVSWNAMLSGYAQNGFTEETIRLFNDMLRFGVKPNETTWVIVISACSLRADP 282
Query: 304 FHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
AH L + + Y+ ++D++ K I +AR +F+E
Sbjct: 283 SLAHSLVKLIHEQRVRLNCYVKTALLDMHAKCRDILSARRIFNE---------------- 326
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
L +K+++TW AM++GY+++ DL AR+ FD MPE+ +VSWN+MI+
Sbjct: 327 --------------LGTQKNLVTWNAMISGYTRIGDLTSARQLFDIMPERNIVSWNSMIA 372
Query: 649 GYAQNGFTEEAVTLFSEVLSAG-IRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
GYA NG A+ F E++ G +PDE T ++V+S+C D +L +V I+ I+
Sbjct: 373 GYAHNGQPALAIEFFEEMIDYGDSKPDEVTMISVLSACGHMGDLELGNCIVDYISKNQIK 432
>ref|XP_006575401.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 640
Score = 303 bits (775), Expect = 6e-80
Identities = 155/279 (55%), Positives = 200/279 (71%), Gaps = 4/279 (1%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
+Q HA L+ +S HH N+WVALL+ CT + AP Y IF +A PNV VFT MLK++
Sbjct: 20 RQLHAQLVLHSQ--HHHNHWVALLLTQCTHLLAPSNYTSHIFRAATYPNVHVFTCMLKYY 77
Query: 181 SRRGAQSDVL-ALFDRMQKL-DVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYIC 354
S+ GA + V+ +LF MQ D+KP YP+LIKSAGKAG+ HA+LLK+G D ++
Sbjct: 78 SQIGATTQVVVSLFKHMQYYNDIKPYTSFYPVLIKSAGKAGMLLHAYLLKLGHSHDHHVR 137
Query: 355 NVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLM--PEKD 528
N IM +Y KYG IE AR+LFDE+P++ ADWN IISGYW GNE EA +LF +M EK+
Sbjct: 138 NAIMGIYAKYGCIELARKLFDEMPDRTAADWNVIISGYWKCGNEKEATRLFCMMGESEKN 197
Query: 529 VITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLS 708
VITWT MVTG++KM++LE AR +FDEMPE+ V SWNAM+SGYAQ+G +E V LF ++LS
Sbjct: 198 VITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLS 257
Query: 709 AGIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
+G PDETTWV V+SSCSS DP LA S+V+ ++ R
Sbjct: 258 SGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFR 296
Score = 108 bits (271), Expect = 2e-21
Identities = 69/240 (28%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E V + ML +++ GA + + LFD M +PD + ++ S G
Sbjct: 221 FDEMPERRVASWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDP 280
Query: 304 FHAHLLKVGLDRDKYICN-----VIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
A + LDR + N ++D++ K G +E A+++F+++ G
Sbjct: 281 CLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQL-------------GV 327
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
+ K+ +TW AM++ Y+++ DL AR F++MPE+ VSWN+MI+
Sbjct: 328 Y-----------------KNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIA 370
Query: 649 GYAQNGFTEEAVTLFSEVLSA-GIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
GYAQNG + +A+ LF E++S+ +PDE T V+V S+C L V ++++ I+
Sbjct: 371 GYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIK 430
Score = 94.4 bits (233), Expect = 5e-17
Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 42/256 (16%)
Frame = +1
Query: 121 IFNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGI 300
+ +S +EP+ + +L S G ++ ++ +++ + + FV L+ K G
Sbjct: 255 MLSSGNEPDETTWVTVLSSCSSLGDPCLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGN 314
Query: 301 AFHAHLL--KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWN 474
A + ++G+ ++ N ++ Y + G + AR+LF+++PE+N WNS+I+GY
Sbjct: 315 LEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLFNKMPERNTVSWNSMIAGYAQ 374
Query: 475 WGNEVEAKKLF-DLMPEKD---------------------------------------VI 534
G ++A +LF +++ KD +
Sbjct: 375 NGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRLGLGNWAVSILHENHIKLSIS 434
Query: 535 TWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAG 714
+ +++ Y + +E AR F EM K +VS+N +ISG A +G E++ L S++ G
Sbjct: 435 GYNSLIFMYLRCGSMEDARITFQEMATKDLVSYNTLISGLAAHGHGTESIKLMSKMKEDG 494
Query: 715 IRPDETTWVAVISSCS 762
I PD T++ V+++CS
Sbjct: 495 IGPDRITYIGVLTACS 510
>ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 632
Score = 293 bits (749), Expect = 7e-77
Identities = 148/272 (54%), Positives = 198/272 (72%), Gaps = 8/272 (2%)
Frame = +1
Query: 37 SLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFHSRRGAQSDV-LA 213
SLHHQN+WV LL+ CTR AP Y IF++A P+V VFT MLK++S+ G S V ++
Sbjct: 15 SLHHQNHWVVLLLTQCTRFLAPSSYTCHIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVS 74
Query: 214 LFDRM-QKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNVIMDLYGKYGP 390
LF M Q D+KP+A Y +++KSAG + F AH+LK G DRD Y+ N I+ +Y KYGP
Sbjct: 75 LFKHMLQHCDIKPNASFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGP 134
Query: 391 IETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPE----KDVITWTAMVTG 558
IE AR+LFDE+P++ VADWN +ISGYW GNE EA LF +M + ++VITWT M+TG
Sbjct: 135 IEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITG 194
Query: 559 YSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAG-IRPDETT 735
++K +L+ AR +FD+MPE++VVSWNAM+SGYAQ G EE + LF+++LS G ++PDETT
Sbjct: 195 HAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETT 254
Query: 736 WVAVISSCSSRADPDLAGSVVKMINDK-GIRP 828
W VISSCSS DP L+ S+V+ ++DK G RP
Sbjct: 255 WATVISSCSSLGDPCLSESIVRKLDDKVGFRP 286
Score = 102 bits (254), Expect = 2e-19
Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 9/237 (3%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALF-DRMQKLDVKPDAFVYPLLIKSAGKAGI 300
F+ E +V + ML +++ GA + + LF D + +V+PD + +I S G
Sbjct: 208 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD 267
Query: 301 AFHAHLL------KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIIS 462
+ + KVG + ++ ++D++ K G +E A ++F+++
Sbjct: 268 PCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL------------- 314
Query: 463 GYWNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAM 642
G + + + V W AM++ Y+++ DL A+ FD+MP++ VSWN+M
Sbjct: 315 GVYKYRSSVP---------------WNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSM 359
Query: 643 ISGYAQNGFTEEAVTLFSEVLSA--GIRPDETTWVAVISSCSSRADPDLAGSVVKMI 807
I+GY QNG + +A+ LF E++S+ +PDE T V+V S+C + L V ++
Sbjct: 360 IAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSIL 416
Score = 92.4 bits (228), Expect = 2e-16
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 45/222 (20%)
Frame = +1
Query: 232 KLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYIC----NVIMDLYGKYGPIET 399
K+ +P+ FV L+ K G AH + L KY N ++ Y + G + +
Sbjct: 281 KVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPS 340
Query: 400 ARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKD----------------- 528
A+ LFD++P+++ WNS+I+GY G +A KLF+ M +
Sbjct: 341 AKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSAC 400
Query: 529 ------------------------VITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWN 636
+ + +++ YS+ ++ A F EM + +VS+N
Sbjct: 401 GHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYN 460
Query: 637 AMISGYAQNGFTEEAVTLFSEVLSAGIRPDETTWVAVISSCS 762
+ISG+A++G E++ L S++ GI PD T++A++++CS
Sbjct: 461 TLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACS 502
>ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 646
Score = 292 bits (748), Expect = 9e-77
Identities = 148/284 (52%), Positives = 206/284 (72%), Gaps = 8/284 (2%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFH 180
+Q HA L+ +SL HHQN+WV LL+ CTR+ AP Y IF++A P+V VFT MLK++
Sbjct: 20 RQLHAQLVHHSL--HHQNHWVVLLLTQCTRLLAPSSYTCHIFHAATHPDVRVFTFMLKYY 77
Query: 181 SRRGAQSDV-LALFDRMQK-LDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYIC 354
S+ G ++ V ++LF M + ++KP+ Y +++KSAG + F AH+LK G DRD Y+
Sbjct: 78 SQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLAHVLKSGYDRDHYVR 137
Query: 355 NVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPE---- 522
N I+ +Y KYGPIE AR+LFDE+P++ VADWN +ISGYW GNE EA LF +M +
Sbjct: 138 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 197
Query: 523 KDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEV 702
++VITWT M+TG++K +L+ AR +FD+MPE++VVSWNAM+SGYAQ G EE + LF+++
Sbjct: 198 RNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDM 257
Query: 703 LSAG-IRPDETTWVAVISSCSSRADPDLAGSVVKMINDK-GIRP 828
LS G ++PDETTWV VISSCSS DP L+ S+V+ ++D G RP
Sbjct: 258 LSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRP 301
Score = 103 bits (257), Expect = 7e-20
Identities = 65/242 (26%), Positives = 120/242 (49%), Gaps = 8/242 (3%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALF-DRMQKLDVKPDAFVYPLLIKSAGKAGI 300
F+ E +V + ML +++ GA + + LF D + +V+PD + +I S G
Sbjct: 223 FDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGD 282
Query: 301 AFHAHLL------KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIIS 462
+ + VG + ++ ++D++ K G +E A ++F+++
Sbjct: 283 PCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL------------- 329
Query: 463 GYWNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAM 642
G + + + V W AM++ Y+++ DL AR FD+MP++ VSWN+M
Sbjct: 330 GVYKYRSSVP---------------WNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSM 374
Query: 643 ISGYAQNGFTEEAVTLFSEVLSA-GIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKG 819
I+GY QNG + +A+ LF E++S+ +PDE T V+V S+C + L V ++ +
Sbjct: 375 IAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENH 434
Query: 820 IR 825
I+
Sbjct: 435 IQ 436
Score = 92.8 bits (229), Expect = 1e-16
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 48/227 (21%)
Frame = +1
Query: 226 MQKLD----VKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYIC----NVIMDLYGK 381
++KLD +P+ FV L+ K G AH + L KY N ++ Y +
Sbjct: 290 VRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYAR 349
Query: 382 YGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKD----------- 528
G + +AR LFD++P+++ WNS+I+GY G V+A KLF+ M +
Sbjct: 350 VGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVS 409
Query: 529 -----------------------------VITWTAMVTGYSKMKDLERARRFFDEMPEKT 621
+ + ++++ YS+ ++ A F EM +
Sbjct: 410 VFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRD 469
Query: 622 VVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIRPDETTWVAVISSCS 762
+VS+N +ISG+A++G E++ L ++ GI PD T++A++++CS
Sbjct: 470 LVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACS 516
>gb|EOY26402.1| Pentatricopeptide repeat superfamily protein isoform 2 [Theobroma
cacao] gi|508779147|gb|EOY26403.1| Pentatricopeptide
repeat superfamily protein isoform 2 [Theobroma cacao]
Length = 777
Score = 281 bits (718), Expect = 3e-73
Identities = 149/284 (52%), Positives = 197/284 (69%), Gaps = 9/284 (3%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFN---SAHEPNVFVFTNML 171
KQ HA LIQNSL HH WVALLI+ C R+ AP Y +I + + P+++ F + L
Sbjct: 28 KQLHAQLIQNSL--HHHYSWVALLINACMRLRAPLSYTRTILHYSTATPSPDIYAFISAL 85
Query: 172 KFHSRRGA--QSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDK 345
+++ + +V +L ++ KP A +YP+LIKS+ KAGI FH+HL+K+G D
Sbjct: 86 EYYYTLPVCKEQEVASLCHQLLASTNKPAA-LYPILIKSSVKAGILFHSHLVKLGHHHDP 144
Query: 346 YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPE- 522
+ N +MD Y K+GPIE AR+LFDE+P + DWNS+ISGYW WG E EA LF+LMPE
Sbjct: 145 HTRNALMDSYAKFGPIEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAEACCLFNLMPEN 204
Query: 523 -KDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSE 699
++V+TWTAMVTG + MKDL ARR+FD MP + VVSWNAM+SGYA+NGF +EA+ LF
Sbjct: 205 KRNVVTWTAMVTGSANMKDLITARRYFDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLH 264
Query: 700 VLSA--GIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
++ A GI P++ TWVAVISSCSS ADP LA SVVK ++ K I+
Sbjct: 265 MIKAGDGIEPNQITWVAVISSCSSLADPCLADSVVKFLDKKKIQ 308
Score = 104 bits (259), Expect = 4e-20
Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 8/242 (3%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLD--VKPDAFVYPLLIKSAGKAG 297
F+ NV + ML +++ G + L LF M K ++P+ + +I S
Sbjct: 231 FDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHMIKAGDGIEPNQITWVAVISSCSSLA 290
Query: 298 IAFHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIIS 462
A + LD+ K Y+ ++D++ K G +ETA+++FDE E
Sbjct: 291 DPCLADSVVKFLDKKKIQLNSYLKTALLDMHAKCGNLETAQKIFDEFGE----------- 339
Query: 463 GYWNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAM 642
+ TW AM++ Y + +L AR FD+MP + VVSWN+M
Sbjct: 340 -------------------HRSCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSM 380
Query: 643 ISGYAQNGFTEEAVTLFSEVL-SAGIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKG 819
I+G+AQNG A+ LF E++ + ++PDE T V+VIS C ++ VV I +
Sbjct: 381 IAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQ 440
Query: 820 IR 825
I+
Sbjct: 441 IK 442
Score = 58.9 bits (141), Expect = 2e-06
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 12/209 (5%)
Frame = +1
Query: 112 AVSIFNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRM-QKLDVKPDAFVYPLLIKSAG 288
A +F+ NV + +M+ ++ G + + LF M ++KPD +I G
Sbjct: 362 ARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTMVSVISVCG 421
Query: 289 KAGIAFHAHLL-------KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADW 447
+ G + + ++ L Y N ++ +Y K G ++ A +F E+ ++ +
Sbjct: 422 QLGALEMGNWVVNFIVENQIKLSISGY--NTLIFMYSKCGSMKDAERIFQEMKRRDTISY 479
Query: 448 NSIISGYWNWGNEVEAKKLFDLMP----EKDVITWTAMVTGYSKMKDLERARRFFDEMPE 615
N+++SG+ G +EA +L M E D IT+ ++T S + L+ RR F+ +
Sbjct: 480 NALVSGFGAHGRGIEAVELMSRMRKEGIEPDHITYIGVLTACSHARLLKEGRRVFESIKF 539
Query: 616 KTVVSWNAMISGYAQNGFTEEAVTLFSEV 702
V + M+ + G +EA L +
Sbjct: 540 PAVDHYACMVDLLGRVGELDEAKRLIDHM 568
>gb|EOY26401.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao]
Length = 833
Score = 281 bits (718), Expect = 3e-73
Identities = 149/284 (52%), Positives = 197/284 (69%), Gaps = 9/284 (3%)
Frame = +1
Query: 1 KQFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFN---SAHEPNVFVFTNML 171
KQ HA LIQNSL HH WVALLI+ C R+ AP Y +I + + P+++ F + L
Sbjct: 28 KQLHAQLIQNSL--HHHYSWVALLINACMRLRAPLSYTRTILHYSTATPSPDIYAFISAL 85
Query: 172 KFHSRRGA--QSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDK 345
+++ + +V +L ++ KP A +YP+LIKS+ KAGI FH+HL+K+G D
Sbjct: 86 EYYYTLPVCKEQEVASLCHQLLASTNKPAA-LYPILIKSSVKAGILFHSHLVKLGHHHDP 144
Query: 346 YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPE- 522
+ N +MD Y K+GPIE AR+LFDE+P + DWNS+ISGYW WG E EA LF+LMPE
Sbjct: 145 HTRNALMDSYAKFGPIEAARKLFDEMPGRMAEDWNSMISGYWKWGKEAEACCLFNLMPEN 204
Query: 523 -KDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSE 699
++V+TWTAMVTG + MKDL ARR+FD MP + VVSWNAM+SGYA+NGF +EA+ LF
Sbjct: 205 KRNVVTWTAMVTGSANMKDLITARRYFDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLH 264
Query: 700 VLSA--GIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
++ A GI P++ TWVAVISSCSS ADP LA SVVK ++ K I+
Sbjct: 265 MIKAGDGIEPNQITWVAVISSCSSLADPCLADSVVKFLDKKKIQ 308
Score = 104 bits (259), Expect = 4e-20
Identities = 70/242 (28%), Positives = 113/242 (46%), Gaps = 8/242 (3%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLD--VKPDAFVYPLLIKSAGKAG 297
F+ NV + ML +++ G + L LF M K ++P+ + +I S
Sbjct: 231 FDRMPRRNVVSWNAMLSGYAKNGFAKEALHLFLHMIKAGDGIEPNQITWVAVISSCSSLA 290
Query: 298 IAFHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIIS 462
A + LD+ K Y+ ++D++ K G +ETA+++FDE E
Sbjct: 291 DPCLADSVVKFLDKKKIQLNSYLKTALLDMHAKCGNLETAQKIFDEFGE----------- 339
Query: 463 GYWNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAM 642
+ TW AM++ Y + +L AR FD+MP + VVSWN+M
Sbjct: 340 -------------------HRSCTTWNAMISAYMRFGNLALARELFDKMPVRNVVSWNSM 380
Query: 643 ISGYAQNGFTEEAVTLFSEVL-SAGIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKG 819
I+G+AQNG A+ LF E++ + ++PDE T V+VIS C ++ VV I +
Sbjct: 381 IAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTMVSVISVCGQLGALEMGNWVVNFIVENQ 440
Query: 820 IR 825
I+
Sbjct: 441 IK 442
Score = 58.9 bits (141), Expect = 2e-06
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 12/209 (5%)
Frame = +1
Query: 112 AVSIFNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRM-QKLDVKPDAFVYPLLIKSAG 288
A +F+ NV + +M+ ++ G + + LF M ++KPD +I G
Sbjct: 362 ARELFDKMPVRNVVSWNSMIAGFAQNGQPAMAIQLFKEMIATTNLKPDEVTMVSVISVCG 421
Query: 289 KAGIAFHAHLL-------KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADW 447
+ G + + ++ L Y N ++ +Y K G ++ A +F E+ ++ +
Sbjct: 422 QLGALEMGNWVVNFIVENQIKLSISGY--NTLIFMYSKCGSMKDAERIFQEMKRRDTISY 479
Query: 448 NSIISGYWNWGNEVEAKKLFDLMP----EKDVITWTAMVTGYSKMKDLERARRFFDEMPE 615
N+++SG+ G +EA +L M E D IT+ ++T S + L+ RR F+ +
Sbjct: 480 NALVSGFGAHGRGIEAVELMSRMRKEGIEPDHITYIGVLTACSHARLLKEGRRVFESIKF 539
Query: 616 KTVVSWNAMISGYAQNGFTEEAVTLFSEV 702
V + M+ + G +EA L +
Sbjct: 540 PAVDHYACMVDLLGRVGELDEAKRLIDHM 568
>ref|XP_006417007.1| hypothetical protein EUTSA_v10009648mg [Eutrema salsugineum]
gi|557094778|gb|ESQ35360.1| hypothetical protein
EUTSA_v10009648mg [Eutrema salsugineum]
Length = 490
Score = 275 bits (704), Expect = 1e-71
Identities = 133/276 (48%), Positives = 190/276 (68%), Gaps = 2/276 (0%)
Frame = +1
Query: 4 QFHAHLIQNSLSLHHQNYWVALLIHLCTRVHAPPPYAVSIFNSAHEPNVFVFTNMLKFHS 183
Q A LI + SLH Q+YW + LI CTR+ APP YA +F S PNVFV +M ++ S
Sbjct: 24 QIQAQLIVFN-SLHRQSYWASRLISSCTRLRAPPYYARLVFGSVAFPNVFVVNSMFRYFS 82
Query: 184 RRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNVI 363
+ +D L L+ + + + PDAF +P++IKSAGK G+ FHA + K+G D Y
Sbjct: 83 QMDMANDALRLYKQRSRCGIMPDAFSFPVVIKSAGKFGVLFHALVEKLGYFGDPY----- 137
Query: 364 MDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEK--DVIT 537
+E+AR++FD+I + +DWN +ISGYW WG + EA FD+MPE D ++
Sbjct: 138 --------SVESARKVFDQITRRMCSDWNVMISGYWKWGKKEEACNFFDIMPENKTDAVS 189
Query: 538 WTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGI 717
WT M+TG++K+KDL+ AR +FD+M EK+VV+WNAM+SGYAQNGFTEE + LF++++ G+
Sbjct: 190 WTVMITGFAKLKDLKSARWYFDQMQEKSVVTWNAMLSGYAQNGFTEETLRLFNDMMRLGV 249
Query: 718 RPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
+P+ETTWV VIS+CSSR DP LA S+VK+I+++ +R
Sbjct: 250 KPNETTWVIVISACSSRGDPSLAHSLVKLIDEQRVR 285
Score = 119 bits (298), Expect = 1e-24
Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 6/240 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E +V + ML +++ G + L LF+ M +L VKP+ + ++I + G
Sbjct: 210 FDQMQEKSVVTWNAMLSGYAQNGFTEETLRLFNDMMRLGVKPNETTWVIVISACSSRGDP 269
Query: 304 FHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
AH L +D + ++ ++D++ K I +AR +F+E
Sbjct: 270 SLAHSLVKLIDEQRVRLNCFLKTALLDMHAKCRDIVSARRIFNE---------------- 313
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
L +++++TW AM++GY+++ DL AR+ FD MPEK VVSWN+MI+
Sbjct: 314 --------------LGTQRNLVTWNAMISGYTRIGDLSLARQLFDTMPEKNVVSWNSMIA 359
Query: 649 GYAQNGFTEEAVTLFSEVLSAG-IRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
G+A NG A+ F E++ +G +PDE T + +S+C D +L +V I I+
Sbjct: 360 GFAHNGQPALAIEFFKEMIDSGDSKPDEVTMIGALSACGRMDDLELGDWIVNYIAKNQIK 419
>gb|EMJ26368.1| hypothetical protein PRUPE_ppa002283mg [Prunus persica]
Length = 692
Score = 273 bits (699), Expect = 4e-71
Identities = 128/221 (57%), Positives = 172/221 (77%), Gaps = 2/221 (0%)
Frame = +1
Query: 166 MLKFHSRRGAQ--SDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDR 339
MLK++S G+ + V++L+ ++Q D++ FVYP+LIKSAG GI FHAH+LK+GL
Sbjct: 1 MLKYYSNLGSAHFNQVVSLYQKLQCCDLRIGTFVYPVLIKSAGSKGIEFHAHVLKLGLAS 60
Query: 340 DKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMP 519
D YI N IM LY KYGP+E AR++F E+ E+ +ADWN++I GYWNWGN+ EA +LFD+MP
Sbjct: 61 DPYIRNAIMGLYAKYGPVENARDVFAEMHERTLADWNNMIFGYWNWGNKAEACRLFDMMP 120
Query: 520 EKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSE 699
E++V+TWTAMVTGY++MKDLE ARR+FDE+PEK VVSWNAM+S YAQN F EEA+ LF +
Sbjct: 121 ERNVVTWTAMVTGYARMKDLENARRYFDEIPEKNVVSWNAMLSAYAQNRFPEEALKLFDD 180
Query: 700 VLSAGIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGI 822
++++ +P+ETTW VIS+CSS D LA S V+ +N K I
Sbjct: 181 MMNSRDQPNETTWAIVISACSSCGDCSLADSFVQKLNQKRI 221
Score = 110 bits (275), Expect = 6e-22
Identities = 68/241 (28%), Positives = 117/241 (48%), Gaps = 7/241 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ E NV + ML +++ + L LFD M +P+ + ++I + G
Sbjct: 147 FDEIPEKNVVSWNAMLSAYAQNRFPEEALKLFDDMMNSRDQPNETTWAIVISACSSCGDC 206
Query: 304 FHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
A L++ + + ++D+Y K G ++ AR++FDE
Sbjct: 207 SLADSFVQKLNQKRIHLSYFAKTALLDMYAKRGSLQAARQVFDE---------------- 250
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
L ++ +TW AM++ Y+++ DL AR FD+M E+ VV+WN+MIS
Sbjct: 251 --------------LGVSRNTVTWNAMISAYTRVGDLASARELFDKMLERDVVTWNSMIS 296
Query: 649 GYAQNGFTEEAVTLFSEVLSAG--IRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGI 822
GYAQNG + A+ LF ++++A +PDE T V+VIS+C D+ V+ ++ I
Sbjct: 297 GYAQNGQSALAIDLFKDMITAADDPKPDEVTMVSVISACGHLGALDIGNWVISIVRKNHI 356
Query: 823 R 825
+
Sbjct: 357 K 357
Score = 93.2 bits (230), Expect = 1e-16
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 47/267 (17%)
Frame = +1
Query: 103 PPYAVSIF----NSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPL 270
P A+ +F NS +PN + ++ S G S + ++ + + F
Sbjct: 171 PEEALKLFDDMMNSRDQPNETTWAIVISACSSCGDCSLADSFVQKLNQKRIHLSYFAKTA 230
Query: 271 LIKSAGKAGIAFHAHLL--KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVAD 444
L+ K G A + ++G+ R+ N ++ Y + G + +ARELFD++ E++V
Sbjct: 231 LLDMYAKRGSLQAARQVFDELGVSRNTVTWNAMISAYTRVGDLASARELFDKMLERDVVT 290
Query: 445 WNSIISGYWNWGNEVEAKKLFDLM------PEKDVITWTAMVTG---------------- 558
WNS+ISGY G A LF M P+ D +T ++++
Sbjct: 291 WNSMISGYAQNGQSALAIDLFKDMITAADDPKPDEVTMVSVISACGHLGALDIGNWVISI 350
Query: 559 -------------------YSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEA 681
YSK ++ A+R F EM + VVS+N +I+G+A +G EA
Sbjct: 351 VRKNHIKLSISGYNSLIFLYSKCGSMDDAKRTFQEMTTRDVVSYNTLIAGFAAHGHGMEA 410
Query: 682 VTLFSEVLSAGIRPDETTWVAVISSCS 762
V L S++ + PD T++ ++++CS
Sbjct: 411 VKLLSKMKGEFVEPDRVTYIVILTACS 437
>gb|AAF43948.1|AC012188_25 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC004044.1 and contains two domains PF|01535
of unknown function [Arabidopsis thaliana]
Length = 455
Score = 270 bits (691), Expect = 4e-70
Identities = 120/209 (57%), Positives = 170/209 (81%)
Frame = +1
Query: 199 SDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDKYICNVIMDLYG 378
+DVL L+++ + + PDAF +P++IKSAG+ GI F A + K+G +D Y+ NVIMD+Y
Sbjct: 3 NDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYV 62
Query: 379 KYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEKDVITWTAMVTG 558
K+ +E+AR++FD+I ++ +DWN +ISGYW WGN+ EA KLFD+MPE DV++WT M+TG
Sbjct: 63 KHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITG 122
Query: 559 YSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIRPDETTW 738
++K+KDLE AR++FD MPEK+VVSWNAM+SGYAQNGFTE+A+ LF+++L G+RP+ETTW
Sbjct: 123 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 182
Query: 739 VAVISSCSSRADPDLAGSVVKMINDKGIR 825
V VIS+CS RADP L S+VK+I++K +R
Sbjct: 183 VIVISACSFRADPSLTRSLVKLIDEKRVR 211
Score = 113 bits (283), Expect = 7e-23
Identities = 70/248 (28%), Positives = 128/248 (51%), Gaps = 14/248 (5%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAG-KAGI 300
F+ E +V + ML +++ G D L LF+ M +L V+P+ + ++I + +A
Sbjct: 136 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 195
Query: 301 AFHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISG 465
+ L+K+ +D + ++ ++D++ K I++AR +F+E
Sbjct: 196 SLTRSLVKL-IDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNE--------------- 239
Query: 466 YWNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMI 645
L +++++TW AM++GY+++ D+ AR+ FD MP++ VVSWN++I
Sbjct: 240 ---------------LGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLI 284
Query: 646 SGYAQNGFTEEAVTLFSEVLSAG-IRPDETTWVAVISSCSSRADPDLAGSVVKMI----- 807
+GYA NG A+ F +++ G +PDE T ++V+S+C AD +L +V I
Sbjct: 285 AGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQI 344
Query: 808 --NDKGIR 825
ND G R
Sbjct: 345 KLNDSGYR 352
>ref|XP_002519368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223541435|gb|EEF42985.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 524
Score = 265 bits (676), Expect = 2e-68
Identities = 125/220 (56%), Positives = 171/220 (77%)
Frame = +1
Query: 166 MLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHLLKVGLDRDK 345
MLK++S+ G Q ++L+ F R+ +K DA +YPL+IKS+GK GI FHAH+LK+G D
Sbjct: 1 MLKYYSQLGFQDELLSFFKRIY-CRIKLDASLYPLVIKSSGKDGILFHAHILKLGHQSDP 59
Query: 346 YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVEAKKLFDLMPEK 525
YI NVI+D+Y K+ IE AR+LFDE+ E+++ADWNS+I GYW GNE EA LF + PE+
Sbjct: 60 YIRNVILDMYAKHSLIENARKLFDEMTERSLADWNSMICGYWKCGNETEACSLFSMTPER 119
Query: 526 DVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVL 705
+VITWTAMVTG+SK+K+L+ AR++FD+MP K +VSWNA+ISGYAQNGF EEA+ LF+ ++
Sbjct: 120 NVITWTAMVTGFSKIKELDSARKYFDDMPVKNIVSWNAIISGYAQNGFVEEALKLFNHMI 179
Query: 706 SAGIRPDETTWVAVISSCSSRADPDLAGSVVKMINDKGIR 825
G++P+ETTW VISSCSS DP A S VK+++ + I+
Sbjct: 180 RLGVQPNETTWATVISSCSSCGDPCRAESFVKLLDKRKIK 219
Score = 108 bits (270), Expect = 2e-21
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 6/236 (2%)
Frame = +1
Query: 124 FNSAHEPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIA 303
F+ N+ + ++ +++ G + L LF+ M +L V+P+ + +I S G
Sbjct: 144 FDDMPVKNIVSWNAIISGYAQNGFVEEALKLFNHMIRLGVQPNETTWATVISSCSSCGDP 203
Query: 304 FHAHLLKVGLDRDK-----YICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGY 468
A LD+ K ++ ++D+ K G +E AR +F+E
Sbjct: 204 CRAESFVKLLDKRKIKMNYFVKTALLDMNAKCGNLEAARGIFNE---------------- 247
Query: 469 WNWGNEVEAKKLFDLMPEKDVITWTAMVTGYSKMKDLERARRFFDEMPEKTVVSWNAMIS 648
L ++ TW AM++ Y+++ DL AR FD+MPE+ VSWN MIS
Sbjct: 248 --------------LGVSRNSSTWNAMISAYTRVGDLLSARDLFDKMPERDAVSWNTMIS 293
Query: 649 GYAQNGFTEEAVTLFSEVLSA-GIRPDETTWVAVISSCSSRADPDLAGSVVKMIND 813
GYAQNG + A+ LF E++ A +PDE T V++IS+C +L +V I++
Sbjct: 294 GYAQNGQSAMAIELFKEMIDAKDSQPDEVTMVSIISACGHLGALELGTWIVNFISE 349
Score = 96.3 bits (238), Expect = 1e-17
Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 42/250 (16%)
Frame = +1
Query: 139 EPNVFVFTNMLKFHSRRGAQSDVLALFDRMQKLDVKPDAFVYPLLIKSAGKAGIAFHAHL 318
+PN + ++ S G + + K +K + FV L+ K G A
Sbjct: 184 QPNETTWATVISSCSSCGDPCRAESFVKLLDKRKIKMNYFVKTALLDMNAKCGNLEAARG 243
Query: 319 L--KVGLDRDKYICNVIMDLYGKYGPIETARELFDEIPEKNVADWNSIISGYWNWGNEVE 492
+ ++G+ R+ N ++ Y + G + +AR+LFD++PE++ WN++ISGY G
Sbjct: 244 IFNELGVSRNSSTWNAMISAYTRVGDLLSARDLFDKMPERDAVSWNTMISGYAQNGQSAM 303
Query: 493 AKKLF-------DLMPEK----------------DVITW-----------------TAMV 552
A +LF D P++ ++ TW A++
Sbjct: 304 AIELFKEMIDAKDSQPDEVTMVSIISACGHLGALELGTWIVNFISEYRIELTISGYNALI 363
Query: 553 TGYSKMKDLERARRFFDEMPEKTVVSWNAMISGYAQNGFTEEAVTLFSEVLSAGIRPDET 732
YSK +++ A+R F EM + VVS+N++I G+A +G EA+ L + G+ PD
Sbjct: 364 FMYSKCGNMKEAQRIFQEMETRDVVSYNSLIGGFAAHGEGNEAIKLLLSMKEEGVDPDHV 423
Query: 733 TWVAVISSCS 762
T++ V+++CS
Sbjct: 424 TYIGVLTACS 433