BLASTX nr result
ID: Rauwolfia21_contig00036170
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00036170
(930 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 83 5e-47
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 87 3e-37
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 87 3e-37
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 87 3e-37
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana] 87 3e-37
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 86 4e-37
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 84 2e-36
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 58 6e-35
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ... 64 3e-34
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 66 1e-32
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera] 65 9e-32
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]... 56 4e-31
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group] 54 5e-31
ref|XP_006586527.1| PREDICTED: uncharacterized protein LOC102663... 81 2e-30
gb|ABW74585.1| pol polyprotein [Boechera divaricarpa] 58 4e-30
gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Ja... 54 5e-30
gb|ABB47537.2| retrotransposon protein, putative, unclassified [... 54 5e-30
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g... 57 6e-29
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi... 57 6e-29
gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subc... 54 3e-28
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 82.8 bits (203), Expect(4) = 5e-47
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWL 545
+ I+GKGTILIS KDG+HK+I DVY+VPKL NILSLGQ++E YEI MKD LWL
Sbjct: 62 VQIQGKGTILISLKDGAHKLITDVYYVPKLKSNILSLGQLVEKGYEIHMKDCCLWL 117
Score = 73.6 bits (179), Expect(4) = 5e-47
Identities = 36/63 (57%), Positives = 42/63 (66%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
G+P INHPN LCEA LLGKH +RSFPK S A E LQL + DVC + PS KYF+
Sbjct: 182 GMPQINHPNQLCEACLLGKHARRSFPKEANSRAKEPLQLVYTDVCGPINPPSCGNNKYFL 241
Query: 902 LLL 910
L +
Sbjct: 242 LFI 244
Score = 71.6 bits (174), Expect(4) = 5e-47
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
L+AKV +SRNRMF L+I+ E LK + +DE W HMRFG LNF ALK++GE+KMV G
Sbjct: 124 LIAKVFMSRNRMFTLNIKTNEAKCLKASIKDESWCWHMRFGHLNFGALKSLGEEKMVKG 182
Score = 28.9 bits (63), Expect(4) = 5e-47
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 299 GASDHMCRKKEDFIELDEKMKDNVS 373
G C KE F+ELD+K+K NVS
Sbjct: 31 GVEGVTCGCKEKFVELDKKVKGNVS 55
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 87.0 bits (214), Expect(3) = 3e-37
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +2
Query: 104 RYDKSKVECYTCHKMGHYSWECNEANN--VTEKANLVEEK-QXXXXXXXXXXXXDKSDHD 274
RYDKS V+CY C K GHY+ EC +N EKAN VEEK Q D+ + +
Sbjct: 273 RYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEEN 332
Query: 275 SKIWYLDNGASDHMCRKKEDFIELDEKMKDNVSL 376
K WYLD+GAS+HMC +K F ELDE ++ NV+L
Sbjct: 333 HK-WYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Score = 63.5 bits (153), Expect(3) = 3e-37
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSL 539
+ ++GKG ILI K+G H+ I +VY++P + NILSLGQ+LE Y+I +KD +L
Sbjct: 371 MEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Score = 53.1 bits (126), Expect(3) = 3e-37
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
L+ KV +S+NRMF L+I+ LK+ ++E W H+RFG LNF L+ + K+MV G
Sbjct: 433 LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 491
Score = 64.7 bits (156), Expect = 5e-08
Identities = 34/72 (47%), Positives = 41/72 (56%)
Frame = +2
Query: 695 LWEKRRWCWGLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLP 874
L ++ GLP INHPN +CE LLGK K SFPK S A +SL+L H DVC
Sbjct: 482 LLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPK 541
Query: 875 SFVKKKYFVLLL 910
S K YF+L +
Sbjct: 542 SLGKSNYFLLFI 553
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 87.0 bits (214), Expect(3) = 3e-37
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +2
Query: 104 RYDKSKVECYTCHKMGHYSWECNEANN--VTEKANLVEEK-QXXXXXXXXXXXXDKSDHD 274
RYDKS V+CY C K GHY+ EC +N EKAN VEEK Q D+ + +
Sbjct: 273 RYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQEEN 332
Query: 275 SKIWYLDNGASDHMCRKKEDFIELDEKMKDNVSL 376
K WYLD+GAS+HMC +K F ELDE ++ NV+L
Sbjct: 333 HK-WYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Score = 63.5 bits (153), Expect(3) = 3e-37
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSL 539
+ ++GKG ILI K+G H+ I +VY++P + NILSLGQ+LE Y+I +KD +L
Sbjct: 371 MEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Score = 53.1 bits (126), Expect(3) = 3e-37
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
L+ KV +S+NRMF L+I+ LK+ ++E W H+RFG LNF L+ + K+MV G
Sbjct: 433 LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 491
Score = 62.8 bits (151), Expect = 2e-07
Identities = 33/72 (45%), Positives = 40/72 (55%)
Frame = +2
Query: 695 LWEKRRWCWGLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLP 874
L ++ GLP INHPN +CE LLGK K SFPK S A + L+L H DVC
Sbjct: 482 LLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPK 541
Query: 875 SFVKKKYFVLLL 910
S K YF+L +
Sbjct: 542 SLGKSNYFLLFI 553
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1272
Score = 87.0 bits (214), Expect(3) = 3e-37
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +2
Query: 104 RYDKSKVECYTCHKMGHYSWECNEANN--VTEKANLVEEK-QXXXXXXXXXXXXDKSDHD 274
RYDKS V+CY C K GHY+ EC +N EKAN VEEK Q D+ + +
Sbjct: 273 RYDKSSVKCYNCGKFGHYASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEEN 332
Query: 275 SKIWYLDNGASDHMCRKKEDFIELDEKMKDNVSL 376
K WYLD+GAS+HMC +K F ELDE ++ NV+L
Sbjct: 333 HK-WYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Score = 63.5 bits (153), Expect(3) = 3e-37
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSL 539
+ ++GKG ILI K+G H+ I +VY++P + NILSLGQ+LE Y+I +KD +L
Sbjct: 371 MEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Score = 53.1 bits (126), Expect(3) = 3e-37
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
L+ KV +S+NRMF L+I+ LK+ ++E W H+RFG LNF L+ + K+MV G
Sbjct: 433 LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 491
Score = 60.8 bits (146), Expect = 7e-07
Identities = 32/72 (44%), Positives = 39/72 (54%)
Frame = +2
Query: 695 LWEKRRWCWGLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLP 874
L ++ GLP INHPN +CE LLG K SFPK S A + L+L H DVC
Sbjct: 482 LLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPK 541
Query: 875 SFVKKKYFVLLL 910
S K YF+L +
Sbjct: 542 SLGKSNYFLLFI 553
>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
Length = 544
Score = 87.0 bits (214), Expect(3) = 3e-37
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Frame = +2
Query: 104 RYDKSKVECYTCHKMGHYSWECNEANN--VTEKANLVEEK-QXXXXXXXXXXXXDKSDHD 274
RYDKS V+CY C K GHY+ EC +N EKAN VEEK Q D+ + +
Sbjct: 289 RYDKSSVKCYNCGKFGHYASECKAPSNKKFKEKANYVEEKIQEEDMLLMASYKKDEQEEN 348
Query: 275 SKIWYLDNGASDHMCRKKEDFIELDEKMKDNVSL 376
K WYLD+GAS+HMC +K F ELDE ++ NV+L
Sbjct: 349 HK-WYLDSGASNHMCGRKSMFAELDESVRGNVAL 381
Score = 63.5 bits (153), Expect(3) = 3e-37
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSL 539
+ ++GKG ILI K+G H+ I +VY++P + NILSLGQ+LE Y+I +KD +L
Sbjct: 387 MEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 440
Score = 53.1 bits (126), Expect(3) = 3e-37
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
L+ KV +S+NRMF L+I+ LK+ ++E W H+RFG LNF L+ + K+MV G
Sbjct: 449 LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 507
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 86.3 bits (212), Expect(3) = 4e-37
Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +2
Query: 104 RYDKSKVECYTCHKMGHYSWECNEANN--VTEKANLVEEKQXXXXXXXXXXXXDKSDHDS 277
RYDKS V+CY C K GHY+ EC +N EKAN VEEK ++
Sbjct: 273 RYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKANYVEEKIQEEDMLLMASYKKDEQKEN 332
Query: 278 KIWYLDNGASDHMCRKKEDFIELDEKMKDNVSL 376
WYLD+GAS+HMC +K F ELDE ++ NV+L
Sbjct: 333 HKWYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Score = 63.5 bits (153), Expect(3) = 4e-37
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSL 539
+ ++GKG ILI K+G H+ I +VY++P + NILSLGQ+LE Y+I +KD +L
Sbjct: 371 MEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Score = 53.1 bits (126), Expect(3) = 4e-37
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
L+ KV +S+NRMF L+I+ LK+ ++E W H+RFG LNF L+ + K+MV G
Sbjct: 433 LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 491
Score = 62.8 bits (151), Expect = 2e-07
Identities = 33/72 (45%), Positives = 40/72 (55%)
Frame = +2
Query: 695 LWEKRRWCWGLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLP 874
L ++ GLP INHPN +CE LLGK K SFPK S A + L+L H DVC
Sbjct: 482 LLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPK 541
Query: 875 SFVKKKYFVLLL 910
S K YF+L +
Sbjct: 542 SLGKSNYFLLFI 553
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 84.3 bits (207), Expect(3) = 2e-36
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Frame = +2
Query: 104 RYDKSKVECYTCHKMGHYSWECNEANN--VTEKANLVEEKQXXXXXXXXXXXXDKSDHDS 277
RYDKS V+CY C K GHY+ EC +N EKA+ VEEK ++
Sbjct: 273 RYDKSSVKCYNCGKFGHYASECKAPSNKKFEEKAHYVEEKIQEEDMLLMASYKKDEQKEN 332
Query: 278 KIWYLDNGASDHMCRKKEDFIELDEKMKDNVSL 376
WYLD+GAS+HMC +K F ELDE ++ NV+L
Sbjct: 333 HKWYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Score = 63.5 bits (153), Expect(3) = 2e-36
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSL 539
+ ++GKG ILI K+G H+ I +VY++P + NILSLGQ+LE Y+I +KD +L
Sbjct: 371 MEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNL 424
Score = 53.1 bits (126), Expect(3) = 2e-36
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
L+ KV +S+NRMF L+I+ LK+ ++E W H+RFG LNF L+ + K+MV G
Sbjct: 433 LITKVPMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLSRKEMVRG 491
Score = 62.8 bits (151), Expect = 2e-07
Identities = 33/72 (45%), Positives = 40/72 (55%)
Frame = +2
Query: 695 LWEKRRWCWGLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLP 874
L ++ GLP INHPN +CE LLGK K SFPK S A + L+L H DVC
Sbjct: 482 LLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPK 541
Query: 875 SFVKKKYFVLLL 910
S K YF+L +
Sbjct: 542 SLGKSNYFLLFI 553
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 57.8 bits (138), Expect(4) = 6e-35
Identities = 26/56 (46%), Positives = 37/56 (66%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWL 545
+ ++G+GT+ KDG ++DVY+VP L NILS+GQ+ E Y I +KDR L L
Sbjct: 392 VEVKGRGTVCYLQKDGLIGSLQDVYYVPDLKTNILSMGQLTEKGYSIFLKDRFLHL 447
Score = 55.8 bits (133), Expect(4) = 6e-35
Identities = 26/61 (42%), Positives = 42/61 (68%)
Frame = +1
Query: 541 GYLVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVL 720
G LVA++ ++RNRM+KL++++I L+VN +D+ H+RFG L+ LK + +K MV
Sbjct: 452 GCLVARIEMARNRMYKLNLRSIREKCLQVNIEDKASLWHLRFGHLHHGGLKELAKKNMVH 511
Query: 721 G 723
G
Sbjct: 512 G 512
Score = 52.0 bits (123), Expect(4) = 6e-35
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 18/105 (17%)
Frame = +2
Query: 104 RYDKSKVECYTCHKMGHYSWECNEAN------------------NVTEKANLVEEKQXXX 229
R + S +ECY CHK GHY+ +CN + E NL E +
Sbjct: 279 RSNYSNIECYKCHKYGHYAKDCNSDKCYNCGKVGHFAKDCRADIKIEETTNLALEVETNE 338
Query: 230 XXXXXXXXXDKSDHDSKIWYLDNGASDHMCRKKEDFIELDEKMKD 364
++D+ +WYLD+GAS+HMC + F ++ +K++D
Sbjct: 339 GVLLMAQDEVNINNDT-LWYLDSGASNHMCGHEYLFKDM-QKIED 381
Score = 50.1 bits (118), Expect(4) = 6e-35
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +2
Query: 704 KRRWCWGLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFV 883
K+ GLP +++ CE +L KH + SFPK A + L+L H D+C SF
Sbjct: 506 KKNMVHGLPNMDYEGKFCEECVLSKHVRTSFPKKAQYWAKQPLELIHTDICGPITPESFS 565
Query: 884 KKKYFVLLL 910
K+YF+ +
Sbjct: 566 GKRYFITFI 574
>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
Length = 1239
Score = 63.5 bits (153), Expect(4) = 3e-34
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Frame = +2
Query: 86 SNSSERRYDK---SKVECYTCHKMGHYSWECNEANN----------VTEKANLVEEKQXX 226
SN ER +K S++EC+ CHK GH++ C E N+ V E A + E
Sbjct: 122 SNGGERNKEKKDYSQIECFHCHKKGHFASVCPEKNDDHQLNKAETEVAEAALYMHEVVFL 181
Query: 227 XXXXXXXXXXDKSDHDSKIWYLDNGASDHMCRKKEDFIELDEKMKDNV 370
+++ D WYLDNGAS+HM K F EL+E +K V
Sbjct: 182 NEESVMPKKLEQNKTDDGNWYLDNGASNHMTGDKSFFSELNESIKGRV 229
Score = 55.8 bits (133), Expect(4) = 3e-34
Identities = 24/56 (42%), Positives = 37/56 (66%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWL 545
+ I GKG+I+ +K G K++ ++Y++P+L NILSLGQ E ++ MKD L L
Sbjct: 237 VKINGKGSIIFEAKTGEQKLLTNIYYIPELRSNILSLGQATEQGCDVRMKDNYLTL 292
Score = 48.1 bits (113), Expect(4) = 3e-34
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
GLP IN LCE+ L+GK T+ SFP A + + L+L H D+C + + +Y
Sbjct: 357 GLPEINEEKKLCESCLVGKQTRNSFPSATPHRSSQVLELLHADLCGPISPSTLAQNRYIF 416
Query: 902 LLL 910
+++
Sbjct: 417 VII 419
Score = 45.8 bits (107), Expect(4) = 3e-34
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +1
Query: 541 GYLVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVL 720
G L+ KV S NR++K+ ++ + S L +E W+ H R G +NF +K M + +MV
Sbjct: 297 GRLLVKVLRSPNRLYKVSLKVGKPSCLLTKINEEPWRWHARLGHINFKTIKDMAKLEMVR 356
Query: 721 G 723
G
Sbjct: 357 G 357
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 65.9 bits (159), Expect(4) = 1e-32
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = +2
Query: 110 DKSKVECYTCHKMGHYSWEC--NEANNVTEKANLVEEKQXXXXXXXXXXXXDKSDHDSKI 283
DKS VECY CH+ GHY EC N E+ N E+++ ++ H + +
Sbjct: 236 DKSNVECYRCHRYGHYKXECRTNMNKQGEERTNFAEKEE--EVSLLMACHANQXTHPN-L 292
Query: 284 WYLDNGASDHMCRKKEDFIELDEKMKDNVS 373
WY+D G S+HMC K F +LDE + +V+
Sbjct: 293 WYIDTGCSNHMCGDKSAFSDLDETFRXSVT 322
Score = 52.8 bits (125), Expect(4) = 1e-32
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKD 530
+S+ GKG++ I SK+ S ++I +V+ VP L N+LS+ Q+ E YEI +KD
Sbjct: 329 VSVMGKGSVXIHSKEKSDQIISNVFFVPDLKTNLLSVXQLQEKGYEIFIKD 379
Score = 47.8 bits (112), Expect(4) = 1e-32
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
L+A+V ++ NRMF L + + DE W H R+G LNF LK + +K MV G
Sbjct: 391 LIAQVNMTTNRMFPLYLDNTTQNCFSTKLMDEGWLWHFRYGHLNFGGLKTLQQKNMVTG 449
Score = 41.6 bits (96), Expect(4) = 1e-32
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +2
Query: 701 EKRRWCWGLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSF 880
+++ GLP I P+ +CE ++GK + FPK + L+L H D+C + S
Sbjct: 442 QQKNMVTGLPPIXTPSQICEECVVGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSN 501
Query: 881 VKKKYFVLLL 910
K+YF+ +
Sbjct: 502 GGKRYFITFI 511
>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
Length = 1246
Score = 64.7 bits (156), Expect(4) = 9e-32
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +2
Query: 80 HYSNS-SERRYDKSKVECYTCHKMGHYSWEC--NEANNVTEKANLVEEKQXXXXXXXXXX 250
+YS + R DKS VECY CH+ GHY EC N E+ N E+++
Sbjct: 225 NYSTTYKSRSTDKSNVECYRCHRYGHYKSECRTNMNKQGEERTNFAEKEE--EVSLLMAC 282
Query: 251 XXDKSDHDSKIWYLDNGASDHMCRKKEDFIELDEKMKDNVS 373
++ H + +WY+D S+HMC K F +LDE +++V+
Sbjct: 283 HANQGTHXN-LWYIDTXCSNHMCGDKSAFSDLDETFRNSVT 322
Score = 54.3 bits (129), Expect(4) = 9e-32
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKD 530
+S+ GKG++ I SK+ S K+I +V+ VP L +LS+GQ+ E YEI +KD
Sbjct: 329 VSVMGKGSVRIHSKEKSDKIISNVFFVPDLKTTLLSVGQLQEKGYEIFIKD 379
Score = 47.4 bits (111), Expect(4) = 9e-32
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
L+A+V ++ NRMF L + + V DE W H R+G LNF LK + K MV G
Sbjct: 391 LIAQVNMTTNRMFPLYLDNTTQNCFSVKLMDEGWLWHFRYGHLNFXXLKTLQXKNMVTG 449
Score = 38.5 bits (88), Expect(4) = 9e-32
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
GLP I + +CE + GK + FPK + L+L H D+C + S K+YF+
Sbjct: 449 GLPXIQTXSQICEECVXGKQHRYQFPKGKSWRXNKVLELVHSDICGPINPTSNGGKRYFI 508
Query: 902 LLL 910
+
Sbjct: 509 TFI 511
>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108710383|gb|ABF98178.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1339
Score = 55.8 bits (133), Expect(4) = 4e-31
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWLF 548
+ I GKG+IL S K+G ++ DVY++P L CN++SLGQ+ E + ++M L +F
Sbjct: 350 VQIMGKGSILFSCKNGDQWLLDDVYYIPSLYCNMVSLGQLTETGHRVVMDGDDLEVF 406
Score = 52.0 bits (123), Expect(4) = 4e-31
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
G+P ++HPN LC+A L+ K ++ FP +A L+L H+D+C +F +YF+
Sbjct: 471 GVPAVHHPNQLCQACLVAKQVRQPFPGMANYLAEAPLELLHMDLCGPITPSTFTGNRYFM 530
Query: 902 LLL 910
L++
Sbjct: 531 LIV 533
Score = 47.8 bits (112), Expect(4) = 4e-31
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 27/114 (23%)
Frame = +2
Query: 110 DKSKVECYTCHKMGHYSWECNEANNVTEKANLVEEKQ----------------------- 220
DKS ++C+ C + GHYS +C +A+L + +
Sbjct: 229 DKSHIKCFNCEEFGHYSTQCPHPKKKKAEAHLAQTEDAGPTLLLAVTEAVQNASRQDALC 288
Query: 221 ----XXXXXXXXXXXXDKSDHDSKIWYLDNGASDHMCRKKEDFIELDEKMKDNV 370
+K +WYLDNGAS+HM F ELDE + V
Sbjct: 289 GLVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDHRKFRELDETVTGQV 342
Score = 47.0 bits (110), Expect(4) = 4e-31
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLGA 726
LV KV S NR++++++Q L + D W H R G +NF+ALK + +K+M G
Sbjct: 413 LVMKVRRSSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMAAGV 472
Query: 727 -ALH 735
A+H
Sbjct: 473 PAVH 476
>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
Length = 893
Score = 53.9 bits (128), Expect(4) = 5e-31
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWLF 548
+ I G+G+IL S K+G ++ DVY++P L CN++SLGQ+ E + ++M L +F
Sbjct: 210 VQIMGQGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDGDDLEVF 266
Score = 52.0 bits (123), Expect(4) = 5e-31
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
G+P ++HPN LC+A L+ K ++SFP A L+L H+D+C +F +YF+
Sbjct: 331 GVPAVHHPNQLCQACLVAKQVRQSFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFM 390
Query: 902 LLL 910
L++
Sbjct: 391 LIV 393
Score = 48.9 bits (115), Expect(4) = 5e-31
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 27/114 (23%)
Frame = +2
Query: 110 DKSKVECYTCHKMGHYSWECNEANNVTEKANLVEEKQ----------------------- 220
DKS ++C+ C + GHYS +C +A+L + +
Sbjct: 89 DKSHIKCFNCEEFGHYSTQCPHPKKKKAEAHLAQTEDAGPALLLAVTEAVQNAPCQDALC 148
Query: 221 ----XXXXXXXXXXXXDKSDHDSKIWYLDNGASDHMCRKKEDFIELDEKMKDNV 370
+K +WYLDNGAS+HM + F ELDE + V
Sbjct: 149 GLVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETVTGQV 202
Score = 47.4 bits (111), Expect(4) = 5e-31
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLGA 726
LV KV + NR++++++Q L + D W H R G +NF+ALK + +K+MV G
Sbjct: 273 LVMKVRRTSNRLYRIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMVAGV 332
Query: 727 -ALH 735
A+H
Sbjct: 333 PAVH 336
>ref|XP_006586527.1| PREDICTED: uncharacterized protein LOC102663942 [Glycine max]
Length = 352
Score = 80.9 bits (198), Expect(3) = 2e-30
Identities = 39/94 (41%), Positives = 55/94 (58%)
Frame = +2
Query: 92 SSERRYDKSKVECYTCHKMGHYSWECNEANNVTEKANLVEEKQXXXXXXXXXXXXDKSDH 271
+S RYDKS+++C+ C+K+GHY+ EC + V EKAN VEEK +K +
Sbjct: 157 NSWSRYDKSQIKCFNCNKIGHYASECRFSKKVEEKANFVEEK-GGEEETLLLACQNKFEE 215
Query: 272 DSKIWYLDNGASDHMCRKKEDFIELDEKMKDNVS 373
WYLD G S+HMC K F+E++E +VS
Sbjct: 216 KRNKWYLDTGTSNHMCGDKSMFVEINEAATGDVS 249
Score = 68.6 bits (166), Expect(3) = 2e-30
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWLFGC* 557
I ++GKG ILI K+GSH+ I +VY+VP + NILSLGQ+LE Y+I +K+ SL+L C
Sbjct: 256 IPVKGKGKILIRLKNGSHQFISNVYYVPNMKNNILSLGQLLEKGYDIHLKEHSLFLRDCR 315
Query: 558 GGYIEK 575
I K
Sbjct: 316 HNLIAK 321
Score = 31.2 bits (69), Expect(3) = 2e-30
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVW 648
L+AKV +S+NRMF L+IQ LK D W
Sbjct: 318 LIAKVPMSKNRMFLLNIQNDVAKCLKACYTDSSW 351
>gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]
Length = 551
Score = 58.2 bits (139), Expect(4) = 4e-30
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Frame = +2
Query: 89 NSSERRYDKSKVECYTCHKMGHYSWECNEANNVTEKANLVEEKQ-----------XXXXX 235
N ++ + D+SK+ C+ C K GH++ C E ++ N VE ++
Sbjct: 256 NQNKEKKDRSKLICFRCEKAGHFASSCPEKPQKNQEVNKVETQEADAALYLHEIVFLNEE 315
Query: 236 XXXXXXXDKSDHDSKIWYLDNGASDHMCRKKEDFIELDEKMKDNV 370
+ + + WYLDNGAS+HM + F EL+E +K V
Sbjct: 316 KIIPKAYETKNEEEGTWYLDNGASNHMTGVRSYFAELNENIKGKV 360
Score = 48.5 bits (114), Expect(4) = 4e-30
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +2
Query: 704 KRRWCWGLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFV 883
K+ +GLP I +CE L+GK T+++FPK + A L+L + D+C PS
Sbjct: 482 KQEMVYGLPEIEEEKQVCEPCLVGKQTRQAFPKTTLYRASRVLELLYADLCGPISPPSLA 541
Query: 884 KKKY 895
+ +Y
Sbjct: 542 QNRY 545
Score = 47.4 bits (111), Expect(4) = 4e-30
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWL 545
+ I GKG+IL K G +++ D+Y++P L NILSLGQ E ++ ++ L L
Sbjct: 368 VDIGGKGSILFQGKTGEQQLVIDIYYIPDLKSNILSLGQATEFGCDVRIRHDYLTL 423
Score = 45.1 bits (105), Expect(4) = 4e-30
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +1
Query: 541 GYLVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVL 720
G L+ KV S NR++K++++ + L + + W+ H R G +NF +K M +++MV
Sbjct: 428 GRLLVKVIRSPNRLYKINLKIGKPICLHTKIEGDTWRWHARLGHINFKTIKDMSKQEMVY 487
Query: 721 G 723
G
Sbjct: 488 G 488
>gb|AAK50412.1|AC021891_13 Putative retroelement [Oryza sativa Japonica Group]
Length = 1217
Score = 53.5 bits (127), Expect(4) = 5e-30
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWLF 548
+ I G G+IL S K+G ++ DVY++P L CN++SLGQ+ E + ++M L +F
Sbjct: 388 VQIMGMGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVMMDGDDLKVF 444
Score = 52.0 bits (123), Expect(4) = 5e-30
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 27/114 (23%)
Frame = +2
Query: 110 DKSKVECYTCHKMGHYSWECNEANNVTEKANLVEEKQ----------------------- 220
DKS ++C+ C + GHYS +C +A+LV+ +
Sbjct: 267 DKSHIKCFNCEEFGHYSTQCPHPKKKKAEAHLVQTEDAGPALLLAVTEAVQNAPRQDAHC 326
Query: 221 ----XXXXXXXXXXXXDKSDHDSKIWYLDNGASDHMCRKKEDFIELDEKMKDNV 370
+K +WYLDNGAS+HM + F ELDE M V
Sbjct: 327 GLVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETMTGQV 380
Score = 50.1 bits (118), Expect(4) = 5e-30
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
G+P ++HPN LC+A L+ K ++ FP A L+L H+D+C +F +YF+
Sbjct: 509 GVPTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFM 568
Query: 902 LLL 910
L++
Sbjct: 569 LIV 571
Score = 43.1 bits (100), Expect(4) = 5e-30
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
LV KV + NR++++++Q L + + W H R G +NF+ALK + +K+M G
Sbjct: 451 LVMKVRRTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDKEMASG 509
>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1172
Score = 53.5 bits (127), Expect(4) = 5e-30
Identities = 23/57 (40%), Positives = 37/57 (64%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWLF 548
+ I G G+IL S K+G ++ DVY++P L CN++SLGQ+ E + ++M L +F
Sbjct: 244 VQIMGMGSILFSCKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVMMDGDDLKVF 300
Score = 52.0 bits (123), Expect(4) = 5e-30
Identities = 31/114 (27%), Positives = 44/114 (38%), Gaps = 27/114 (23%)
Frame = +2
Query: 110 DKSKVECYTCHKMGHYSWECNEANNVTEKANLVEEKQ----------------------- 220
DKS ++C+ C + GHYS +C +A+LV+ +
Sbjct: 123 DKSHIKCFNCEEFGHYSTQCPHPKKKKAEAHLVQTEDAGPALLLAVTEAVQNAPRQDAHC 182
Query: 221 ----XXXXXXXXXXXXDKSDHDSKIWYLDNGASDHMCRKKEDFIELDEKMKDNV 370
+K +WYLDNGAS+HM + F ELDE M V
Sbjct: 183 GLVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMSGDRRKFRELDETMTGQV 236
Score = 50.1 bits (118), Expect(4) = 5e-30
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
G+P ++HPN LC+A L+ K ++ FP A L+L H+D+C +F +YF+
Sbjct: 365 GVPTVHHPNQLCQACLVAKQVRQPFPGMANYRAEAPLELLHMDLCGPITPSTFAGNRYFM 424
Query: 902 LLL 910
L++
Sbjct: 425 LIV 427
Score = 43.1 bits (100), Expect(4) = 5e-30
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
LV KV + NR++++++Q L + + W H R G +NF+ALK + +K+M G
Sbjct: 307 LVMKVRRTSNRLYRIELQLASQVCLLASLDNPAWLWHARIGHVNFHALKLLVDKEMASG 365
>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1427
Score = 56.6 bits (135), Expect(4) = 6e-29
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWLF 548
+ I+GKG+IL S K+G +++DV+++P L CN++SLGQ+ E + ++M + L +F
Sbjct: 397 VKIQGKGSILFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVF 453
Score = 52.0 bits (123), Expect(4) = 6e-29
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
G+P I HPN LC+A L+ K ++ FP A E L+L HID+C + +YF+
Sbjct: 518 GIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFM 577
Query: 902 LLL 910
L++
Sbjct: 578 LIV 580
Score = 48.9 bits (115), Expect(4) = 6e-29
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 20/107 (18%)
Frame = +2
Query: 110 DKSKVECYTCHKMGHYSWECNEANNVTEKANLVEEKQXXXXXXXXXXXXDKSD----HDS 277
DKS ++CY C + GHYS +C +A+L + + + H+
Sbjct: 283 DKSHIKCYNCEEFGHYSTQCPHPKKKKVEAHLAQTDDANPALLLAVTEDEPASGLVVHEE 342
Query: 278 K----------------IWYLDNGASDHMCRKKEDFIELDEKMKDNV 370
+ IW+LDNGAS+HM + F +LD + +V
Sbjct: 343 RVWPQLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSV 389
Score = 37.7 bits (86), Expect(4) = 6e-29
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
LV +V + NR+++++++ L + W H R G +NF A+K + +K M G
Sbjct: 460 LVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGG 518
>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
Length = 1427
Score = 56.6 bits (135), Expect(4) = 6e-29
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWLF 548
+ I+GKG+IL S K+G +++DV+++P L CN++SLGQ+ E + ++M + L +F
Sbjct: 397 VKIQGKGSILFSCKNGDQWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVF 453
Score = 52.0 bits (123), Expect(4) = 6e-29
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
G+P I HPN LC+A L+ K ++ FP A E L+L HID+C + +YF+
Sbjct: 518 GIPAITHPNQLCQACLVAKQIRQPFPATANFRAEEPLELLHIDLCGPITPTTMAGNRYFM 577
Query: 902 LLL 910
L++
Sbjct: 578 LIV 580
Score = 48.9 bits (115), Expect(4) = 6e-29
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 20/107 (18%)
Frame = +2
Query: 110 DKSKVECYTCHKMGHYSWECNEANNVTEKANLVEEKQXXXXXXXXXXXXDKSD----HDS 277
DKS ++CY C + GHYS +C +A+L + + + H+
Sbjct: 283 DKSHIKCYNCEEFGHYSTQCPHPKKKKVEAHLAQTDDANPALLLAVTEDEPASGLVVHEE 342
Query: 278 K----------------IWYLDNGASDHMCRKKEDFIELDEKMKDNV 370
+ IW+LDNGAS+HM + F +LD + +V
Sbjct: 343 RVWPQLLLADSGAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSV 389
Score = 37.7 bits (86), Expect(4) = 6e-29
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
LV +V + NR+++++++ L + W H R G +NF A+K + +K M G
Sbjct: 460 LVMRVRRTPNRLYRIELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGG 518
>gb|ABF96448.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1303
Score = 54.3 bits (129), Expect(4) = 3e-28
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = +3
Query: 378 ISIEGKGTILISSKDGSHKVIKDVYHVPKLNCNILSLGQILENNYEILMKDRSLWLF 548
+ I GKG IL + K+G ++ DVY++P L CN++SLGQ+ E + ++M + L +F
Sbjct: 390 VQIMGKGLILFACKNGDQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDNDDLEVF 446
Score = 50.8 bits (120), Expect(4) = 3e-28
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 722 GLPYINHPNHLCEAFLLGKHTKRSFPKAIISIAIESLQLAHIDVCRLFDLPSFVKKKYFV 901
G+P ++HPN LC+A L+ K ++ FP A L+L H+D+C +F +YF+
Sbjct: 511 GVPQVHHPNQLCQACLMAKQIRQPFPAMANYRAEAPLELLHMDLCGPITPSTFAVNRYFL 570
Query: 902 LLL 910
L++
Sbjct: 571 LIV 573
Score = 44.7 bits (104), Expect(4) = 3e-28
Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 27/108 (25%)
Frame = +2
Query: 110 DKSKVECYTCHKMGHYSWECNEANNVTEKANLVEEKQXXXXXXXXXXXX----------- 256
DKS ++C+ + GHYS +C +A+LV+
Sbjct: 269 DKSHIKCFNYEEFGHYSTQCPHPKKKKAEAHLVQTDDAGPALLLAVTKAVQNAPGQGMDC 328
Query: 257 ----------------DKSDHDSKIWYLDNGASDHMCRKKEDFIELDE 352
+K +WYLDNGAS+HM + F ELDE
Sbjct: 329 GLVVHEERVWPRLMLAEKGAAAGDLWYLDNGASNHMTGDRRKFRELDE 376
Score = 42.7 bits (99), Expect(4) = 3e-28
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 547 LVAKVAISRNRMFKLDIQAIEVSYLKVNAQDEVWQ*HMRFGRLNFNALKAMGEKKMVLG 723
LV KV + NR++++++Q L + D W H R G +NF LK + +K+M G
Sbjct: 453 LVIKVRRTSNRLYRIELQLASPVCLLTSLGDPAWLWHARLGHVNFQTLKLLVDKEMAAG 511