BLASTX nr result
ID: Rauwolfia21_contig00036059
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00036059
(238 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosifor... 75 1e-11
ref|XP_006366329.1| PREDICTED: putative pentatricopeptide repeat... 74 3e-11
ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat... 71 2e-10
ref|XP_006366332.1| PREDICTED: putative pentatricopeptide repeat... 71 2e-10
ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selag... 71 2e-10
ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat... 70 2e-10
ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat... 70 2e-10
gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosifor... 70 3e-10
ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat... 70 3e-10
ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selag... 70 3e-10
gb|AHG94965.1| mitochondrial PPR protein [Nicotiana tomentosifor... 69 5e-10
ref|XP_004296297.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_004238596.1| PREDICTED: putative pentatricopeptide repeat... 68 1e-09
ref|XP_006382720.1| hypothetical protein POPTR_0005s04760g [Popu... 67 2e-09
ref|XP_004240455.1| PREDICTED: putative pentatricopeptide repeat... 67 2e-09
ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containi... 67 2e-09
ref|XP_006360465.1| PREDICTED: putative pentatricopeptide repeat... 66 4e-09
ref|XP_006387657.1| hypothetical protein POPTR_0716s00200g, part... 66 4e-09
gb|EMJ09769.1| hypothetical protein PRUPE_ppa023651mg, partial [... 66 4e-09
>gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/79 (41%), Positives = 52/79 (65%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R+M GI N+ +N INS CLM+RVD G SV + K G DV+TF TL++G+F
Sbjct: 99 REMQKLGIPINDFILNIVINSYCLMHRVDCGFSVLPIYLKNGIPFDVVTFTTLIRGIFAE 158
Query: 181 DRISEAQEIFKKIISKKLC 237
+++ +A +FK+++ +K+C
Sbjct: 159 NKVKDAVNLFKRLVREKIC 177
>ref|XP_006366329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565401693|ref|XP_006366330.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X2 [Solanum
tuberosum]
Length = 590
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R+M GI + V +N INS CLM+RVD SV + K G +V+TF TLL+G+F
Sbjct: 94 REMQKLGIPIDGVILNIVINSYCLMHRVDCAFSVLPIYLKNGIPFNVVTFNTLLRGIFAE 153
Query: 181 DRISEAQEIFKKIISKKLC 237
+++ +A E+FKK++ +K+C
Sbjct: 154 NKVKDAVELFKKLVREKIC 172
>ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 655
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R+M GI + V + + INS C+M+R D G V + K G DV+TF TL++GLF
Sbjct: 159 REMQKLGIQIDGVILTSVINSYCMMHRADCGFLVLPIYLKNGVSFDVVTFTTLIRGLFAE 218
Query: 181 DRISEAQEIFKKIISKKLC 237
+++ +A E+FKK++ +K+C
Sbjct: 219 NKVKDAVELFKKLVREKIC 237
>ref|XP_006366332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 592
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R+M GI N V +N+ INS LM+R D G SV + K G DV+TF L++G F
Sbjct: 96 REMQKLGIPINGVILNSVINSYSLMHRADCGFSVLPIYLKNGISFDVVTFTALIRGFFAE 155
Query: 181 DRISEAQEIFKKIISKKLC 237
+++ +A E+FKK++ +K+C
Sbjct: 156 NKVKDAVELFKKLVREKIC 174
>ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein
SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = +1
Query: 7 MCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKADR 186
M +G S + VT NT ++ C + ++D L +F KRGFVPDV+T+ L+ G KAD+
Sbjct: 111 MIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADK 170
Query: 187 ISEAQEIFKKIISKKL 234
+ EAQ I ++++S+ L
Sbjct: 171 LDEAQRILQRMVSESL 186
>ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 588
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/79 (39%), Positives = 49/79 (62%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R+M GI NE ++ INS CLMNRV+ S+ + K G +V+ F TL++G F
Sbjct: 89 REMRKLGIPINEFILSNVINSYCLMNRVECAFSILPIYLKNGIPFNVVAFNTLIRGFFAE 148
Query: 181 DRISEAQEIFKKIISKKLC 237
+++ A E+FKK++ +K+C
Sbjct: 149 NKVKNAVELFKKLVREKIC 167
>ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 590
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R M GI ++ +N INS CLM RVD SV + K G + +TF TLLKG+F
Sbjct: 94 RQMLKLGIPISDFILNIMINSYCLMYRVDCAFSVLPIYLKNGIPFNTVTFNTLLKGIFAQ 153
Query: 181 DRISEAQEIFKKIISKKLC 237
+++ +A E+FKK++ K+C
Sbjct: 154 NKVKDAVELFKKLVRDKIC 172
>gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/79 (39%), Positives = 50/79 (63%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R+M GI N+ ++ INS C M+RVD SV + K+G DV+TF TL++G+F
Sbjct: 99 REMQKLGIPINDFILSIVINSYCSMHRVDCAFSVLAIYLKKGIPFDVVTFTTLIRGIFVE 158
Query: 181 DRISEAQEIFKKIISKKLC 237
++ +A +FKK++ +K+C
Sbjct: 159 SKVKDAVNLFKKLVREKIC 177
Score = 55.1 bits (131), Expect = 1e-05
Identities = 22/63 (34%), Positives = 40/63 (63%)
Frame = +1
Query: 37 VTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKADRISEAQEIFKK 216
++ N IN C ++D + +F +RG PD++TF T+L+GLF+ RI +A++ F +
Sbjct: 357 ISYNILINGYCKKKKLDEAMQLFREISRRGSKPDIVTFNTILQGLFEVGRIGDAKKFFAE 416
Query: 217 IIS 225
++S
Sbjct: 417 MLS 419
>ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Solanum lycopersicum]
Length = 590
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R M GI N ++ INS CLM RVD SV + K G + +TF TLL+GLF
Sbjct: 94 RQMLKLGIPINNFILSIMINSYCLMCRVDCAFSVLPIYLKNGIPFNAVTFNTLLRGLFSE 153
Query: 181 DRISEAQEIFKKIISKKLC 237
+++ +A E+FKK++ +K+C
Sbjct: 154 NKVKDAVELFKKLVREKIC 172
>ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum lycopersicum]
Length = 592
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R M GI N ++ INS CLM RVD SV + K G + +TF TLL+GLF
Sbjct: 96 RQMLKLGIPINNFILSIMINSYCLMCRVDCAFSVLPIYLKNGIPFNAVTFNTLLRGLFSE 155
Query: 181 DRISEAQEIFKKIISKKLC 237
+++ +A E+FKK++ +K+C
Sbjct: 156 NKVKDAVELFKKLVREKIC 174
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/73 (35%), Positives = 42/73 (57%)
Frame = +1
Query: 7 MCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKADR 186
M GI N + N IN C+ VD + +F ++G PDV+T+ T+L+GLFK +
Sbjct: 344 MIDKGIKPNIFSYNILINGYCMTKEVDDAMQLFCEISQKGTKPDVVTYNTILQGLFKVGK 403
Query: 187 ISEAQEIFKKIIS 225
I A++ F +++S
Sbjct: 404 IVHARKFFAEMLS 416
>ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein
SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +1
Query: 7 MCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKADR 186
M +G S + VT NT ++ C + +D L +F KRGFVPDV+T+ L+ G KAD+
Sbjct: 36 MIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADK 95
Query: 187 ISEAQEIFKKIISKKL 234
+ EAQ I ++++S+ L
Sbjct: 96 LDEAQRILQRMVSENL 111
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 19 GISRNEVTMNTAINSLCLMNR-VDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKADRISE 195
G S N +T +T I+ LC R V L +FGS K+G+ P+V T+ L+ GL K DR++E
Sbjct: 142 GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNE 201
Query: 196 AQEIFKKIISKKL 234
A E+F ++ L
Sbjct: 202 AFELFSGLVKHGL 214
>gb|AHG94965.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 591
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/78 (41%), Positives = 49/78 (62%)
Frame = +1
Query: 4 DMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKAD 183
+M GI N ++ INS CLM+R D G SV + K G +V+TF TLL+GLF +
Sbjct: 96 EMQKIGIPINGFILSMVINSYCLMHRADCGFSVLPIYLKNGIPFNVVTFNTLLRGLFSEN 155
Query: 184 RISEAQEIFKKIISKKLC 237
++ +A E+FKK++ + +C
Sbjct: 156 KVKDAIELFKKLVRENIC 173
>ref|XP_004296297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63130,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 697
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +1
Query: 7 MCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKADR 186
M SGI+ N T++ IN C +NR+D LSV FFK G PDV TF TL+ G +R
Sbjct: 352 MLLSGIASNSYTLSIVINCYCCLNRLDYALSVLAHFFKLGLQPDVATFNTLIHGFVLQNR 411
Query: 187 ISEAQEIFKKII 222
+++A +F K++
Sbjct: 412 VADAARLFSKMV 423
>ref|XP_004238596.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum lycopersicum]
Length = 612
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/78 (38%), Positives = 50/78 (64%)
Frame = +1
Query: 4 DMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKAD 183
+M GI +E + INS CL+ + G S+ G FFK G +V+TF TL++GLF+ +
Sbjct: 114 EMRKLGIPFDEYILTIVINSFCLLGCAENGFSILGVFFKSGVQFNVVTFSTLMRGLFEQN 173
Query: 184 RISEAQEIFKKIISKKLC 237
+I +A +F+K++ +K+C
Sbjct: 174 KIQDAMWLFRKLVKEKIC 191
>ref|XP_006382720.1| hypothetical protein POPTR_0005s04760g [Populus trichocarpa]
gi|550338087|gb|ERP60517.1| hypothetical protein
POPTR_0005s04760g [Populus trichocarpa]
Length = 701
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = +1
Query: 19 GISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKADRISEA 198
G++ N+ T+N INSLC +N +SV FK G PDVITF TL+ GL ++I +A
Sbjct: 40 GVAHNDYTLNILINSLCRLNHAHFAVSVLSKMFKLGIQPDVITFNTLINGLCNEEKIKDA 99
Query: 199 QEIFKKIISK 228
E+F +++ +
Sbjct: 100 AELFNEMVRR 109
>ref|XP_004240455.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum lycopersicum]
Length = 589
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/79 (36%), Positives = 49/79 (62%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R M GI + + + + INS C+M+R D G V + K GF DV+ F TL++G F
Sbjct: 94 RQMQKLGIQIDGIILTSVINSYCMMHRADCGFWVLSIYLKSGFAFDVVIFTTLIRGFFAE 153
Query: 181 DRISEAQEIFKKIISKKLC 237
+++ +A E+F K++++K+C
Sbjct: 154 NKVKDAVELFIKLVTEKIC 172
>ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/70 (45%), Positives = 45/70 (64%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
+ M +G+S N T+N IN LC +NRV GLS +RG++PDV+T+ +L+KGL
Sbjct: 115 KKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCME 174
Query: 181 DRISEAQEIF 210
RISEA +F
Sbjct: 175 HRISEATRLF 184
>ref|XP_006360465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 659
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/78 (38%), Positives = 50/78 (64%)
Frame = +1
Query: 4 DMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKAD 183
+M GI ++ + INS CL+ + G SV G FFK G +V+TF TL++GLF+ +
Sbjct: 161 EMRKLGIPFDDYILTIVINSFCLLGCSENGFSVLGVFFKSGVQFNVVTFSTLMRGLFEQN 220
Query: 184 RISEAQEIFKKIISKKLC 237
+I +A +F+K++ +K+C
Sbjct: 221 KIQDAMWLFRKLVKEKIC 238
>ref|XP_006387657.1| hypothetical protein POPTR_0716s00200g, partial [Populus
trichocarpa] gi|550308014|gb|ERP46571.1| hypothetical
protein POPTR_0716s00200g, partial [Populus trichocarpa]
Length = 216
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R M +G+S N T+N IN C + VD+G SV K G PDV+ F TL+ GL K
Sbjct: 35 RPMELAGLSPNTYTLNILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPFTTLINGLCKV 94
Query: 181 DRISEAQEIFKKIISKKLC 237
+ S+A E+F + I LC
Sbjct: 95 GKFSQAVELFDETIINGLC 113
>gb|EMJ09769.1| hypothetical protein PRUPE_ppa023651mg, partial [Prunus persica]
Length = 433
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/79 (43%), Positives = 45/79 (56%)
Frame = +1
Query: 1 RDMCTSGISRNEVTMNTAINSLCLMNRVDVGLSVFGSFFKRGFVPDVITFGTLLKGLFKA 180
R SGI + T+N IN C +N++ LSV G FFK G PDV TF TL+ G
Sbjct: 5 RSSDVSGIGHDVYTLNILINCYCHLNQMGFSLSVLGKFFKLGLEPDVFTFTTLINGFLLK 64
Query: 181 DRISEAQEIFKKIISKKLC 237
+R++EA IF K+I+ C
Sbjct: 65 NRMAEAAGIFNKMIAGGNC 83