BLASTX nr result

ID: Rauwolfia21_contig00035283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00035283
         (325 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511158.1| conserved hypothetical protein [Ricinus comm...    65   9e-09
ref|XP_006351308.1| PREDICTED: F-box/LRR-repeat protein At5g6352...    57   3e-06

>ref|XP_002511158.1| conserved hypothetical protein [Ricinus communis]
           gi|223550273|gb|EEF51760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 534

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
 Frame = -3

Query: 305 DV*TLKEDLEKKSYQRTDFGITGKTN-----KEPVFGGFIFTC-------HPNVDCTPFL 162
           D+ TLK +   K+       +TG ++     ++ VFGG IF+C       HPNVD +P  
Sbjct: 416 DLATLKSESTHKNCNNPLKEVTGSSSSSSGKEKEVFGGLIFSCYLRGEIFHPNVDSSPIH 475

Query: 161 ENFPRIKRLLELSVTGIKRGHASEYTLEDQEQGDSQCCFLHFSIAVYLLLSCI 3
           ENFP +          I RG +S  + ED E+  ++CC LH+  AVYL+LS +
Sbjct: 476 ENFPGVALAGMYCNGEIGRGSSSSISQEDDEENSARCC-LHYHSAVYLVLSYV 527


>ref|XP_006351308.1| PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum
           tuberosum]
          Length = 531

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
 Frame = -3

Query: 293 LKEDLEKKSYQR-TDFGITGKTNKEPVFGGFIFTC--------HPNVDCTPFLENFPRIK 141
           LK DL+ ++  R T   +  K  K+ VFG  +F+C         P +DC+PF+ENFP I 
Sbjct: 423 LKRDLDHQNSGRSTSNNVNSK--KKSVFGCIMFSCCGRGKFFLQPILDCSPFMENFPEIT 480

Query: 140 RLLELSVTGIKRGHASEYTLEDQEQGDSQCCFLHFSIAVYLLLS 9
                S   I RG  S Y    +E    +CC LH    VYL++S
Sbjct: 481 FSGTFSAAEIARGDLSPYGPVSEEHSSLRCC-LHVYSTVYLIMS 523


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