BLASTX nr result

ID: Rauwolfia21_contig00035112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00035112
         (1848 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628330.1| hypothetical protein MTR_8g052440 [Medicago ...    68   1e-08
ref|XP_003608293.1| FBD-associated F-box protein [Medicago trunc...    68   1e-08
ref|XP_003606067.1| FBD-associated F-box protein [Medicago trunc...    68   1e-08

>ref|XP_003628330.1| hypothetical protein MTR_8g052440 [Medicago truncatula]
            gi|355522352|gb|AET02806.1| hypothetical protein
            MTR_8g052440 [Medicago truncatula]
          Length = 284

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
 Frame = +2

Query: 968  VWPPEYEKDFMCILEWHRLDKDFVNGL-RPGTVTSVCIKLNQETGGAFTDKMILLKFGEL 1144
            +WP    K F+ I+      ++  NG+   GT TS+  KLN  T  +++++ +  K   L
Sbjct: 12   LWPELVTKAFIEIMVDEVTKENMQNGVFHTGTWTSMTAKLNSTTNCSYSEEQLKAKMHSL 71

Query: 1145 RQRFKDFKFMLEHEWFSWDASTNRVSITLSHEEWESFRKTHEFAVQYCLYGEKDFYILEQ 1324
            R  F +F  +L++  F W+A TN   +T S E W+++ KTH+ A Q+   G   + +LE 
Sbjct: 72   RSMFHEFYSLLQNTEFGWNAETN--IVTASEEVWQNYLKTHDKASQFQNKGCDHYKLLEI 129

Query: 1325 MFGK 1336
            +F K
Sbjct: 130  IFNK 133


>ref|XP_003608293.1| FBD-associated F-box protein [Medicago truncatula]
            gi|355509348|gb|AES90490.1| FBD-associated F-box protein
            [Medicago truncatula]
          Length = 798

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
 Frame = +2

Query: 968  VWPPEYEKDFMCILEWHRLDKDFVNGL-RPGTVTSVCIKLNQETGGAFTDKMILLKFGEL 1144
            +WP    K F+ I+      ++  NG+   GT TS+  KLN  T  +++++ +  K   L
Sbjct: 526  LWPELVTKAFIEIMVDEVTKENMQNGVFHTGTWTSMTAKLNSTTNCSYSEEQLKAKMHSL 585

Query: 1145 RQRFKDFKFMLEHEWFSWDASTNRVSITLSHEEWESFRKTHEFAVQYCLYGEKDFYILEQ 1324
            R  F +F  +L++  F W+A TN   +T S E W+++ KTH+ A Q+   G   + +LE 
Sbjct: 586  RSMFHEFYSLLQNTEFGWNAETN--IVTASEEVWQNYLKTHDKASQFQNKGCDHYKLLEI 643

Query: 1325 MFGK 1336
            +F K
Sbjct: 644  IFNK 647


>ref|XP_003606067.1| FBD-associated F-box protein [Medicago truncatula]
            gi|355507122|gb|AES88264.1| FBD-associated F-box protein
            [Medicago truncatula]
          Length = 790

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
 Frame = +2

Query: 968  VWPPEYEKDFMCILEWHRLDKDFVNGL-RPGTVTSVCIKLNQETGGAFTDKMILLKFGEL 1144
            +WP    K F+ I+      ++  NG+   GT TS+  KLN  T  +++++ +  K   L
Sbjct: 518  LWPELVTKAFIEIMVDEVTKENMQNGVFHTGTWTSMTAKLNSTTNCSYSEEQLKAKMHSL 577

Query: 1145 RQRFKDFKFMLEHEWFSWDASTNRVSITLSHEEWESFRKTHEFAVQYCLYGEKDFYILEQ 1324
            R  F +F  +L++  F W+A TN   +T S E W+++ KTH+ A Q+   G   + +LE 
Sbjct: 578  RSMFHEFYSLLQNTEFGWNAETN--IVTASEEVWQNYLKTHDKASQFQNKGCDHYKLLEI 635

Query: 1325 MFGK 1336
            +F K
Sbjct: 636  IFNK 639


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