BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00034912
         (240 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme...    77   2e-12
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...    76   5e-12
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...    56   4e-06
ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polyme...    55   7e-06
ref|XP_002310027.1| hypothetical protein POPTRDRAFT_562706 [Popu...    55   7e-06

>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 911

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 41/76 (53%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = -2

Query: 227 SPNEVSRRLSFIGEPEIRERTDHPSTSYQLTVLSKLEFRKFFLILSYIGRKKLEEVICAD 48
           SP +V+R+LSF  EPE   R   P+ S QL +L++LEFRK FL+LSYIG KKLE+++   
Sbjct: 132 SPQKVARQLSFREEPESNCRRTSPNVSQQLMILNELEFRKLFLVLSYIGCKKLEDIVSPQ 191

Query: 47  AVDDIVR-RNLPMDAF 3
             DDIVR +NL M  F
Sbjct: 192 IADDIVRKKNLSMTDF 207


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 1011

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 42/76 (55%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
 Frame = -2

Query: 227 SPNEVSRRLSFIGEPEIRERTDHPSTSYQLTVLSKLEFRKFFLILSYIGRKKLEEVICAD 48
           SP +V+R+LSF  EPE   R   P  S QL +L++LEFRK FL+LSYIG  KLE+VI   
Sbjct: 130 SPQKVARQLSFCEEPESNCRRTSPYVSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQ 189

Query: 47  AVDDIVR-RNLPMDAF 3
             DDIVR +NL M  F
Sbjct: 190 IADDIVRKKNLSMTDF 205


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 1110

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 29/49 (59%), Positives = 35/49 (71%)
 Frame = -2

Query: 176 RERTDHPSTSYQLTVLSKLEFRKFFLILSYIGRKKLEEVICADAVDDIV 30
           R+R      S QL  LSKLEFRKFFLIL+YIGR+K+E+VI    V DI+
Sbjct: 232 RDRASTRGISEQLLALSKLEFRKFFLILNYIGRRKVEDVIMLHDVGDIL 280


>ref|XP_004251631.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 759

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = -2

Query: 182 EIRERTDHPSTSYQLTVLSKLEFRKFFLILSYIGRKKLEEVICADAVDDIV 30
           + R+R      S QL  L+KLEFRKFFLIL+YIGR+K+E+VI    V DI+
Sbjct: 174 KFRDRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVGDIL 224


>ref|XP_002310027.1| hypothetical protein POPTRDRAFT_562706 [Populus trichocarpa]
          Length = 216

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -2

Query: 176 RERTDHPSTSYQLTVLSKLEFRKFFLILSYIGRKKLEEVICADAVDDIVRRNLPMDAF 3
           R+R    +TS  L  L +LEFRK FLILSY+G K LEEV+ AD +     ++LPM+ F
Sbjct: 135 RQRGSESTTSQHLVALGELEFRKAFLILSYLGGKNLEEVVSADQIRGY--KDLPMETF 190