BLASTX nr result

ID: Rauwolfia21_contig00034911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00034911
         (243 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polyme...    77   2e-12
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...    74   3e-11

>ref|XP_006338861.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           tuberosum]
          Length = 911

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 39/76 (51%), Positives = 52/76 (68%)
 Frame = +2

Query: 14  SPNKVSRRLSFNGEPEIRERTDHPSTSYQLTVLSKLEFRKCFLILSYIGRKKLEEVICXX 193
           SP KV+R+LSF  EPE   R   P+ S QL +L++LEFRK FL+LSYIG KKLE+++   
Sbjct: 132 SPQKVARQLSFREEPESNCRRTSPNVSQQLMILNELEFRKLFLVLSYIGCKKLEDIVSPQ 191

Query: 194 XXXXIVRRRDLPMDAF 241
               IVR+++L M  F
Sbjct: 192 IADDIVRKKNLSMTDF 207


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
           lycopersicum]
          Length = 1011

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 40/76 (52%), Positives = 50/76 (65%)
 Frame = +2

Query: 14  SPNKVSRRLSFNGEPEIRERTDHPSTSYQLTVLSKLEFRKCFLILSYIGRKKLEEVICXX 193
           SP KV+R+LSF  EPE   R   P  S QL +L++LEFRK FL+LSYIG  KLE+VI   
Sbjct: 130 SPQKVARQLSFCEEPESNCRRTSPYVSQQLMILNELEFRKLFLVLSYIGCNKLEDVISPQ 189

Query: 194 XXXXIVRRRDLPMDAF 241
               IVR+++L M  F
Sbjct: 190 IADDIVRKKNLSMTDF 205


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