BLASTX nr result

ID: Rauwolfia21_contig00034692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00034692
         (596 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI72686.1| rpl32, partial [Dicerandra christmanii]                 56   6e-06
gb|AGW04333.1| ribosomal protein L32 [Secamone afzelii]                56   8e-06
ref|YP_817530.1| ribosomal protein L32 [Coffea arabica] gi|12215...    56   8e-06

>gb|AFI72686.1| rpl32, partial [Dicerandra christmanii]
          Length = 33

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = +2

Query: 344 GYWTALKAFSLGKSLSMGTSKSFFVQQT 427
           GYW ALKAFSLGKSLS+GTSKSFFVQQT
Sbjct: 1   GYWAALKAFSLGKSLSIGTSKSFFVQQT 28


>gb|AGW04333.1| ribosomal protein L32 [Secamone afzelii]
          Length = 56

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/51 (58%), Positives = 30/51 (58%)
 Frame = +2

Query: 275 MAVPXXXXXXXXXXXXXXXXXXXGYWTALKAFSLGKSLSMGTSKSFFVQQT 427
           MAVP                   GYWTALKAFSLGKSLS G SKSFFVQQT
Sbjct: 1   MAVPKKRISTSKKRIRKNIWKRKGYWTALKAFSLGKSLSTGNSKSFFVQQT 51


>ref|YP_817530.1| ribosomal protein L32 [Coffea arabica]
           gi|122153667|sp|A0A383.1|RK32_COFAR RecName: Full=50S
           ribosomal protein L32, chloroplastic
           gi|116242212|gb|ABJ89727.1| ribosomal protein L32
           [Coffea arabica]
          Length = 53

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 30/51 (58%), Positives = 30/51 (58%)
 Frame = +2

Query: 275 MAVPXXXXXXXXXXXXXXXXXXXGYWTALKAFSLGKSLSMGTSKSFFVQQT 427
           MAVP                   GYWTALKAFSLGKSLS G SKSFFVQQT
Sbjct: 1   MAVPKKRTSTSKKRIRKNIWKKKGYWTALKAFSLGKSLSTGNSKSFFVQQT 51


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