BLASTX nr result
ID: Rauwolfia21_contig00034669
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rauwolfia21_contig00034669 (365 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABL63121.1| AT-hook DNA-binding protein [Catharanthus roseus] 57 3e-06 ref|XP_002319649.1| DNA-binding family protein [Populus trichoca... 56 4e-06 ref|XP_004302076.1| PREDICTED: putative DNA-binding protein ESCA... 55 1e-05 gb|ADY38789.1| DNA-binding protein [Coffea arabica] 55 1e-05 >gb|ABL63121.1| AT-hook DNA-binding protein [Catharanthus roseus] Length = 302 Score = 57.0 bits (136), Expect = 3e-06 Identities = 40/89 (44%), Positives = 40/89 (44%) Frame = +1 Query: 37 LVASGPVMVIAATFTNATYXXXXXXXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXM 216 LVASGPVMVIAATFTNATY M Sbjct: 213 LVASGPVMVIAATFTNATYERLPLEEEATATATDAAAEGGGGGTSGAASQSHG------M 266 Query: 217 ADPASSVPLYSLPPNLVPNGQMPHEVFWT 303 AD S YSLPPNLVPNGQ EVFWT Sbjct: 267 ADDPVSPNFYSLPPNLVPNGQ---EVFWT 292 >ref|XP_002319649.1| DNA-binding family protein [Populus trichocarpa] gi|222858025|gb|EEE95572.1| DNA-binding family protein [Populus trichocarpa] Length = 284 Score = 56.2 bits (134), Expect = 4e-06 Identities = 36/85 (42%), Positives = 42/85 (49%) Frame = +1 Query: 37 LVASGPVMVIAATFTNATYXXXXXXXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXM 216 LVASGPVMVIAATF+NATY Q M Sbjct: 198 LVASGPVMVIAATFSNATYERLPLEDEEEGSGGAQGQ--------LGGGNGSGEGNGGGM 249 Query: 217 ADPASSVPLYSLPPNLVPNGQMPHE 291 DPA+S+P+Y LP N+VPNGQ+ HE Sbjct: 250 GDPATSMPVYQLP-NMVPNGQLNHE 273 >ref|XP_004302076.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Fragaria vesca subsp. vesca] Length = 306 Score = 55.1 bits (131), Expect = 1e-05 Identities = 37/91 (40%), Positives = 45/91 (49%), Gaps = 4/91 (4%) Frame = +1 Query: 37 LVASGPVMVIAATFTNATYXXXXXXXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXM 216 LVASGPVMVIAATF+NATY QP + Sbjct: 210 LVASGPVMVIAATFSNATY------ERLPLDQEEDDQPPAPNSGQPGGGGSSPPGIGGSL 263 Query: 217 ADPASSVP--LYSLPPNLVPN--GQMPHEVF 297 DP SS+P +Y+LPP+LVPN GQ+ HE + Sbjct: 264 GDPNSSMPPGVYNLPPSLVPNGGGQLSHEAY 294 >gb|ADY38789.1| DNA-binding protein [Coffea arabica] Length = 289 Score = 55.1 bits (131), Expect = 1e-05 Identities = 37/88 (42%), Positives = 44/88 (50%), Gaps = 1/88 (1%) Frame = +1 Query: 37 LVASGPVMVIAATFTNATYXXXXXXXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXM 216 LVASGPVMVIA+TF+NATY Q + Sbjct: 197 LVASGPVMVIASTFSNATYERLPIEEDEEGGGAAQGQ---LGGNGSPPLGSGGAPQQGGL 253 Query: 217 ADPASSVPLYSLPPNLVPN-GQMPHEVF 297 DP SS+P+YSLPPNL+PN GQ+ HE F Sbjct: 254 GDP-SSMPVYSLPPNLMPNGGQLNHEAF 280