BLASTX nr result
ID: Rauwolfia21_contig00034650
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00034650
(414 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct... 171 7e-41
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu... 171 7e-41
ref|NP_064003.1| orf300 gene product (mitochondrion) [Beta vulga... 171 7e-41
emb|CAN64512.1| hypothetical protein VITISV_004351 [Vitis vinifera] 129 7e-33
ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, part... 120 1e-29
emb|CBI23503.3| unnamed protein product [Vitis vinifera] 126 3e-27
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat... 105 6e-21
ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin... 97 3e-18
ref|NP_085585.1| hypothetical protein ArthMp026 [Arabidopsis tha... 87 2e-15
ref|YP_588285.1| hypothetical protein ZeamMp021 [Zea mays subsp.... 49 1e-11
ref|YP_398413.1| orf173 [Triticum aestivum] gi|78675253|dbj|BAE4... 66 4e-09
ref|YP_514677.1| hypothetical protein OrsaiPp50 [Oryza sativa In... 64 2e-08
>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
Full=NADH dehydrogenase subunit 2
gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
subunit 2 [Beta vulgaris subsp. vulgaris]
Length = 515
Score = 171 bits (434), Expect = 7e-41
Identities = 84/98 (85%), Positives = 88/98 (89%), Gaps = 3/98 (3%)
Frame = +2
Query: 20 GDRRQFSVHRTRSLPNQLRHGWECMLRKRGSDT---STVYSISLYESTITTRDEPWFGEL 190
GDRRQFSVHRTRSLPNQLRHGWECMLRK GS +VYSISLYESTITTRDEPWFGE
Sbjct: 418 GDRRQFSVHRTRSLPNQLRHGWECMLRKIGSSLIHQPSVYSISLYESTITTRDEPWFGEF 477
Query: 191 KLALGLIGLPVTARDRILRCSPPVVGTTRAGPGFDSER 304
+LALG+IGLPVTA DRILRCSPPVVGTTRAGPG +SER
Sbjct: 478 ELALGVIGLPVTAHDRILRCSPPVVGTTRAGPGLNSER 515
>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
Length = 464
Score = 171 bits (434), Expect = 7e-41
Identities = 84/98 (85%), Positives = 88/98 (89%), Gaps = 3/98 (3%)
Frame = +2
Query: 20 GDRRQFSVHRTRSLPNQLRHGWECMLRKRGSDT---STVYSISLYESTITTRDEPWFGEL 190
GDRRQFSVHRTRSLPNQLRHGWECMLRK GS +VYSISLYESTITTRDEPWFGE
Sbjct: 367 GDRRQFSVHRTRSLPNQLRHGWECMLRKIGSSLIHQPSVYSISLYESTITTRDEPWFGEF 426
Query: 191 KLALGLIGLPVTARDRILRCSPPVVGTTRAGPGFDSER 304
+LALG+IGLPVTA DRILRCSPPVVGTTRAGPG +SER
Sbjct: 427 ELALGVIGLPVTAHDRILRCSPPVVGTTRAGPGLNSER 464
>ref|NP_064003.1| orf300 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435152|ref|YP_004222370.1| hypothetical protein
BevumaM_p137 [Beta vulgaris subsp. maritima]
gi|346683243|ref|YP_004842175.1| hypothetical protein
BemaM_p131 [Beta macrocarpa] gi|9049305|dbj|BAA99315.1|
orf300 [Beta vulgaris subsp. vulgaris]
gi|317905602|emb|CBJ14009.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439885|emb|CBJ17585.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148039|emb|CBJ20703.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500161|emb|CBX24980.1|
hypothetical protein [Beta macrocarpa]
gi|384977913|emb|CBL54137.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 300
Score = 171 bits (434), Expect = 7e-41
Identities = 84/98 (85%), Positives = 88/98 (89%), Gaps = 3/98 (3%)
Frame = +2
Query: 20 GDRRQFSVHRTRSLPNQLRHGWECMLRKRGSDT---STVYSISLYESTITTRDEPWFGEL 190
GDRRQFSVHRTRSLPNQLRHGWECMLRK GS +VYSISLYESTITTRDEPWFGE
Sbjct: 203 GDRRQFSVHRTRSLPNQLRHGWECMLRKIGSSLIHQPSVYSISLYESTITTRDEPWFGEF 262
Query: 191 KLALGLIGLPVTARDRILRCSPPVVGTTRAGPGFDSER 304
+LALG+IGLPVTA DRILRCSPPVVGTTRAGPG +SER
Sbjct: 263 ELALGVIGLPVTAHDRILRCSPPVVGTTRAGPGLNSER 300
>emb|CAN64512.1| hypothetical protein VITISV_004351 [Vitis vinifera]
Length = 282
Score = 129 bits (323), Expect(2) = 7e-33
Identities = 63/65 (96%), Positives = 64/65 (98%)
Frame = +2
Query: 110 SDTSTVYSISLYESTITTRDEPWFGELKLALGLIGLPVTARDRILRCSPPVVGTTRAGPG 289
SDTSTVYSISLYESTITTRDEPWFGELKLALG+IGLPVTARDRILRCSPPVVGTTRAGPG
Sbjct: 218 SDTSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSPPVVGTTRAGPG 277
Query: 290 FDSER 304
DSER
Sbjct: 278 PDSER 282
Score = 37.4 bits (85), Expect(2) = 7e-33
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 58 LTESVATRMGMHATKERV 111
LTESVATRMGMHATK+RV
Sbjct: 199 LTESVATRMGMHATKDRV 216
>ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, partial [Eutrema
salsugineum] gi|557103035|gb|ESQ43398.1| hypothetical
protein EUTSA_v10015951mg, partial [Eutrema salsugineum]
Length = 414
Score = 120 bits (302), Expect(2) = 1e-29
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = +2
Query: 110 SDTSTVYSISLYESTITTRDEPWFGELKLALGLIGLPVTARDRILRCSPPVVGTTRAGPG 289
SDTSTVYSISL ESTITTRDEPWFGELK +LG+IGLPVTARDRI+RCSPPVVGTTRAG G
Sbjct: 350 SDTSTVYSISLVESTITTRDEPWFGELKFSLGVIGLPVTARDRIMRCSPPVVGTTRAGTG 409
Query: 290 FDSER 304
DSER
Sbjct: 410 LDSER 414
Score = 34.7 bits (78), Expect(2) = 1e-29
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1
Query: 58 LTESVATRMGMHATKERV 111
LTESVAT MGMHATK+RV
Sbjct: 331 LTESVATPMGMHATKDRV 348
>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 126 bits (316), Expect = 3e-27
Identities = 63/77 (81%), Positives = 67/77 (87%)
Frame = +2
Query: 74 RHGWECMLRKRGSDTSTVYSISLYESTITTRDEPWFGELKLALGLIGLPVTARDRILRCS 253
R G + S+TSTVYSISLYESTITTRDEPWFGELKLALG+IGLPVTARDRILRCS
Sbjct: 450 RMGMHATKHRVESNTSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCS 509
Query: 254 PPVVGTTRAGPGFDSER 304
PPVVGTTRAGPG DS+R
Sbjct: 510 PPVVGTTRAGPGPDSKR 526
>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
[Medicago truncatula]
Length = 1094
Score = 105 bits (262), Expect = 6e-21
Identities = 59/99 (59%), Positives = 64/99 (64%)
Frame = +2
Query: 110 SDTSTVYSISLYESTITTRDEPWFGELKLALGLIGLPVTARDRILRCSPPVVGTTRAGPG 289
S+TSTVYSISLYESTITTRDEPWFGELK ALG+ + C+ AG
Sbjct: 731 SETSTVYSISLYESTITTRDEPWFGELKFALGV------KKRTPSYCARSYTEVLPAGCW 784
Query: 290 FDSER*RAQKKV*IGVQNSPSHWGRKTNRHLDVIQPFLF 406
D+ R GV NSPSHWGRKTNRHLDVIQPFLF
Sbjct: 785 NDASR---------GVNNSPSHWGRKTNRHLDVIQPFLF 814
Score = 73.2 bits (178), Expect = 3e-11
Identities = 46/94 (48%), Positives = 52/94 (55%)
Frame = +1
Query: 1 PRVSQFGRPKAVLRAPDT*LTESVATRMGMHATKERV*YINRLLNILVRVHNHYTR*TLV 180
PRVSQFG PKAVLRAPDT +E+ Y L + + L
Sbjct: 711 PRVSQFGGPKAVLRAPDTVESETSTV------------YSISLYESTITTRDEPWFGELK 758
Query: 181 W*IEVGLRSNRTPSYCARSYTEVLPAGCWNDASR 282
+ + V RTPSYCARSYTEVLPAGCWNDASR
Sbjct: 759 FALGV---KKRTPSYCARSYTEVLPAGCWNDASR 789
>ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
chain 2-like, partial [Cucumis sativus]
Length = 472
Score = 96.7 bits (239), Expect = 3e-18
Identities = 58/103 (56%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Frame = +2
Query: 110 SDTSTVYSISLYESTITTRDEPWFGELKLALGLIGLPVTARDRILR----CSPPVVGTTR 277
SDTSTVYSISLYESTITTRDEPWFGELKLA R + R C+
Sbjct: 310 SDTSTVYSISLYESTITTRDEPWFGELKLA---------PRSGVXRTPSYCARSYTEVLP 360
Query: 278 AGPGFDSER*RAQKKV*IGVQNSPSHWGRKTNRHLDVIQPFLF 406
AG D+ R GV NSPSHWGRKTNRHLDV QP F
Sbjct: 361 AGCWNDASR---------GVTNSPSHWGRKTNRHLDVRQPLKF 394
Score = 72.0 bits (175), Expect = 8e-11
Identities = 48/98 (48%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Frame = +1
Query: 1 PRVSQFGRPKAVLRAPDT*LTESVATRMGMHATKERV*YINRLLNILVRVHNHYTR*TLV 180
PRVS FGRPKAVLRAPDT ES + + Y L + +
Sbjct: 290 PRVSLFGRPKAVLRAPDT--VESDTSTV----------YSISLYESTITTRDE------P 331
Query: 181 W*IEVGLRSN----RTPSYCARSYTEVLPAGCWNDASR 282
W E+ L RTPSYCARSYTEVLPAGCWNDASR
Sbjct: 332 WFGELKLAPRSGVXRTPSYCARSYTEVLPAGCWNDASR 369
>ref|NP_085585.1| hypothetical protein ArthMp026 [Arabidopsis thaliana]
gi|45477077|sp|P92563.1|M1330_ARATH RecName:
Full=Uncharacterized mitochondrial protein AtMg01330;
AltName: Full=ORF107h gi|1785786|emb|CAA69783.1| unnamed
protein product [Arabidopsis thaliana]
Length = 127
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/56 (78%), Positives = 45/56 (80%)
Frame = +1
Query: 247 VLPAGCWNDASRAGFRFRKMKGPKESINRGSKFPISLGAENESTSRCDTALSILVG 414
+LPAGCWND SR G FRKMKGPK I G KFPISLGAENESTSRCDTA S LVG
Sbjct: 1 MLPAGCWNDTSRDGPGFRKMKGPKVEIG-GYKFPISLGAENESTSRCDTAFSFLVG 55
>ref|YP_588285.1| hypothetical protein ZeamMp021 [Zea mays subsp. mays]
gi|94502600|ref|YP_588307.1| hypothetical protein
ZeamMp045 [Zea mays subsp. mays]
gi|40795038|gb|AAR91082.1| hypothetical protein
(mitochondrion) [Zea mays] gi|40795039|gb|AAR91083.1|
hypothetical protein (mitochondrion) [Zea mays]
gi|413952656|gb|AFW85305.1| putative uncharacterized
protein orf158-a2 [Zea mays]
Length = 158
Score = 48.5 bits (114), Expect(2) = 1e-11
Identities = 23/32 (71%), Positives = 26/32 (81%), Gaps = 2/32 (6%)
Frame = -3
Query: 412 QLK*KGLYHIEMSIRFPPPMRWGI--LNPYLY 323
Q K KGLYHIEMSIRFPP MRWGI L P+++
Sbjct: 102 QRKWKGLYHIEMSIRFPPQMRWGISHLCPFIF 133
Score = 46.2 bits (108), Expect(2) = 1e-11
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -2
Query: 311 PFIFLNRNPARLASFQQPAGSTSVYDRAQ 225
PFIF+ ARLASFQQP GST VYDRAQ
Sbjct: 130 PFIFMKGIEARLASFQQPTGSTPVYDRAQ 158
>ref|YP_398413.1| orf173 [Triticum aestivum] gi|78675253|dbj|BAE47678.1| orf173
[Triticum aestivum] gi|578888274|gb|AHI16378.1| orf173
(mitochondrion) [Triticum durum]
gi|578888302|gb|AHI16405.1| orf173 (mitochondrion)
[Triticum durum] gi|578888303|gb|AHI16406.1| orf173
(mitochondrion) [Triticum durum]
Length = 173
Score = 66.2 bits (160), Expect = 4e-09
Identities = 42/72 (58%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = -3
Query: 412 QLK*KGLYHIEMSIRFPPPMRWGI--LNPYLYFLLGPSSF*IETXXXXXXXXXXXXXPQY 239
Q K KGLYHIEMSIRFPP MRWGI L P++ FL G IE PQY
Sbjct: 108 QRKWKGLYHIEMSIRFPPQMRWGISHLCPFI-FLKG-----IEARPGSRRSNNRRGAPQY 161
Query: 238 TIARSNWESY*T 203
TIARSNWESY T
Sbjct: 162 TIARSNWESYYT 173
>ref|YP_514677.1| hypothetical protein OrsaiPp50 [Oryza sativa Indica Group]
gi|194033260|ref|YP_002000597.1| hypothetical protein
OrsajM_p53 [Oryza sativa Japonica Group]
gi|289065050|ref|YP_003433861.1| hypothetical protein
OrrupM_p24 [Oryza rufipogon] gi|23495421|dbj|BAC19901.1|
hypothetical protein [Oryza sativa Japonica Group]
gi|56784287|dbj|BAD81969.1| Mitchondrion orf173 [Oryza
sativa Japonica Group] gi|74100110|gb|AAZ99274.1|
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] gi|74100165|gb|AAZ99328.1| hypothetical
protein (mitochondrion) [Oryza sativa Japonica Group]
gi|74100219|gb|AAZ99381.1| hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group]
gi|285026132|dbj|BAI67965.1| hypothetical protein [Oryza
rufipogon] gi|285026182|dbj|BAI68014.1| hypothetical
protein [Oryza sativa Indica Group]
gi|285026195|dbj|BAI68027.1| hypothetical protein [Oryza
sativa Indica Group] gi|353685247|gb|AER13010.1|
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] gi|353685248|gb|AER13011.1| hypothetical
protein (mitochondrion) [Oryza sativa Indica Group]
gi|353685319|gb|AER13081.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|353685320|gb|AER13082.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277602|gb|AEZ03708.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277704|gb|AEZ03809.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|528540426|dbj|BAN67480.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540468|dbj|BAN67521.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540497|dbj|BAN67550.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
Length = 173
Score = 63.9 bits (154), Expect = 2e-08
Identities = 40/72 (55%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = -3
Query: 412 QLK*KGLYHIEMSIRFPPPMRWGI--LNPYLYFLLGPSSF*IETXXXXXXXXXXXXXPQY 239
Q K KGLYHIEMSIRFPP MRWGI L P++ F+ G I+ PQY
Sbjct: 108 QRKWKGLYHIEMSIRFPPQMRWGISHLCPFI-FMKG-----IKARPGSRRSNNRRGAPQY 161
Query: 238 TIARSNWESY*T 203
TIARSNWESY T
Sbjct: 162 TIARSNWESYYT 173