BLASTX nr result

ID: Rauwolfia21_contig00034544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00034544
         (345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006361744.1| PREDICTED: DNA replication complex GINS prot...    57   1e-10
ref|XP_004250949.1| PREDICTED: DNA replication complex GINS prot...    57   1e-10
gb|EPS66844.1| hypothetical protein M569_07932 [Genlisea aurea]        52   2e-09

>ref|XP_006361744.1| PREDICTED: DNA replication complex GINS protein SLD5-like [Solanum
           tuberosum]
          Length = 223

 Score = 57.4 bits (137), Expect(2) = 1e-10
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -1

Query: 204 GEETVYIEANDLYALPYKSIKPLVETSQIDLV 109
           GEE V IEANDLYALPYKSIKPLVE+ QIDLV
Sbjct: 192 GEEPVNIEANDLYALPYKSIKPLVESGQIDLV 223



 Score = 34.3 bits (77), Expect(2) = 1e-10
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -3

Query: 343 YVICRSKRFLGAFQLGD 293
           YVICRSK+FLG+FQL D
Sbjct: 174 YVICRSKKFLGSFQLDD 190


>ref|XP_004250949.1| PREDICTED: DNA replication complex GINS protein SLD5-like [Solanum
           lycopersicum]
          Length = 223

 Score = 57.4 bits (137), Expect(2) = 1e-10
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -1

Query: 204 GEETVYIEANDLYALPYKSIKPLVETSQIDLV 109
           GEE V IEANDLYALPYKSIKPLVE+ QIDLV
Sbjct: 192 GEEPVNIEANDLYALPYKSIKPLVESGQIDLV 223



 Score = 34.3 bits (77), Expect(2) = 1e-10
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -3

Query: 343 YVICRSKRFLGAFQLGD 293
           YVICRSK+FLG+FQL D
Sbjct: 174 YVICRSKKFLGSFQLDD 190


>gb|EPS66844.1| hypothetical protein M569_07932 [Genlisea aurea]
          Length = 223

 Score = 51.6 bits (122), Expect(2) = 2e-09
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -1

Query: 201 EETVYIEANDLYALPYKSIKPLVETSQIDLV 109
           EE + IE NDLYALPY+SIKPLVE+ QIDLV
Sbjct: 193 EEPINIEPNDLYALPYRSIKPLVESGQIDLV 223



 Score = 35.4 bits (80), Expect(2) = 2e-09
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -3

Query: 343 YVICRSKRFLGAFQLGD 293
           YVICRSKRFLG+FQL D
Sbjct: 173 YVICRSKRFLGSFQLDD 189


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