BLASTX nr result

ID: Rauwolfia21_contig00034296 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00034296
         (265 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]    58   1e-06
ref|XP_002883786.1| predicted protein [Arabidopsis lyrata subsp....    55   1e-05

>emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]
          Length = 419

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/74 (36%), Positives = 38/74 (51%)
 Frame = +1

Query: 13  DVSHPTDVAYSKVKIKRIFQPRDWPSKNLLNPIKFDQDPLQHIIYNYRDYFSAWYHFLLF 192
           D ++P  +A+SK +I R+    DW  K      K    P   + YNY DY +AWY+    
Sbjct: 153 DKNNPQXIAFSKCQILRVMTIADWNQKPFT--CKAFSQPFHPMSYNYIDYMNAWYNMFYL 210

Query: 193 RPVDHSWFIHFDKS 234
           +   HSWFI F +S
Sbjct: 211 QSYQHSWFIQFSRS 224


>ref|XP_002883786.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329626|gb|EFH60045.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/80 (38%), Positives = 39/80 (48%)
 Frame = +1

Query: 25  PTDVAYSKVKIKRIFQPRDWPSKNLLNPIKFDQDPLQHIIYNYRDYFSAWYHFLLFRPVD 204
           PT +AY+  KI RI  P D+   NL     F Q       Y Y DY +A++  L  R  D
Sbjct: 41  PTQIAYTTCKILRIQSPHDFGFLNLHTTKPFSQSGYHIQGYTYTDYQNAFFRTLCLRAFD 100

Query: 205 HSWFIHFDKSIRDIKLLPRW 264
           HSWF+ FD   R    +P W
Sbjct: 101 HSWFLSFDS--RCPNQVPGW 118


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