BLASTX nr result
ID: Rauwolfia21_contig00033841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00033841
(202 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN68286.1| hypothetical protein VITISV_017015 [Vitis vinifera] 79 3e-17
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera] 77 2e-16
emb|CAN70570.1| hypothetical protein VITISV_043111 [Vitis vinifera] 67 5e-14
gb|AAK29467.1| polyprotein-like [Solanum chilense] 74 7e-14
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 72 2e-13
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 73 2e-13
emb|CAN67644.1| hypothetical protein VITISV_028829 [Vitis vinifera] 66 3e-13
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 71 3e-13
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 72 3e-13
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera] 72 3e-13
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] 69 3e-13
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 73 6e-13
emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera] 69 3e-12
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera] 65 1e-11
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 70 1e-11
emb|CAN69040.1| hypothetical protein VITISV_031260 [Vitis vinifera] 60 2e-11
emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera] 73 4e-11
emb|CAN73144.1| hypothetical protein VITISV_001506 [Vitis vinifera] 69 8e-11
emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera] 65 1e-10
emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera] 69 2e-10
>emb|CAN68286.1| hypothetical protein VITISV_017015 [Vitis vinifera]
Length = 805
Score = 79.3 bits (194), Expect(2) = 3e-17
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
+RIRC+LSHAKLPK FWGEAMRT+V LINLSPS PL DI +RV TGK +S+
Sbjct: 711 DRIRCMLSHAKLPKSFWGEAMRTTVDLINLSPSYPLEGDITERVWTGKFVSF 762
Score = 34.3 bits (77), Expect(2) = 3e-17
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQN 50
HGI+LEK VPKTPQQN
Sbjct: 684 HGIKLEKMVPKTPQQN 699
>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 77.0 bits (188), Expect(2) = 2e-16
Identities = 37/52 (71%), Positives = 43/52 (82%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
+RIRC+LSHAKLPK FWGEAMRT V LINLSPS PL DI +R+ TGK +S+
Sbjct: 224 DRIRCMLSHAKLPKSFWGEAMRTVVDLINLSPSYPLEGDILERIWTGKFVSF 275
Score = 33.9 bits (76), Expect(2) = 2e-16
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQN 50
HGI LEK+VPKTPQQN
Sbjct: 197 HGIXLEKTVPKTPQQN 212
>emb|CAN70570.1| hypothetical protein VITISV_043111 [Vitis vinifera]
Length = 891
Score = 66.6 bits (161), Expect(2) = 5e-14
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +2
Query: 50 RIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
RIRC+LSHAKL K +W EAMR ++ LINLSPS PL DIP+RV K +S+
Sbjct: 223 RIRCMLSHAKLSKSYWSEAMRITIDLINLSPSYPLKGDIPRRVQIRKFVSF 273
Score = 36.2 bits (82), Expect(2) = 5e-14
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQN 50
HGIRLEK+VPKTPQQN
Sbjct: 195 HGIRLEKTVPKTPQQN 210
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 73.6 bits (179), Expect(2) = 7e-14
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
E++R +L AKLPK FWGEA+RT+ +LIN SPSVPL +DIP+RV T KE+SY
Sbjct: 595 EKVRSMLRMAKLPKTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNKEMSY 646
Score = 28.9 bits (63), Expect(2) = 7e-14
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQN 50
HGIR EK+VP TPQ N
Sbjct: 568 HGIRHEKTVPGTPQHN 583
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 72.0 bits (175), Expect(2) = 2e-13
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
E++R +L AKLPK FWGEA++T+ +LIN SPSVPL ++IP+RV T KE+SY
Sbjct: 594 EKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSY 645
Score = 28.9 bits (63), Expect(2) = 2e-13
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQN 50
HGIR EK+VP TPQ N
Sbjct: 567 HGIRHEKTVPGTPQHN 582
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 72.8 bits (177), Expect(2) = 2e-13
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
ER+RC+LS ++LP+ FWGEA+ T VH++NL+P VPL +D+P R+ + EISY
Sbjct: 458 ERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISY 509
Score = 28.1 bits (61), Expect(2) = 2e-13
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQNEL 56
HGIR +K+ PKTPQ N L
Sbjct: 431 HGIRHQKTPPKTPQLNGL 448
>emb|CAN67644.1| hypothetical protein VITISV_028829 [Vitis vinifera]
Length = 831
Score = 65.9 bits (159), Expect(2) = 3e-13
Identities = 31/43 (72%), Positives = 35/43 (81%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQR 175
+RIRC+ SHAKLPK FWGEAMRT++ LINLSPS L DIP R
Sbjct: 258 DRIRCMFSHAKLPKSFWGEAMRTTMDLINLSPSYHLEGDIPGR 300
Score = 34.7 bits (78), Expect(2) = 3e-13
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQN 50
HGIRL+K+VPKTPQQN
Sbjct: 231 HGIRLKKTVPKTPQQN 246
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 70.9 bits (172), Expect(2) = 3e-13
Identities = 30/52 (57%), Positives = 41/52 (78%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
ER+RC+LS AKLPK FWGEA+ T+VH+INLSP++ L ++P +V GK + Y
Sbjct: 586 ERVRCMLSKAKLPKHFWGEALYTAVHVINLSPAIALNAEVPDKVWFGKNVKY 637
Score = 29.3 bits (64), Expect(2) = 3e-13
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQNEL 56
HGIR EK+ PKTPQ N L
Sbjct: 559 HGIRHEKTPPKTPQLNGL 576
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 72.0 bits (175), Expect(2) = 3e-13
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
ER+RC+LS ++LP+ FWGEA+ T VH++NL+P VPL +D+P R+ + EISY
Sbjct: 474 ERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEISY 525
Score = 28.1 bits (61), Expect(2) = 3e-13
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQNEL 56
HGIR +K+ PKTPQ N L
Sbjct: 447 HGIRHQKTSPKTPQLNGL 464
>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
Length = 1017
Score = 72.0 bits (175), Expect(2) = 3e-13
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
ER+RC+LS ++LP+ FWGEA+ T VHL+NL+P VPL +D+P R+ + EI Y
Sbjct: 345 ERVRCLLSQSQLPRSFWGEALNTVVHLLNLTPCVPLEFDVPDRIWSNNEICY 396
Score = 28.1 bits (61), Expect(2) = 3e-13
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQNEL 56
HGIR +K+ PKTPQ N L
Sbjct: 318 HGIRHQKTPPKTPQLNGL 335
>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
Length = 776
Score = 68.6 bits (166), Expect(2) = 3e-13
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
+RIRC+LSHAKL K F GEAMRT++ LINLSPS PL D+P+RV T K +S+
Sbjct: 656 DRIRCMLSHAKLLKSFRGEAMRTTIDLINLSPSYPLEGDLPKRVLTRKFVSF 707
Score = 31.6 bits (70), Expect(2) = 3e-13
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQNEL 56
HGI+LEK V KTPQQN++
Sbjct: 629 HGIKLEKIVHKTPQQNDV 646
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 72.8 bits (177), Expect(2) = 6e-13
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
ER+RC+LS ++LP+ FWGEA+ T VH++NL+P VPL +D+P R+ + EISY
Sbjct: 571 ERVRCLLSQSQLPRSFWGEALNTIVHVLNLTPCVPLEFDVPDRIWSNNEISY 622
Score = 26.6 bits (57), Expect(2) = 6e-13
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQNEL 56
HG R +K+ PKTPQ N L
Sbjct: 544 HGFRHQKTPPKTPQLNGL 561
>emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera]
Length = 1392
Score = 68.9 bits (167), Expect(2) = 3e-12
Identities = 28/52 (53%), Positives = 41/52 (78%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
ER+RC+LS ++LP+ FWGEA+ T VH++NL+P V L +D+P R+ + EISY
Sbjct: 417 ERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVLLEFDVPDRIWSNNEISY 468
Score = 28.1 bits (61), Expect(2) = 3e-12
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQNEL 56
HGIR +K+ PKTPQ N L
Sbjct: 390 HGIRHQKTPPKTPQLNGL 407
>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
Length = 761
Score = 64.7 bits (156), Expect(2) = 1e-11
Identities = 33/52 (63%), Positives = 38/52 (73%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
+RIRC+LSH KLPK F GEAM V LINLSPS L DIP+RV GK +S+
Sbjct: 386 DRIRCMLSHTKLPKSFLGEAMTIVVDLINLSPSYTLKGDIPERVWIGKFVSF 437
Score = 30.4 bits (67), Expect(2) = 1e-11
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQN 50
H IRLEK+VPKT QQN
Sbjct: 359 HXIRLEKTVPKTXQQN 374
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 69.7 bits (169), Expect(2) = 1e-11
Identities = 29/52 (55%), Positives = 41/52 (78%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
ER RC+LSH+KLPK FWGEA+ T+ +++N SP VPL Y P+++ G++ISY
Sbjct: 591 ERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGRDISY 642
Score = 25.0 bits (53), Expect(2) = 1e-11
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQNEL 56
HGIR + + PKTPQ N L
Sbjct: 564 HGIRHQFTPPKTPQLNGL 581
>emb|CAN69040.1| hypothetical protein VITISV_031260 [Vitis vinifera]
Length = 240
Score = 59.7 bits (143), Expect(2) = 2e-11
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPL 154
+RI+C+LSHAKLPK FWGEAMR V LINL PS PL
Sbjct: 109 DRIKCMLSHAKLPKSFWGEAMRKIVDLINLPPSYPL 144
Score = 34.3 bits (77), Expect(2) = 2e-11
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQN 50
HGI+LEK VPKTPQQN
Sbjct: 82 HGIKLEKMVPKTPQQN 97
>emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
Length = 885
Score = 72.8 bits (177), Expect = 4e-11
Identities = 29/52 (55%), Positives = 42/52 (80%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
ER+RC+LS ++LP+ FWGEA+ T VH++NL+P VPL +D+P R+ + EISY
Sbjct: 381 ERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISY 432
>emb|CAN73144.1| hypothetical protein VITISV_001506 [Vitis vinifera]
Length = 283
Score = 68.6 bits (166), Expect(2) = 8e-11
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
+RIRC+LS+AKLPK FWGEAMR +V LINLSPS L DI +RV GK +S+
Sbjct: 189 DRIRCMLSYAKLPKSFWGEAMRATVGLINLSPSYSLEGDILERVWIGKFVSF 240
Score = 23.5 bits (49), Expect(2) = 8e-11
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3
Query: 12 RLEKSVPKTPQQN 50
+LEK++ KTPQQN
Sbjct: 165 QLEKTILKTPQQN 177
>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
Length = 1183
Score = 64.7 bits (156), Expect(2) = 1e-10
Identities = 26/52 (50%), Positives = 40/52 (76%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
ER+RC+LS ++LP+ FW EA+ T VH++NL+P V L +D+P ++ + EISY
Sbjct: 573 ERVRCLLSQSQLPRSFWSEALNTIVHVLNLTPCVHLEFDVPDKMWSDNEISY 624
Score = 26.6 bits (57), Expect(2) = 1e-10
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 3 HGIRLEKSVPKTPQQNEL 56
HGI+ +K+ PKTPQ N L
Sbjct: 546 HGIQHQKTPPKTPQLNGL 563
>emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera]
Length = 458
Score = 68.9 bits (167), Expect(2) = 2e-10
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = +2
Query: 47 ERIRCILSHAKLPKPFWGEAMRTSVHLINLSPSVPLGYDIPQRV*TGKEISY 202
+RI+C+L HAKLPK FWGEAMRT+V LINLSPS PL I +RV T K +S+
Sbjct: 275 DRIKCMLFHAKLPKSFWGEAMRTTVDLINLSPSYPLVGGILERVWTRKFVSF 326
Score = 21.9 bits (45), Expect(2) = 2e-10
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = +3
Query: 21 KSVPKTPQQN 50
+++PKTPQQN
Sbjct: 254 ETIPKTPQQN 263