BLASTX nr result
ID: Rauwolfia21_contig00033840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00033840
(239 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN68286.1| hypothetical protein VITISV_017015 [Vitis vinifera] 130 1e-28
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera] 129 3e-28
gb|AAK29467.1| polyprotein-like [Solanum chilense] 128 9e-28
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 126 3e-27
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 119 4e-25
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 118 7e-25
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 117 1e-24
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 116 3e-24
emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera] 115 6e-24
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera] 115 6e-24
emb|CAN70570.1| hypothetical protein VITISV_043111 [Vitis vinifera] 114 1e-23
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 112 5e-23
emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera] 112 5e-23
emb|CAN67644.1| hypothetical protein VITISV_028829 [Vitis vinifera] 111 9e-23
emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera] 111 9e-23
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 110 3e-22
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 109 3e-22
emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera] 108 1e-21
emb|CAN73144.1| hypothetical protein VITISV_001506 [Vitis vinifera] 108 1e-21
emb|CAN69040.1| hypothetical protein VITISV_031260 [Vitis vinifera] 108 1e-21
>emb|CAN68286.1| hypothetical protein VITISV_017015 [Vitis vinifera]
Length = 805
Score = 130 bits (328), Expect = 1e-28
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGI+LEK VPKTPQ NG+ ERMNRTI +RIRCMLSHAKLPK FWGEAMRT V LINLSPS
Sbjct: 684 HGIKLEKMVPKTPQQNGIVERMNRTICDRIRCMLSHAKLPKSFWGEAMRTTVDLINLSPS 743
Query: 57 VPLGYDIPQRVWTGKEISY 1
PL DI +RVWTGK +S+
Sbjct: 744 YPLEGDITERVWTGKFVSF 762
>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 129 bits (325), Expect = 3e-28
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGI LEK+VPKTPQ NGV ERMNRTI +RIRCMLSHAKLPK FWGEAMRT V LINLSPS
Sbjct: 197 HGIXLEKTVPKTPQQNGVVERMNRTICDRIRCMLSHAKLPKSFWGEAMRTVVDLINLSPS 256
Query: 57 VPLGYDIPQRVWTGKEISY 1
PL DI +R+WTGK +S+
Sbjct: 257 YPLEGDILERIWTGKFVSF 275
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 128 bits (321), Expect = 9e-28
Identities = 60/79 (75%), Positives = 68/79 (86%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIR EK+VP TPQHNGVAERMNRTI E++R ML AKLPK FWGEA+RTA +LIN SPS
Sbjct: 568 HGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKTFWGEAVRTACYLINRSPS 627
Query: 57 VPLGYDIPQRVWTGKEISY 1
VPL +DIP+RVWT KE+SY
Sbjct: 628 VPLEFDIPERVWTNKEMSY 646
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 126 bits (317), Expect = 3e-27
Identities = 58/79 (73%), Positives = 68/79 (86%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIR EK+VP TPQHNGVAERMNRTI E++R ML AKLPK FWGEA++TA +LIN SPS
Sbjct: 567 HGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPS 626
Query: 57 VPLGYDIPQRVWTGKEISY 1
VPL ++IP+RVWT KE+SY
Sbjct: 627 VPLAFEIPERVWTNKEVSY 645
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 119 bits (298), Expect = 4e-25
Identities = 53/79 (67%), Positives = 65/79 (82%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIR EK+ PKTPQ NG+AERMNRT+ ER+RCMLS AKLPK FWGEA+ TAVH+INLSP+
Sbjct: 559 HGIRHEKTPPKTPQLNGLAERMNRTLIERVRCMLSKAKLPKHFWGEALYTAVHVINLSPA 618
Query: 57 VPLGYDIPQRVWTGKEISY 1
+ L ++P +VW GK + Y
Sbjct: 619 IALNAEVPDKVWFGKNVKY 637
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 118 bits (296), Expect = 7e-25
Identities = 49/79 (62%), Positives = 66/79 (83%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIR +K+ PKTPQ NG+AERMNRT+ ER+RC+LS ++LP+ FWGEA+ T VH++NL+P
Sbjct: 431 HGIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPC 490
Query: 57 VPLGYDIPQRVWTGKEISY 1
VPL +D+P R+W+ EISY
Sbjct: 491 VPLEFDVPDRIWSNNEISY 509
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 117 bits (294), Expect = 1e-24
Identities = 49/79 (62%), Positives = 66/79 (83%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIR +K+ PKTPQ NG+AERMNRT+ ER+RC+LS ++LP+ FWGEA+ T VH++NL+P
Sbjct: 447 HGIRHQKTSPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPC 506
Query: 57 VPLGYDIPQRVWTGKEISY 1
VPL +D+P R+W+ EISY
Sbjct: 507 VPLEFDVPDRIWSKNEISY 525
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 116 bits (291), Expect = 3e-24
Identities = 48/79 (60%), Positives = 65/79 (82%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HG R +K+ PKTPQ NG+AERMNRT+ ER+RC+LS ++LP+ FWGEA+ T VH++NL+P
Sbjct: 544 HGFRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWGEALNTIVHVLNLTPC 603
Query: 57 VPLGYDIPQRVWTGKEISY 1
VPL +D+P R+W+ EISY
Sbjct: 604 VPLEFDVPDRIWSNNEISY 622
>emb|CAN74280.1| hypothetical protein VITISV_010268 [Vitis vinifera]
Length = 761
Score = 115 bits (288), Expect = 6e-24
Identities = 57/79 (72%), Positives = 62/79 (78%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
H IRLEK+VPKT Q NGVAERMNRTI +RIRCMLSH KLPK F GEAM V LINLSPS
Sbjct: 359 HXIRLEKTVPKTXQQNGVAERMNRTICDRIRCMLSHTKLPKSFLGEAMTIVVDLINLSPS 418
Query: 57 VPLGYDIPQRVWTGKEISY 1
L DIP+RVW GK +S+
Sbjct: 419 YTLKGDIPERVWIGKFVSF 437
>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
Length = 1017
Score = 115 bits (288), Expect = 6e-24
Identities = 48/79 (60%), Positives = 64/79 (81%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIR +K+ PKTPQ NG+AE MNRT+ ER+RC+LS ++LP+ FWGEA+ T VHL+NL+P
Sbjct: 318 HGIRHQKTPPKTPQLNGLAESMNRTLVERVRCLLSQSQLPRSFWGEALNTVVHLLNLTPC 377
Query: 57 VPLGYDIPQRVWTGKEISY 1
VPL +D+P R+W+ EI Y
Sbjct: 378 VPLEFDVPDRIWSNNEICY 396
>emb|CAN70570.1| hypothetical protein VITISV_043111 [Vitis vinifera]
Length = 891
Score = 114 bits (286), Expect = 1e-23
Identities = 56/79 (70%), Positives = 63/79 (79%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIRLEK+VPKTPQ NGVA+RMNRTI RIRCMLSHAKL K +W EAMR + LINLSPS
Sbjct: 195 HGIRLEKTVPKTPQQNGVAKRMNRTICYRIRCMLSHAKLSKSYWSEAMRITIDLINLSPS 254
Query: 57 VPLGYDIPQRVWTGKEISY 1
PL DIP+RV K +S+
Sbjct: 255 YPLKGDIPRRVQIRKFVSF 273
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 112 bits (280), Expect = 5e-23
Identities = 49/79 (62%), Positives = 64/79 (81%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIR + + PKTPQ NG+AERMNRT+ ER RC+LSH+KLPK FWGEA+ TA +++N SP
Sbjct: 564 HGIRHQFTPPKTPQLNGLAERMNRTLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSPC 623
Query: 57 VPLGYDIPQRVWTGKEISY 1
VPL Y P+++W G++ISY
Sbjct: 624 VPLQYKAPEKIWLGRDISY 642
>emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera]
Length = 1392
Score = 112 bits (280), Expect = 5e-23
Identities = 47/79 (59%), Positives = 64/79 (81%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIR +K+ PKTPQ NG+AERMN T+ ER+RC+LS ++LP+ FWGEA+ T VH++NL+P
Sbjct: 390 HGIRHQKTPPKTPQLNGLAERMNMTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPC 449
Query: 57 VPLGYDIPQRVWTGKEISY 1
V L +D+P R+W+ EISY
Sbjct: 450 VLLEFDVPDRIWSNNEISY 468
>emb|CAN67644.1| hypothetical protein VITISV_028829 [Vitis vinifera]
Length = 831
Score = 111 bits (278), Expect = 9e-23
Identities = 54/70 (77%), Positives = 58/70 (82%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGIRL+K+VPKTPQ NGVAERMNRT +RIRCM SHAKLPK FWGEAMRT + LINLSPS
Sbjct: 231 HGIRLKKTVPKTPQQNGVAERMNRTFYDRIRCMFSHAKLPKSFWGEAMRTTMDLINLSPS 290
Query: 57 VPLGYDIPQR 28
L DIP R
Sbjct: 291 YHLEGDIPGR 300
>emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
Length = 885
Score = 111 bits (278), Expect = 9e-23
Identities = 46/79 (58%), Positives = 63/79 (79%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
H IR +K+ PKTPQ NG+ ERMN T+ ER+RC+LS ++LP+ FWGEA+ T VH++NL+P
Sbjct: 354 HRIRHQKTPPKTPQLNGLTERMNXTLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTPC 413
Query: 57 VPLGYDIPQRVWTGKEISY 1
VPL +D+P R+W+ EISY
Sbjct: 414 VPLEFDVPDRIWSNNEISY 432
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 110 bits (274), Expect = 3e-22
Identities = 46/79 (58%), Positives = 63/79 (79%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
H IR +K+ PKTPQ NG+AERMNRT+ ER+RC+LS ++LP+ FW EA+ T VH++NL+P
Sbjct: 515 HDIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWDEALNTVVHVLNLTPC 574
Query: 57 VPLGYDIPQRVWTGKEISY 1
VPL +D+ R+W+ EISY
Sbjct: 575 VPLEFDVSDRIWSNNEISY 593
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 109 bits (273), Expect = 3e-22
Identities = 49/79 (62%), Positives = 62/79 (78%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
+GIR +K+ PK PQ NG+AERMNRTI ER+RCML AKLP FW EA+ TAVH+INLSP
Sbjct: 562 YGIRHQKTPPKIPQLNGLAERMNRTIMERVRCMLDDAKLPSSFWAEAVSTAVHVINLSPV 621
Query: 57 VPLGYDIPQRVWTGKEISY 1
+ L ++P +VW GK++SY
Sbjct: 622 IALKNEVPDKVWCGKDVSY 640
>emb|CAN66213.1| hypothetical protein VITISV_005090 [Vitis vinifera]
Length = 458
Score = 108 bits (269), Expect = 1e-21
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = -3
Query: 219 KSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPSVPLGYD 40
+++PKTPQ NG+ ERMNRTI +RI+CML HAKLPK FWGEAMRT V LINLSPS PL
Sbjct: 254 ETIPKTPQQNGIVERMNRTICDRIKCMLFHAKLPKSFWGEAMRTTVDLINLSPSYPLVGG 313
Query: 39 IPQRVWTGKEISY 1
I +RVWT K +S+
Sbjct: 314 ILERVWTRKFVSF 326
>emb|CAN73144.1| hypothetical protein VITISV_001506 [Vitis vinifera]
Length = 283
Score = 108 bits (269), Expect = 1e-21
Identities = 53/76 (69%), Positives = 61/76 (80%)
Frame = -3
Query: 228 RLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPSVPL 49
+LEK++ KTPQ NGVAERMN TI +RIRCMLS+AKLPK FWGEAMR V LINLSPS L
Sbjct: 165 QLEKTILKTPQQNGVAERMNTTIYDRIRCMLSYAKLPKSFWGEAMRATVGLINLSPSYSL 224
Query: 48 GYDIPQRVWTGKEISY 1
DI +RVW GK +S+
Sbjct: 225 EGDILERVWIGKFVSF 240
>emb|CAN69040.1| hypothetical protein VITISV_031260 [Vitis vinifera]
Length = 240
Score = 108 bits (269), Expect = 1e-21
Identities = 51/63 (80%), Positives = 54/63 (85%)
Frame = -3
Query: 237 HGIRLEKSVPKTPQHNGVAERMNRTIAERIRCMLSHAKLPKPFWGEAMRTAVHLINLSPS 58
HGI+LEK VPKTPQ NGVAERMNRTI +RI+CMLSHAKLPK FWGEAMR V LINL PS
Sbjct: 82 HGIKLEKMVPKTPQQNGVAERMNRTICDRIKCMLSHAKLPKSFWGEAMRKIVDLINLPPS 141
Query: 57 VPL 49
PL
Sbjct: 142 YPL 144