BLASTX nr result

ID: Rauwolfia21_contig00033745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00033745
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe...    65   9e-09
gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus...    60   4e-07
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...    60   4e-07
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...    59   5e-07
emb|CBI40152.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...    59   5e-07
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...    59   9e-07
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...    58   1e-06
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...    58   1e-06
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...    58   1e-06
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    58   1e-06
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...    57   3e-06
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    57   3e-06
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...    56   6e-06

>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/43 (74%), Positives = 35/43 (81%)
 Frame = +2

Query: 188 MEESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           MEE+ SS IL+G IT IKF LATHQEIC +SIS C ISHASQL
Sbjct: 1   MEEASSSTILEGEITGIKFGLATHQEICTASISNCAISHASQL 43


>gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
          Length = 2052

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = +2

Query: 188 MEESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           MEE+P S++LDG++  +KF +AT QEIC +SIS+  ISHASQL
Sbjct: 1   MEENPPSSVLDGMVVGVKFGMATRQEICTASISDSSISHASQL 43


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
           gi|550343552|gb|EEE78905.2| hypothetical protein
           POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +2

Query: 188 MEESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           M+E+  S+I DG IT I+F LAT +EIC +SIS+CPISH+SQL
Sbjct: 1   MDENSQSSIFDGEITGIRFGLATQKEICTASISDCPISHSSQL 43


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
           max]
          Length = 2020

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +2

Query: 188 MEESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           ME++P S++LDG +  IKF +AT QEIC +SISE  ISHASQL
Sbjct: 1   MEDNPPSSVLDGTVVGIKFGMATRQEICTASISESSISHASQL 43


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 194 ESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           E  SS ILDG I+ I+F LAT QEIC +S+S+CPISHASQL
Sbjct: 2   EEDSSTILDGEISGIRFGLATRQEICIASVSDCPISHASQL 42


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = +2

Query: 194 ESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           E  SS ILDG I+ I+F LAT QEIC +S+S+CPISHASQL
Sbjct: 2   EEDSSTILDGEISGIRFGLATRQEICIASVSDCPISHASQL 42


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +2

Query: 188 MEESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           ME S  + + +G+I+ I F LAT QEICKSSIS+CPI+HASQL
Sbjct: 1   MENSSVATVPEGMISGISFGLATFQEICKSSISDCPITHASQL 43


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
           max]
          Length = 2082

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/43 (60%), Positives = 34/43 (79%)
 Frame = +2

Query: 188 MEESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           ME++P S++LDG +  IKF +AT QEIC +SIS+  ISHASQL
Sbjct: 1   MEDNPPSSVLDGTVVGIKFGMATRQEICTASISDSSISHASQL 43


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
           sinensis]
          Length = 1865

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +2

Query: 188 MEESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           MEE+ SS IL+G I  I+F LAT +EIC +SIS+C ISHASQL
Sbjct: 1   MEENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQL 43


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
           gi|557522591|gb|ESR33958.1| hypothetical protein
           CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +2

Query: 188 MEESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           MEE+ SS IL+G I  I+F LAT +EIC +SIS+C ISHASQL
Sbjct: 1   MEENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQL 43


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1 [Solanum lycopersicum]
          Length = 1632

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +2

Query: 191 EESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           E+S SS + DGI+  IKF LAT QEICKSSIS+CPI+H S L
Sbjct: 3   EKSLSSKVSDGIVKRIKFGLATPQEICKSSISDCPITHPSLL 44


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
           sativus]
          Length = 1959

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = +2

Query: 188 MEESPS-SAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           MEE+PS S+ILD  I  I+FSLA  QEIC ++IS+CPI+HASQL
Sbjct: 1   MEEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQL 44


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1-like [Cucumis sativus]
          Length = 2019

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = +2

Query: 188 MEESPS-SAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           MEE+PS S+ILD  I  I+FSLA  QEIC ++IS+CPI+HASQL
Sbjct: 1   MEEAPSCSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQL 44


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
           vesca subsp. vesca]
          Length = 1991

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +2

Query: 188 MEESPSSAILDGIITAIKFSLATHQEICKSSISECPISHASQL 316
           MEE+  S +LDG +  I+F LATHQEIC +S+  C ISHASQL
Sbjct: 1   MEEASCSPVLDGELIGIRFGLATHQEICTASMMGCSISHASQL 43


Top