BLASTX nr result
ID: Rauwolfia21_contig00033683
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00033683
(439 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi... 223 2e-56
gb|EOY09049.1| Pentatricopeptide repeat (PPR) superfamily protei... 217 1e-54
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis] 216 3e-54
ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containi... 205 4e-51
ref|XP_002322628.1| pentatricopeptide repeat-containing family p... 204 8e-51
gb|EMJ05621.1| hypothetical protein PRUPE_ppb002215mg [Prunus pe... 203 2e-50
ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containi... 199 4e-49
ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 197 1e-48
ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containi... 193 2e-47
ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containi... 191 9e-47
ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 189 3e-46
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi... 189 3e-46
ref|XP_002529164.1| pentatricopeptide repeat-containing protein,... 188 7e-46
ref|XP_003589755.1| Pentatricopeptide repeat-containing protein ... 187 1e-45
gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus... 186 4e-45
ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutr... 186 4e-45
gb|EMT01545.1| hypothetical protein F775_52571 [Aegilops tauschii] 186 4e-45
ref|XP_002881370.1| pentatricopeptide repeat-containing protein ... 184 1e-44
dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare] 183 2e-44
ref|NP_181048.1| pentatricopeptide repeat-containing protein [Ar... 183 2e-44
>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 223 bits (568), Expect = 2e-56
Identities = 104/146 (71%), Positives = 123/146 (84%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNT+++ LA+ GRI+EA FDRMP +++ISWT+MIAGL +NGRIDEAR+LF+RM
Sbjct: 175 RNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRM 234
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN MITGY QN+R EA DLF+RMPE+D SWNTMITG IQNGDLR A++LFN
Sbjct: 235 PERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFN 294
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
E PKKNVISWTTMI G Q+ + EEA
Sbjct: 295 EMPKKNVISWTTMITGCVQEGESEEA 320
Score = 129 bits (324), Expect = 4e-28
Identities = 63/146 (43%), Positives = 99/146 (67%), Gaps = 1/146 (0%)
Frame = +2
Query: 5 NVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERMP 184
NV N ++T+L+K GRI EA FD M ++I+WT++I+G ++ G I+EAR LF+R+
Sbjct: 51 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 110
Query: 185 -ERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
++N V+W M+ GY+++ + ++A LF MP K+ SWNTMI G QNG + +A LF
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 170
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ P++NV+SW T+++ AQ + EEA
Sbjct: 171 KMPERNVVSWNTVMSMLAQCGRIEEA 196
Score = 84.7 bits (208), Expect = 1e-14
Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R++ SWNT++T L ++G ++ A F+ MP KN+ISWT+MI G ++ G +EA +F RM
Sbjct: 268 RDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRM 327
Query: 182 PERNAVSWN----MMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQN-----GD 334
N N + + G N+ ++ K +T + + N G+
Sbjct: 328 LSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGE 387
Query: 335 LRTAKRLFNE--TPKKNVISWTTMINGYAQDNQGEEA 439
L TA+++F++ T +++++SW +I YA G+EA
Sbjct: 388 LGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEA 424
>gb|EOY09049.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
isoform 1 [Theobroma cacao] gi|508717153|gb|EOY09050.1|
Pentatricopeptide repeat (PPR) superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 631
Score = 217 bits (552), Expect = 1e-54
Identities = 97/146 (66%), Positives = 125/146 (85%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNT+LT+LA+ GR+++A FDRMP +++ISWT+M+AGL +NG+IDEAR +F+RM
Sbjct: 171 RNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVAGLAKNGKIDEARRVFDRM 230
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN MITGY QNM+ EAF+LF+RMPE++ SSWN MITG IQNG+L+ A++LF+
Sbjct: 231 PERNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEKLFD 290
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ P+KNV+SWTTMI GY QD Q EEA
Sbjct: 291 KVPRKNVVSWTTMITGYVQDEQSEEA 316
Score = 147 bits (371), Expect = 1e-33
Identities = 66/146 (45%), Positives = 97/146 (66%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NVV+W +L+ + RI EA FD MPVKN++SW +M+ G ++NG + +A LF+ M
Sbjct: 109 KNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFELFQEM 168
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN M+T Q R +A LF RMP++D SW M+ G +NG + A+R+F+
Sbjct: 169 PERNVVSWNTMLTALAQCGRVEDARGLFDRMPKRDVISWTAMVAGLAKNGKIDEARRVFD 228
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P++NV+SW MI GY+Q+ + +EA
Sbjct: 229 RMPERNVVSWNAMITGYSQNMKLDEA 254
Score = 142 bits (359), Expect = 4e-32
Identities = 65/147 (44%), Positives = 103/147 (70%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRM-PVKNLISWTSMIAGLLRNGRIDEARILFER 178
++V++W +++ K G I+EA FDR+ KN+++WT+M++G +R+ RI EA+ LF+
Sbjct: 77 KDVITWTALISGYIKLGLIEEARRLFDRVDSKKNVVTWTAMLSGYMRSNRILEAKRLFDE 136
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP +N VSWN M+ GY+QN +AF+LF+ MPE++ SWNTM+T Q G + A+ LF
Sbjct: 137 MPVKNVVSWNTMVDGYVQNGMVGKAFELFQEMPERNVVSWNTMLTALAQCGRVEDARGLF 196
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
+ PK++VISWT M+ G A++ + +EA
Sbjct: 197 DRMPKRDVISWTAMVAGLAKNGKIDEA 223
Score = 128 bits (321), Expect = 9e-28
Identities = 63/148 (42%), Positives = 98/148 (66%), Gaps = 3/148 (2%)
Frame = +2
Query: 5 NVVSWNTILTSLAKHGRIQEANDFFDRMPV--KNLISWTSMIAGLLRNGRIDEARILFER 178
+V N ++T L+ G+I + FD+MP K++I+WT++I+G ++ G I+EAR LF+R
Sbjct: 45 SVAQSNWLITKLSTEGKISQVRKLFDQMPDRDKDVITWTALISGYIKLGLIEEARRLFDR 104
Query: 179 MP-ERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRL 355
+ ++N V+W M++GYM++ R EA LF MP K+ SWNTM+ G +QNG + A L
Sbjct: 105 VDSKKNVVTWTAMLSGYMRSNRILEAKRLFDEMPVKNVVSWNTMVDGYVQNGMVGKAFEL 164
Query: 356 FNETPKKNVISWTTMINGYAQDNQGEEA 439
F E P++NV+SW TM+ AQ + E+A
Sbjct: 165 FQEMPERNVVSWNTMLTALAQCGRVEDA 192
Score = 105 bits (261), Expect = 8e-21
Identities = 58/188 (30%), Positives = 98/188 (52%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN ++T +++ ++ EA + F+RMP +NL SW +MI G ++NG + A LF+++
Sbjct: 233 RNVVSWNAMITGYSQNMKLDEAFELFERMPERNLSSWNAMITGFIQNGELKRAEKLFDKV 292
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKD-----TSSWNTMITGC--------- 319
P +N VSW MITGY+Q+ + EA +F +M +D ++ ++++ C
Sbjct: 293 PRKNVVSWTTMITGYVQDEQSEEALKIFSKMMAEDGVKPNEGTFVSVLSACSDLAGLFEG 352
Query: 320 --------------------------IQNGDLRTAKRLFNE--TPKKNVISWTTMINGYA 415
+ G+L A+R+F++ +++V+SW MI YA
Sbjct: 353 QQVHQTLAKTIYQCSEIVVSAIINMYSKCGELNAARRMFDDGLISQRDVVSWNGMIAAYA 412
Query: 416 QDNQGEEA 439
G EA
Sbjct: 413 HHGCGGEA 420
>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
Length = 622
Score = 216 bits (549), Expect = 3e-54
Identities = 99/146 (67%), Positives = 122/146 (83%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNTI+T+LA+ GR++EA FD MP +++ISWT+M+AG RNGRIDEAR++F+RM
Sbjct: 166 RNVVSWNTIITALAQSGRMEEARRLFDMMPERDVISWTTMVAGFSRNGRIDEARVVFDRM 225
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P +N VSWN MITGY QNMR EAF+LF+RMPE++ SSWNTMITG IQNG+L+ A LFN
Sbjct: 226 PVQNVVSWNAMITGYAQNMRLNEAFELFERMPERNLSSWNTMITGFIQNGELKRASNLFN 285
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ P+KN ISWTTMI+GY QD Q EEA
Sbjct: 286 KMPEKNSISWTTMISGYIQDGQNEEA 311
Score = 147 bits (370), Expect = 2e-33
Identities = 71/147 (48%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPV-KNLISWTSMIAGLLRNGRIDEARILFER 178
R+V++W T++T A+ G I+EA FDR K++I+WT M+ G LR RI EA LF
Sbjct: 72 RDVITWTTVITGYARCGMIEEARKLFDRADAKKDVITWTVMVNGYLRLRRIKEAERLFFE 131
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP +N VSWN MI GY QN R A LF RMPE++ SWNT+IT Q+G + A+RLF
Sbjct: 132 MPVKNVVSWNTMIEGYFQNGRVNSALGLFDRMPERNVVSWNTIITALAQSGRMEEARRLF 191
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
+ P+++VISWTTM+ G++++ + +EA
Sbjct: 192 DMMPERDVISWTTMVAGFSRNGRIDEA 218
Score = 142 bits (358), Expect = 5e-32
Identities = 67/146 (45%), Positives = 95/146 (65%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
++V++W ++ + RI+EA F MPVKN++SW +MI G +NGR++ A LF+RM
Sbjct: 104 KDVITWTVMVNGYLRLRRIKEAERLFFEMPVKNVVSWNTMIEGYFQNGRVNSALGLFDRM 163
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN +IT Q+ R EA LF MPE+D SW TM+ G +NG + A+ +F+
Sbjct: 164 PERNVVSWNTIITALAQSGRMEEARRLFDMMPERDVISWTTMVAGFSRNGRIDEARVVFD 223
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P +NV+SW MI GYAQ+ + EA
Sbjct: 224 RMPVQNVVSWNAMITGYAQNMRLNEA 249
Score = 135 bits (340), Expect = 6e-30
Identities = 68/152 (44%), Positives = 97/152 (63%), Gaps = 10/152 (6%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+V+SW T++ +++GRI EA FDRMPV+N++SW +MI G +N R++EA LFERM
Sbjct: 197 RDVISWTTMVAGFSRNGRIDEARVVFDRMPVQNVVSWNAMITGYAQNMRLNEAFELFERM 256
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF- 358
PERN SWN MITG++QN A +LF +MPEK++ SW TMI+G IQ+G A ++F
Sbjct: 257 PERNLSSWNTMITGFIQNGELKRASNLFNKMPEKNSISWTTMISGYIQDGQNEEALKMFT 316
Query: 359 ---------NETPKKNVISWTTMINGYAQDNQ 427
NE +V+S + + G + Q
Sbjct: 317 KMVVDGIRPNEATFASVLSACSNLAGLGEGQQ 348
Score = 128 bits (322), Expect = 7e-28
Identities = 64/141 (45%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Frame = +2
Query: 20 NTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERMP-ERNA 196
N LT L+K GRI +A FD MP +++I+WT++I G R G I+EAR LF+R +++
Sbjct: 47 NWWLTKLSKSGRIGDARQVFDEMPDRDVITWTTVITGYARCGMIEEARKLFDRADAKKDV 106
Query: 197 VSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFNETPKK 376
++W +M+ GY++ R EA LF MP K+ SWNTMI G QNG + +A LF+ P++
Sbjct: 107 ITWTVMVNGYLRLRRIKEAERLFFEMPVKNVVSWNTMIEGYFQNGRVNSALGLFDRMPER 166
Query: 377 NVISWTTMINGYAQDNQGEEA 439
NV+SW T+I AQ + EEA
Sbjct: 167 NVVSWNTIITALAQSGRMEEA 187
>ref|XP_004308620.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 714
Score = 205 bits (522), Expect = 4e-51
Identities = 96/146 (65%), Positives = 116/146 (79%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNT+LT+LA+ GRI+EA F MP +++ISWT+M+AGL RNGR+DEAR +F+RM
Sbjct: 173 RNVVSWNTVLTALAQCGRIEEARRLFGLMPERDVISWTAMVAGLSRNGRVDEAREVFDRM 232
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P RN VSWN M+TGY QN R EA +LF+RMPE+D SWNTM+TG IQNGDL A LF
Sbjct: 233 PRRNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWNTMVTGFIQNGDLERAWELFV 292
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ P+KNVISWTTMI GY QD + EEA
Sbjct: 293 QMPQKNVISWTTMITGYVQDGRNEEA 318
Score = 149 bits (376), Expect = 4e-34
Identities = 68/147 (46%), Positives = 104/147 (70%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMP-VKNLISWTSMIAGLLRNGRIDEARILFER 178
R+VV+W T++T+ K G ++EA FDR VKN+I+WT+++ G +R R++EA +LF +
Sbjct: 79 RDVVTWTTVITAYVKSGMLEEARSLFDRADAVKNVITWTALVGGYIRLRRLEEAEMLFYQ 138
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP RN VSWN MI GY ++ R EA +LF+RMPE++ SWNT++T Q G + A+RLF
Sbjct: 139 MPVRNVVSWNTMIDGYARSRRVDEALELFERMPERNVVSWNTVLTALAQCGRIEEARRLF 198
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
P+++VISWT M+ G +++ + +EA
Sbjct: 199 GLMPERDVISWTAMVAGLSRNGRVDEA 225
Score = 144 bits (362), Expect = 2e-32
Identities = 66/146 (45%), Positives = 96/146 (65%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NV++W ++ + R++EA F +MPV+N++SW +MI G R+ R+DEA LFERM
Sbjct: 111 KNVITWTALVGGYIRLRRLEEAEMLFYQMPVRNVVSWNTMIDGYARSRRVDEALELFERM 170
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN ++T Q R EA LF MPE+D SW M+ G +NG + A+ +F+
Sbjct: 171 PERNVVSWNTVLTALAQCGRIEEARRLFGLMPERDVISWTAMVAGLSRNGRVDEAREVFD 230
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P++NV+SW M+ GYAQ+ + EEA
Sbjct: 231 RMPRRNVVSWNAMVTGYAQNGRLEEA 256
Score = 133 bits (334), Expect = 3e-29
Identities = 57/121 (47%), Positives = 88/121 (72%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+V+SW ++ L+++GR+ EA + FDRMP +N++SW +M+ G +NGR++EA LFERM
Sbjct: 204 RDVISWTAMVAGLSRNGRVDEAREVFDRMPRRNVVSWNAMVTGYAQNGRLEEALELFERM 263
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PER+ SWN M+TG++QN A++LF +MP+K+ SW TMITG +Q+G A +F+
Sbjct: 264 PERDMPSWNTMVTGFIQNGDLERAWELFVQMPQKNVISWTTMITGYVQDGRNEEALMIFS 323
Query: 362 E 364
+
Sbjct: 324 K 324
Score = 102 bits (255), Expect = 4e-20
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN ++T A++GR++EA + F+RMP +++ SW +M+ G ++NG ++ A LF +M
Sbjct: 235 RNVVSWNAMVTGYAQNGRLEEALELFERMPERDMPSWNTMVTGFIQNGDLERAWELFVQM 294
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWN-------------------- 301
P++N +SW MITGY+Q+ R EA +F +M + + N
Sbjct: 295 PQKNVISWTTMITGYVQDGRNEEALMIFSKMVVDNGARPNEGTFVSILSACSNLAGLCEG 354
Query: 302 ---------TMITGCI-----------QNGDLRTAKRLFNE--TPKKNVISWTTMINGYA 415
T+ C+ + G+L +A+++F + T ++ ISW MI YA
Sbjct: 355 RQMHQMIIKTVYQECVHLVSALINMYSKCGELVSARKMFEDGSTIHRDYISWNGMIAAYA 414
Query: 416 QDNQGEEA 439
G EA
Sbjct: 415 HHGCGTEA 422
>ref|XP_002322628.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222867258|gb|EEF04389.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 559
Score = 204 bits (520), Expect = 8e-51
Identities = 90/146 (61%), Positives = 119/146 (81%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RN+VSWN ++ +L + GR++EA FD MP +++ISWT+M+ GL R+GR+DEAR +F+RM
Sbjct: 98 RNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRM 157
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN M+TGY +NMR EAFDLF+RMPE++ SSWNTMITG IQNG+L A+++FN
Sbjct: 158 PERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFN 217
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
E P+KNV+SWTTMI GY Q+ + E A
Sbjct: 218 EMPEKNVVSWTTMITGYVQEGESESA 243
Score = 136 bits (342), Expect = 3e-30
Identities = 67/143 (46%), Positives = 92/143 (64%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+V+SW T++ LA+ GR+ EA FDRMP +N++SW +M+ G +N R+DEA LFERM
Sbjct: 129 RDVISWTTMVMGLARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLFERM 188
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN SWN MITG++QN A +F MPEK+ SW TMITG +Q G+ +A ++F
Sbjct: 189 PERNLSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFV 248
Query: 362 ETPKKNVISWTTMINGYAQDNQG 430
E K +G A+ N+G
Sbjct: 249 EMIK----------DGGARPNEG 261
Score = 135 bits (340), Expect = 6e-30
Identities = 64/147 (43%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMP-VKNLISWTSMIAGLLRNGRIDEARILFER 178
R+VV+W +++ K G I +A FDR+ +K++++WT+M++G +R RI+EA LFE
Sbjct: 4 RDVVTWTAVISGYIKCGLIVDARRLFDRVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEV 63
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP +N VSWN MI GY +N +A ++F+RM E++ SWN +I +Q G + A+R F
Sbjct: 64 MPVKNVVSWNTMIDGYGKNREVDKAIEVFERMHERNMVSWNAVIAALVQCGRVEEARRRF 123
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
+E PK++VISWTTM+ G A+ + +EA
Sbjct: 124 DEMPKRDVISWTTMVMGLARSGRVDEA 150
Score = 131 bits (330), Expect = 8e-29
Identities = 61/146 (41%), Positives = 96/146 (65%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
++VV+W +L+ + RI+EA F+ MPVKN++SW +MI G +N +D+A +FERM
Sbjct: 36 KDVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERM 95
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
ERN VSWN +I +Q R EA F MP++D SW TM+ G ++G + A+++F+
Sbjct: 96 HERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFD 155
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P++NV+SW M+ GYA++ + +EA
Sbjct: 156 RMPERNVVSWNAMVTGYAKNMRLDEA 181
Score = 56.6 bits (135), Expect = 3e-06
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMP----VKNLISWTSMIAGLLRNGRIDEARIL 169
R++V WN ++ + A HG EA + F+ M N +S+ +++ G +DE
Sbjct: 326 RDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGLNY 385
Query: 170 FERMPERNAVSWNMMITGYMQNM-----RFTEAFDLFKRMPEKDTSS-WNTMITGCIQNG 331
F+ + N++ + ++ R EA+D K++ K +SS W ++ GC +G
Sbjct: 386 FDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNAHG 445
Query: 332 DLR----TAKRLFNETPKKNVISWTTMINGYAQDNQGEEA 439
DL AK L E P +N ++ + N YA + EA
Sbjct: 446 DLEIGQLAAKELEKEDP-ENAGTYLLLSNIYASGRKWREA 484
>gb|EMJ05621.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
Length = 634
Score = 203 bits (517), Expect = 2e-50
Identities = 96/146 (65%), Positives = 115/146 (78%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NVVSWNT+LT+LA GRI+EA F+ MP +++ISWT+M+AG RNG IDEAR F+RM
Sbjct: 176 KNVVSWNTVLTALAHSGRIEEARTRFNLMPERDVISWTAMVAGFSRNGMIDEAREFFDRM 235
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P+RN VSWN MITGY QNMR EA +LF+RMP +D SWNTMITG IQNGDL+ A+ LF
Sbjct: 236 PKRNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTMITGFIQNGDLKRAQELFI 295
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P+KNVISWTTMI GY QD Q E+A
Sbjct: 296 RMPQKNVISWTTMITGYVQDGQNEKA 321
Score = 134 bits (337), Expect = 1e-29
Identities = 61/146 (41%), Positives = 93/146 (63%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
++V++W +++ + +++EA F +MPVKN++SW +MI G RN ++D A LFERM
Sbjct: 114 KDVITWTALVSGYIRLKQMKEAERLFYQMPVKNVVSWNTMIDGYARNCQVDMALELFERM 173
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PE+N VSWN ++T + R EA F MPE+D SW M+ G +NG + A+ F+
Sbjct: 174 PEKNVVSWNTVLTALAHSGRIEEARTRFNLMPERDVISWTAMVAGFSRNGMIDEAREFFD 233
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
PK+NV+SW MI GY Q+ + +EA
Sbjct: 234 RMPKRNVVSWNAMITGYTQNMRLDEA 259
Score = 134 bits (336), Expect = 2e-29
Identities = 60/147 (40%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPV-KNLISWTSMIAGLLRNGRIDEARILFER 178
++VV+W T++T + G ++EA FDR+ K++I+WT++++G +R ++ EA LF +
Sbjct: 82 KDVVTWTTVITGYIRCGMMEEARSLFDRVDAKKDVITWTALVSGYIRLKQMKEAERLFYQ 141
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP +N VSWN MI GY +N + A +LF+RMPEK+ SWNT++T +G + A+ F
Sbjct: 142 MPVKNVVSWNTMIDGYARNCQVDMALELFERMPEKNVVSWNTVLTALAHSGRIEEARTRF 201
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
N P+++VISWT M+ G++++ +EA
Sbjct: 202 NLMPERDVISWTAMVAGFSRNGMIDEA 228
Score = 128 bits (322), Expect = 7e-28
Identities = 59/121 (48%), Positives = 83/121 (68%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+V+SW ++ +++G I EA +FFDRMP +N++SW +MI G +N R+DEA LFERM
Sbjct: 207 RDVISWTAMVAGFSRNGMIDEAREFFDRMPKRNVVSWNAMITGYTQNMRLDEALELFERM 266
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P R+ SWN MITG++QN A +LF RMP+K+ SW TMITG +Q+G A F+
Sbjct: 267 PGRDMPSWNTMITGFIQNGDLKRAQELFIRMPQKNVISWTTMITGYVQDGQNEKALMFFS 326
Query: 362 E 364
+
Sbjct: 327 K 327
Score = 122 bits (306), Expect = 5e-26
Identities = 58/146 (39%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Frame = +2
Query: 5 NVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERMP 184
NV N ++T L+K G+ +EA FD MP K++++WT++I G +R G ++EAR LF+R+
Sbjct: 52 NVAQSNWLITRLSKDGKFREARQVFDGMPDKDVVTWTTVITGYIRCGMMEEARSLFDRVD 111
Query: 185 -ERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
+++ ++W +++GY++ + EA LF +MP K+ SWNTMI G +N + A LF
Sbjct: 112 AKKDVITWTALVSGYIRLKQMKEAERLFYQMPVKNVVSWNTMIDGYARNCQVDMALELFE 171
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P+KNV+SW T++ A + EEA
Sbjct: 172 RMPEKNVVSWNTVLTALAHSGRIEEA 197
Score = 97.1 bits (240), Expect = 2e-18
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN ++T ++ R+ EA + F+RMP +++ SW +MI G ++NG + A+ LF RM
Sbjct: 238 RNVVSWNAMITGYTQNMRLDEALELFERMPGRDMPSWNTMITGFIQNGDLKRAQELFIRM 297
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRM-------PEKDT----------------- 289
P++N +SW MITGY+Q+ + +A F +M P + T
Sbjct: 298 PQKNVISWTTMITGYVQDGQNEKALMFFSKMLVDNGVKPNQGTFVSVLSACSNLAGFSEG 357
Query: 290 SSWNTMITGCIQN----------------GDLRTAKRLFNE--TPKKNVISWTTMINGYA 415
+ MI+ + + G+L TA+++F++ T ++++SW MI YA
Sbjct: 358 QQIHQMISKTVHHECAFLVSALINMYSKCGELVTARKMFDDGLTIHRDMVSWNGMIAAYA 417
Query: 416 QDNQGEEA 439
G EA
Sbjct: 418 HHGCGIEA 425
>ref|XP_006340092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Solanum tuberosum]
Length = 641
Score = 199 bits (505), Expect = 4e-49
Identities = 92/146 (63%), Positives = 116/146 (79%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN ++ LA++GRI EA FD+MP KN++SWT+MIAGL RNGR+DEAR LF+R
Sbjct: 175 RNVVSWNMVIAGLARNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVDEARTLFDRT 234
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN MITGY QN + EAF+LF+ MPEK SSWNTMI G IQNG+L A+ LF+
Sbjct: 235 PERNVVSWNAMITGYTQNSKLDEAFELFEMMPEKIVSSWNTMIMGFIQNGELGRARILFD 294
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ +++V+SW+TMINGY Q+ + EEA
Sbjct: 295 KMRQRDVVSWSTMINGYMQEGRSEEA 320
Score = 151 bits (382), Expect = 8e-35
Identities = 73/146 (50%), Positives = 99/146 (67%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+VV+W +L + A+ RI EA F+ MP KN++SW S+I G RNGRID+ LF +M
Sbjct: 113 RDVVTWTAMLAAYARTNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKM 172
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
ERN VSWNM+I G +N R EA LF +MPEK+ SW TMI G +NG + A+ LF+
Sbjct: 173 RERNVVSWNMVIAGLARNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVDEARTLFD 232
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
TP++NV+SW MI GY Q+++ +EA
Sbjct: 233 RTPERNVVSWNAMITGYTQNSKLDEA 258
Score = 117 bits (292), Expect = 2e-24
Identities = 57/141 (40%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Frame = +2
Query: 20 NTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERMP-ERNA 196
N I++ L+K G++ EA FD+M +++SWT+MI+G +R G+ID+AR LF+R +R+
Sbjct: 56 NRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARELFDRTDAKRDV 115
Query: 197 VSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFNETPKK 376
V+W M+ Y + R EA LF MPEK+ SWN++I G +NG + LF + ++
Sbjct: 116 VTWTAMLAAYARTNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMRER 175
Query: 377 NVISWTTMINGYAQDNQGEEA 439
NV+SW +I G A++ + EA
Sbjct: 176 NVVSWNMVIAGLARNGRINEA 196
>ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cicer arietinum]
Length = 665
Score = 197 bits (501), Expect = 1e-48
Identities = 92/146 (63%), Positives = 114/146 (78%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNTI+T+LA GRI +A F +M ++++SWT+M+AGL +NGRID+AR LF+RM
Sbjct: 172 RNVVSWNTIITALAHSGRIDDAQGIFSKMQERDVVSWTTMVAGLSKNGRIDDARELFDRM 231
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P RN VSWN MITGY QN R EA LF+RMPE+D SWNTMITG IQNGDL A++LF+
Sbjct: 232 PVRNVVSWNAMITGYAQNGRLDEALKLFERMPERDMPSWNTMITGFIQNGDLNRAEKLFD 291
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
E P+KNVI+WT+M+ GY Q EEA
Sbjct: 292 EMPQKNVITWTSMMTGYVQHGLSEEA 317
Score = 145 bits (365), Expect = 7e-33
Identities = 67/146 (45%), Positives = 93/146 (63%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NV+ W +++ K RI+EA F MPV+N++SW +MI G RNGR EA LF RM
Sbjct: 110 KNVIVWTAMVSGYVKLNRIEEAERLFYEMPVRNVVSWNTMIDGYARNGRTQEALDLFRRM 169
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN +IT + R +A +F +M E+D SW TM+ G +NG + A+ LF+
Sbjct: 170 PERNVVSWNTIITALAHSGRIDDAQGIFSKMQERDVVSWTTMVAGLSKNGRIDDARELFD 229
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P +NV+SW MI GYAQ+ + +EA
Sbjct: 230 RMPVRNVVSWNAMITGYAQNGRLDEA 255
Score = 139 bits (349), Expect = 5e-31
Identities = 64/132 (48%), Positives = 92/132 (69%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+VVSW T++ L+K+GRI +A + FDRMPV+N++SW +MI G +NGR+DEA LFERM
Sbjct: 203 RDVVSWTTMVAGLSKNGRIDDARELFDRMPVRNVVSWNAMITGYAQNGRLDEALKLFERM 262
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PER+ SWN MITG++QN A LF MP+K+ +W +M+TG +Q+G A ++FN
Sbjct: 263 PERDMPSWNTMITGFIQNGDLNRAEKLFDEMPQKNVITWTSMMTGYVQHGLSEEALKIFN 322
Query: 362 ETPKKNVISWTT 397
+ + + TT
Sbjct: 323 KMQANDGLKPTT 334
Score = 136 bits (342), Expect = 3e-30
Identities = 64/147 (43%), Positives = 99/147 (67%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPV-KNLISWTSMIAGLLRNGRIDEARILFER 178
R++ W T+++ K G I+EA FDR KN+I WT+M++G ++ RI+EA LF
Sbjct: 78 RDICLWTTMISGYIKCGMIKEARKLFDRSDAEKNVIVWTAMVSGYVKLNRIEEAERLFYE 137
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP RN VSWN MI GY +N R EA DLF+RMPE++ SWNT+IT +G + A+ +F
Sbjct: 138 MPVRNVVSWNTMIDGYARNGRTQEALDLFRRMPERNVVSWNTIITALAHSGRIDDAQGIF 197
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
++ +++V+SWTTM+ G +++ + ++A
Sbjct: 198 SKMQERDVVSWTTMVAGLSKNGRIDDA 224
Score = 117 bits (292), Expect = 2e-24
Identities = 58/141 (41%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = +2
Query: 20 NTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERMP-ERNA 196
N ++SL K G+I EA FD M +++ WT+MI+G ++ G I EAR LF+R E+N
Sbjct: 53 NFFISSLCKQGKIDEARKVFDEMSERDICLWTTMISGYIKCGMIKEARKLFDRSDAEKNV 112
Query: 197 VSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFNETPKK 376
+ W M++GY++ R EA LF MP ++ SWNTMI G +NG + A LF P++
Sbjct: 113 IVWTAMVSGYVKLNRIEEAERLFYEMPVRNVVSWNTMIDGYARNGRTQEALDLFRRMPER 172
Query: 377 NVISWTTMINGYAQDNQGEEA 439
NV+SW T+I A + ++A
Sbjct: 173 NVVSWNTIITALAHSGRIDDA 193
>ref|XP_004237347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Solanum lycopersicum]
Length = 624
Score = 193 bits (491), Expect = 2e-47
Identities = 91/146 (62%), Positives = 114/146 (78%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN ++ LA++GRI EA FD+MP KN++SWT+MIAGL RNGR++EAR LF+R
Sbjct: 175 RNVVSWNMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVEEARTLFDRT 234
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN MITGY QN R EAF+LF+ MPEK SSWNTMI G IQNG+L A+ LF+
Sbjct: 235 PERNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIVSSWNTMIMGFIQNGELGRARILFD 294
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ +++V+SW+TMINGY + EEA
Sbjct: 295 KMRQRDVVSWSTMINGYMLKGRSEEA 320
Score = 152 bits (385), Expect = 3e-35
Identities = 73/146 (50%), Positives = 99/146 (67%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+VV+W ++ + A+ RI EA F+ MP KN++SW S+I G RNGRID+ LF +M
Sbjct: 113 RDVVTWTAMVAAYARMNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKM 172
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
ERN VSWNM+I G QN R EA LF +MPEK+ SW TMI G +NG + A+ LF+
Sbjct: 173 GERNVVSWNMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVEEARTLFD 232
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
TP++NV+SW MI GY Q+++ +EA
Sbjct: 233 RTPERNVVSWNAMITGYTQNSRLDEA 258
Score = 119 bits (298), Expect = 4e-25
Identities = 64/172 (37%), Positives = 97/172 (56%), Gaps = 32/172 (18%)
Frame = +2
Query: 20 NTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERMP-ERNA 196
N I++ L+K G++ EA FD+M +++SWT+MI+G +R G+ID+AR LF+R +R+
Sbjct: 56 NRIISKLSKEGQVDEARKLFDKMSEPDVVSWTAMISGYIRCGKIDKARELFDRTDAKRDV 115
Query: 197 VSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTM----------------------- 307
V+W M+ Y + R EA LF MPEK+ SWN++
Sbjct: 116 VTWTAMVAAYARMNRILEAEMLFNEMPEKNVVSWNSLIDGYARNGRIDKGLELFWKMGER 175
Query: 308 --------ITGCIQNGDLRTAKRLFNETPKKNVISWTTMINGYAQDNQGEEA 439
I G QNG + A+ LF++ P+KNV+SWTTMI G +++ + EEA
Sbjct: 176 NVVSWNMVIAGLAQNGRINEARVLFDQMPEKNVVSWTTMIAGLSRNGRVEEA 227
Score = 97.4 bits (241), Expect = 2e-18
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN ++T ++ R+ EA + F+ MP K + SW +MI G ++NG + ARILF++M
Sbjct: 237 RNVVSWNAMITGYTQNSRLDEAFELFEIMPEKIVSSWNTMIMGFIQNGELGRARILFDKM 296
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMP---------------------------- 277
+R+ VSW+ MI GYM R EA F M
Sbjct: 297 RQRDVVSWSTMINGYMLKGRSEEALRNFCEMQMDVLVKPNEGTFVSVLGACSDLAGLSEG 356
Query: 278 -------EKDTSSWNTMITGCIQN-----GDLRTAKRLFNE--TPKKNVISWTTMINGYA 415
K T N ++ + N GD+ TA+++F++ ++++ISW MI Y
Sbjct: 357 MQIHQVINKTTYQMNEVVISALINMYSKCGDVATARKIFDDGLRGQRDLISWNVMIAAYT 416
Query: 416 QDNQGEEA 439
G +A
Sbjct: 417 HHGFGRDA 424
>ref|XP_006587960.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X2 [Glycine max]
gi|571479769|ref|XP_006587961.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X3 [Glycine max]
gi|571479771|ref|XP_003533693.2| PREDICTED:
pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like isoform X1 [Glycine max]
Length = 618
Score = 191 bits (485), Expect = 9e-47
Identities = 87/146 (59%), Positives = 113/146 (77%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNTI+T+L + GRI++A FD+M ++++SWT+M+AGL +NGR+++AR LF++M
Sbjct: 161 RNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQM 220
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P RN VSWN MITGY QN R EA LF+RMPE+D SWNTMITG IQNG+L A++LF
Sbjct: 221 PVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFG 280
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
E +KNVI+WT M+ GY Q EEA
Sbjct: 281 EMQEKNVITWTAMMTGYVQHGLSEEA 306
Score = 139 bits (351), Expect = 3e-31
Identities = 63/146 (43%), Positives = 94/146 (64%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NVV+W ++ K +++EA F MP++N++SW +M+ G RNG +A LF RM
Sbjct: 99 KNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRM 158
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN +IT +Q R +A LF +M ++D SW TM+ G +NG + A+ LF+
Sbjct: 159 PERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAKNGRVEDARALFD 218
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ P +NV+SW MI GYAQ+ + +EA
Sbjct: 219 QMPVRNVVSWNAMITGYAQNRRLDEA 244
Score = 137 bits (346), Expect = 1e-30
Identities = 64/147 (43%), Positives = 98/147 (66%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPV-KNLISWTSMIAGLLRNGRIDEARILFER 178
R++ W T++T K G I+EA FDR KN+++WT+M+ G ++ ++ EA LF
Sbjct: 67 RDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKEAERLFYE 126
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP RN VSWN M+ GY +N +A DLF+RMPE++ SWNT+IT +Q G + A+RLF
Sbjct: 127 MPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDAQRLF 186
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
++ ++V+SWTTM+ G A++ + E+A
Sbjct: 187 DQMKDRDVVSWTTMVAGLAKNGRVEDA 213
Score = 128 bits (321), Expect = 9e-28
Identities = 59/119 (49%), Positives = 83/119 (69%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+VVSW T++ LAK+GR+++A FD+MPV+N++SW +MI G +N R+DEA LF+RM
Sbjct: 192 RDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRM 251
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
PER+ SWN MITG++QN A LF M EK+ +W M+TG +Q+G A R+F
Sbjct: 252 PERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVF 310
Score = 107 bits (268), Expect = 1e-21
Identities = 55/141 (39%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
Frame = +2
Query: 20 NTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERMP-ERNA 196
N ++ L + G I A F+ MP +++ WT+MI G L+ G I EAR LF+R ++N
Sbjct: 42 NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNV 101
Query: 197 VSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFNETPKK 376
V+W M+ GY++ + EA LF MP ++ SWNTM+ G +NG + A LF P++
Sbjct: 102 VTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPER 161
Query: 377 NVISWTTMINGYAQDNQGEEA 439
NV+SW T+I Q + E+A
Sbjct: 162 NVVSWNTIITALVQCGRIEDA 182
Score = 98.2 bits (243), Expect = 1e-18
Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN ++T A++ R+ EA F RMP +++ SW +MI G ++NG ++ A LF M
Sbjct: 223 RNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEM 282
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRM-----PEKDTSSWNTMITGC--------- 319
E+N ++W M+TGY+Q+ EA +F +M + +T ++ T++ C
Sbjct: 283 QEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEG 342
Query: 320 --------------------------IQNGDLRTAKRLFNE--TPKKNVISWTTMINGYA 415
+ G+L TA+++F++ ++++ISW MI YA
Sbjct: 343 QQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYA 402
Query: 416 QDNQGEEA 439
G+EA
Sbjct: 403 HHGYGKEA 410
>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 189 bits (480), Expect = 3e-46
Identities = 85/146 (58%), Positives = 113/146 (77%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNT++T+ + R+ EA + F+RMP +++ISWT+M+AGL +NGRID+AR+LF++M
Sbjct: 189 RNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKM 248
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P RN VSWN MI GY QNMR EAF LF++MPE++ SSWNTMITG IQNG L A F
Sbjct: 249 PVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFY 308
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ KNV++WT +I+G+ QD + EEA
Sbjct: 309 KMSNKNVVTWTAVISGHVQDGRSEEA 334
Score = 161 bits (407), Expect = 1e-37
Identities = 76/146 (52%), Positives = 101/146 (69%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NVV+W +++ + RI+EA FD MPVKN+ISW +MI G R G ID+A LFE M
Sbjct: 127 KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXM 186
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN +IT +MQ R EA +LF RMPE+D SW TM+ G +NG + A+ LF+
Sbjct: 187 PERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFD 246
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ P +NV+SW TMI GYAQ+ + +EA
Sbjct: 247 KMPVRNVVSWNTMIIGYAQNMRLDEA 272
Score = 140 bits (354), Expect = 1e-31
Identities = 65/147 (44%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMP-VKNLISWTSMIAGLLRNGRIDEARILFER 178
R+VVSW ++T K G I+EA FDR +KN+++WT++++G +R RI+EAR LF+
Sbjct: 95 RDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDA 154
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP +N +SWN MI GY + +A DLF+ MPE++ SWNT+IT +Q + A+ LF
Sbjct: 155 MPVKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELF 214
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
N P+++VISWTTM+ G +++ + ++A
Sbjct: 215 NRMPERDVISWTTMVAGLSKNGRIDDA 241
Score = 125 bits (315), Expect = 4e-27
Identities = 57/126 (45%), Positives = 85/126 (67%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+V+SW T++ L+K+GRI +A FD+MPV+N++SW +MI G +N R+DEA LFE+M
Sbjct: 220 RDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQM 279
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PER SWN MITG++QN + A D F +M K+ +W +I+G +Q+G A ++F+
Sbjct: 280 PERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFS 339
Query: 362 ETPKKN 379
E N
Sbjct: 340 EMQAAN 345
Score = 72.0 bits (175), Expect = 8e-11
Identities = 44/157 (28%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R + SWNT++T ++G+++ A DFF +M KN+++WT++I+G +++GR +EA +F M
Sbjct: 282 RELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEM 341
Query: 182 PERNAVSWN----MMITGYMQNM-RFTEAFDLF----KRMPEKDTSSWNTMITGCIQNGD 334
N V N + + G + E + K + ++ + +I + G+
Sbjct: 342 QAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGE 401
Query: 335 LRTAKRLFNE--TPKKNVISWTTMINGYAQDNQGEEA 439
L A+++F++ ++V+SW MI YA G +A
Sbjct: 402 LELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKA 438
Score = 59.3 bits (142), Expect = 5e-07
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNL----ISWTSMIAGLLRNGRIDEARIL 169
R+VVSWN ++ + A HG +A FD M +++ ++++ G +DE L
Sbjct: 417 RDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKL 476
Query: 170 FERMPERNAVS-----WNMMITGYMQNMRFTEAFDLFKRMPEKDTSS-WNTMITGCIQNG 331
FE + ++ + ++ + + R EAFD K + K ++S W ++ GC +G
Sbjct: 477 FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHG 536
Query: 332 DL----RTAKRLFNETPKKNVISWTTMINGYAQDNQGEEA 439
+ TA++L ET +N ++ + N YA + EA
Sbjct: 537 HIDLGKLTAEKLL-ETEPENAGTYLVLSNIYASTGKWREA 575
>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 189 bits (480), Expect = 3e-46
Identities = 85/146 (58%), Positives = 113/146 (77%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNT++T+ + R+ EA + F+RMP +++ISWT+M+AGL +NGRID+AR+LF++M
Sbjct: 189 RNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKM 248
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P RN VSWN MI GY QNMR EAF LF++MPE++ SSWNTMITG IQNG L A F
Sbjct: 249 PVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFY 308
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ KNV++WT +I+G+ QD + EEA
Sbjct: 309 KMSNKNVVTWTAVISGHVQDGRSEEA 334
Score = 162 bits (410), Expect = 4e-38
Identities = 76/146 (52%), Positives = 102/146 (69%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NVV+W +++ + RI+EA FD MPVKN+ISW +MI G R G ID+A LFE+M
Sbjct: 127 KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKM 186
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN +IT +MQ R EA +LF RMPE+D SW TM+ G +NG + A+ LF+
Sbjct: 187 PERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFD 246
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ P +NV+SW TMI GYAQ+ + +EA
Sbjct: 247 KMPVRNVVSWNTMIIGYAQNMRLDEA 272
Score = 142 bits (357), Expect = 6e-32
Identities = 65/147 (44%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMP-VKNLISWTSMIAGLLRNGRIDEARILFER 178
R+VVSW ++T K G I+EA FDR +KN+++WT++++G +R RI+EAR LF+
Sbjct: 95 RDVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDA 154
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP +N +SWN MI GY + +A DLF++MPE++ SWNT+IT +Q + A+ LF
Sbjct: 155 MPVKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELF 214
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
N P+++VISWTTM+ G +++ + ++A
Sbjct: 215 NRMPERDVISWTTMVAGLSKNGRIDDA 241
Score = 125 bits (315), Expect = 4e-27
Identities = 57/126 (45%), Positives = 85/126 (67%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+V+SW T++ L+K+GRI +A FD+MPV+N++SW +MI G +N R+DEA LFE+M
Sbjct: 220 RDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQM 279
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PER SWN MITG++QN + A D F +M K+ +W +I+G +Q+G A ++F+
Sbjct: 280 PERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFS 339
Query: 362 ETPKKN 379
E N
Sbjct: 340 EMQAAN 345
Score = 72.0 bits (175), Expect = 8e-11
Identities = 44/157 (28%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R + SWNT++T ++G+++ A DFF +M KN+++WT++I+G +++GR +EA +F M
Sbjct: 282 RELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEM 341
Query: 182 PERNAVSWN----MMITGYMQNM-RFTEAFDLF----KRMPEKDTSSWNTMITGCIQNGD 334
N V N + + G + E + K + ++ + +I + G+
Sbjct: 342 QAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGE 401
Query: 335 LRTAKRLFNE--TPKKNVISWTTMINGYAQDNQGEEA 439
L A+++F++ ++V+SW MI YA G +A
Sbjct: 402 LELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKA 438
Score = 59.3 bits (142), Expect = 5e-07
Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNL----ISWTSMIAGLLRNGRIDEARIL 169
R+VVSWN ++ + A HG +A FD M +++ ++++ G +DE L
Sbjct: 417 RDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKL 476
Query: 170 FERMPERNAVS-----WNMMITGYMQNMRFTEAFDLFKRMPEKDTSS-WNTMITGCIQNG 331
FE + ++ + ++ + + R EAFD K + K ++S W ++ GC +G
Sbjct: 477 FENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHG 536
Query: 332 DL----RTAKRLFNETPKKNVISWTTMINGYAQDNQGEEA 439
+ TA++L ET +N ++ + N YA + EA
Sbjct: 537 HIDLGKLTAEKLL-ETEPENAGTYLVLSNIYASTGKWREA 575
>ref|XP_002529164.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531388|gb|EEF33223.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 453
Score = 188 bits (477), Expect = 7e-46
Identities = 87/152 (57%), Positives = 114/152 (75%), Gaps = 6/152 (3%)
Frame = +2
Query: 2 RNVVSWNTI------LTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEAR 163
+NVV+W + L + + R+ EA FD MP +++ISWT+M+AGL RNGRIDEAR
Sbjct: 116 KNVVTWTAMVSGYMRLNQVLEAERVDEARRLFDEMPKRDVISWTAMVAGLARNGRIDEAR 175
Query: 164 ILFERMPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRT 343
+F++MPERN VSWN MITGY +NMR EAF+LF+RMPE+D SWNTMITG IQN +L+
Sbjct: 176 KIFDKMPERNVVSWNAMITGYAKNMRLVEAFELFERMPERDLPSWNTMITGFIQNKELKL 235
Query: 344 AKRLFNETPKKNVISWTTMINGYAQDNQGEEA 439
A++L +E P+KNV+SWTTMI GY Q+ + E A
Sbjct: 236 ARKLLDEMPEKNVVSWTTMITGYVQEGESEAA 267
Score = 127 bits (320), Expect = 1e-27
Identities = 60/121 (49%), Positives = 80/121 (66%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+V+SW ++ LA++GRI EA FD+MP +N++SW +MI G +N R+ EA LFERM
Sbjct: 153 RDVISWTAMVAGLARNGRIDEARKIFDKMPERNVVSWNAMITGYAKNMRLVEAFELFERM 212
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PER+ SWN MITG++QN A L MPEK+ SW TMITG +Q G+ A +F
Sbjct: 213 PERDLPSWNTMITGFIQNKELKLARKLLDEMPEKNVVSWTTMITGYVQEGESEAALNIFM 272
Query: 362 E 364
E
Sbjct: 273 E 273
Score = 97.4 bits (241), Expect = 2e-18
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 45/191 (23%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN ++T AK+ R+ EA + F+RMP ++L SW +MI G ++N + AR L + M
Sbjct: 184 RNVVSWNAMITGYAKNMRLVEAFELFERMPERDLPSWNTMITGFIQNKELKLARKLLDEM 243
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKR-------MPEKDT----------------- 289
PE+N VSW MITGY+Q A ++F MP + T
Sbjct: 244 PEKNVVSWTTMITGYVQEGESEAALNIFMEMIRDGGVMPNEGTFVNVLGACSDLAGLGEG 303
Query: 290 -------------------SSWNTMITGCIQNGDLRTAKRLFNE--TPKKNVISWTTMIN 406
S+ M + C G+L A+++F+ T +++++SW M+
Sbjct: 304 QQVHQMISKTVYQDMPFVVSALINMYSKC---GELDMARKMFDNRTTSQRDLVSWNCMVA 360
Query: 407 GYAQDNQGEEA 439
YA G+EA
Sbjct: 361 AYAHHGCGKEA 371
>ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 891
Score = 187 bits (476), Expect = 1e-45
Identities = 86/146 (58%), Positives = 111/146 (76%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNT++T+LA GRI +A F+ M ++++SWT+M+AGL +NGR+D AR +F++M
Sbjct: 168 RNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKM 227
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P RN VSWN MI GY QN RF EA LF+RMPE+D SWNTM+TG IQNGDL A++LF+
Sbjct: 228 PIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFH 287
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P+KNVI+WT M+ GY Q EEA
Sbjct: 288 AMPQKNVITWTAMMTGYVQHGLSEEA 313
Score = 139 bits (349), Expect = 5e-31
Identities = 65/146 (44%), Positives = 93/146 (63%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
++V+ W +++ K RI+EA F+ MPV+N++SW +MI G RNGR EA LF RM
Sbjct: 106 KSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRM 165
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN ++T R +A LF M E+D SW TM+ G +NG + A+ +F+
Sbjct: 166 PERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFD 225
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ P +NV+SW MI GYAQ+ + +EA
Sbjct: 226 KMPIRNVVSWNAMIAGYAQNGRFDEA 251
Score = 136 bits (342), Expect = 3e-30
Identities = 62/132 (46%), Positives = 90/132 (68%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+VVSW T++ L+K+GR+ A + FD+MP++N++SW +MIAG +NGR DEA LFERM
Sbjct: 199 RDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERM 258
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PER+ SWN M+TG++QN A LF MP+K+ +W M+TG +Q+G A +LFN
Sbjct: 259 PERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFN 318
Query: 362 ETPKKNVISWTT 397
+ + + TT
Sbjct: 319 KMQANDGLKPTT 330
Score = 134 bits (337), Expect = 1e-29
Identities = 66/147 (44%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPV-KNLISWTSMIAGLLRNGRIDEARILFER 178
R+ W T+++ K G I EA FDR K++I WT+M++G ++ RI+EA LF
Sbjct: 74 RDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEAERLFNE 133
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP RN VSWN MI GY +N R EA DLF RMPE++ SWNT++T G + A+RLF
Sbjct: 134 MPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLF 193
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
NE +++V+SWTTM+ G +++ + + A
Sbjct: 194 NEMRERDVVSWTTMVAGLSKNGRVDAA 220
Score = 108 bits (269), Expect = 1e-21
Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
Frame = +2
Query: 20 NTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERMP-ERNA 196
N ++ L + G++ EA FD M ++ WT+MI+G ++ G I+EAR LF+R +++
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108
Query: 197 VSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFNETPKK 376
+ W M++GY++ R EA LF MP ++ SWNTMI G +NG + A LF P++
Sbjct: 109 IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPER 168
Query: 377 NVISWTTMINGYAQDNQGEEA 439
NV+SW T++ A + ++A
Sbjct: 169 NVVSWNTVMTALAHCGRIDDA 189
>gb|ESW33429.1| hypothetical protein PHAVU_001G068400g [Phaseolus vulgaris]
Length = 616
Score = 186 bits (471), Expect = 4e-45
Identities = 83/146 (56%), Positives = 113/146 (77%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWNTI+T+L + G++ +A FD+M ++++SWT+M+AGL +NGR+++AR LF++M
Sbjct: 158 RNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMVAGLSKNGRVEDARALFDQM 217
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
P RN VSWN+M+TGY QN R EA +LF+RMPE++ SWNTMITG IQNG+L A++LF
Sbjct: 218 PVRNVVSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTMITGFIQNGELNHAEKLFR 277
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
E KNVI+WT M+ GY Q EEA
Sbjct: 278 EMRVKNVITWTAMMTGYVQHGLSEEA 303
Score = 137 bits (344), Expect = 2e-30
Identities = 64/147 (43%), Positives = 99/147 (67%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPV-KNLISWTSMIAGLLRNGRIDEARILFER 178
R++ W T++ K G I+EA FDR+ KN+++WT+MI G +R ++ EA LF
Sbjct: 64 RDIGLWTTMINGYLKCGMIREARKLFDRLDAKKNVVTWTAMIKGYIRLNQVKEAERLFYE 123
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MP RN VSWN M+ GY +N +A DLF+RMPE++ SWNT+IT +Q G + A+RLF
Sbjct: 124 MPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITTLVQCGKVDDAQRLF 183
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
++ +++V+SWTTM+ G +++ + E+A
Sbjct: 184 DQMKERDVVSWTTMVAGLSKNGRVEDA 210
Score = 135 bits (339), Expect = 7e-30
Identities = 61/146 (41%), Positives = 93/146 (63%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NVV+W ++ + +++EA F MP++N++SW +M+ G RNG +A LF RM
Sbjct: 96 KNVVTWTAMIKGYIRLNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRM 155
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN +IT +Q + +A LF +M E+D SW TM+ G +NG + A+ LF+
Sbjct: 156 PERNVVSWNTIITTLVQCGKVDDAQRLFDQMKERDVVSWTTMVAGLSKNGRVEDARALFD 215
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
+ P +NV+SW M+ GYAQ+ + EA
Sbjct: 216 QMPVRNVVSWNVMVTGYAQNGRLNEA 241
Score = 128 bits (322), Expect = 7e-28
Identities = 57/121 (47%), Positives = 85/121 (70%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+VVSW T++ L+K+GR+++A FD+MPV+N++SW M+ G +NGR++EA LF+RM
Sbjct: 189 RDVVSWTTMVAGLSKNGRVEDARALFDQMPVRNVVSWNVMVTGYAQNGRLNEALELFQRM 248
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN SWN MITG++QN A LF+ M K+ +W M+TG +Q+G A ++FN
Sbjct: 249 PERNMPSWNTMITGFIQNGELNHAEKLFREMRVKNVITWTAMMTGYVQHGLSEEAVKVFN 308
Query: 362 E 364
+
Sbjct: 309 K 309
Score = 105 bits (263), Expect = 5e-21
Identities = 55/141 (39%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = +2
Query: 20 NTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERMP-ERNA 196
N ++ L + G+I +A FD+M +++ WT+MI G L+ G I EAR LF+R+ ++N
Sbjct: 39 NLLIFRLCEDGKIDDARKVFDKMLDRDIGLWTTMINGYLKCGMIREARKLFDRLDAKKNV 98
Query: 197 VSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFNETPKK 376
V+W MI GY++ + EA LF MP ++ SWNTM+ G +NG + A LF P++
Sbjct: 99 VTWTAMIKGYIRLNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPER 158
Query: 377 NVISWTTMINGYAQDNQGEEA 439
NV+SW T+I Q + ++A
Sbjct: 159 NVVSWNTIITTLVQCGKVDDA 179
Score = 102 bits (255), Expect = 4e-20
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN ++T A++GR+ EA + F RMP +N+ SW +MI G ++NG ++ A LF M
Sbjct: 220 RNVVSWNVMVTGYAQNGRLNEALELFQRMPERNMPSWNTMITGFIQNGELNHAEKLFREM 279
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKD-----TSSWNTMITGC--------- 319
+N ++W M+TGY+Q+ EA +F +M D T ++ T++ C
Sbjct: 280 RVKNVITWTAMMTGYVQHGLSEEAVKVFNKMLAADGLKPNTGTFVTVLGACSDLAGLTEG 339
Query: 320 --------------------------IQNGDLRTAKRLFNE--TPKKNVISWTTMINGYA 415
+ G+LR A+++F++ ++++ISW MI YA
Sbjct: 340 QQIHQMISKTIFQDSTYVVSALINMYSKCGELRIARKMFDDGLLRQRDLISWNGMIAAYA 399
Query: 416 QDNQGEEA 439
G+EA
Sbjct: 400 HHGYGKEA 407
>ref|XP_006410659.1| hypothetical protein EUTSA_v10016379mg [Eutrema salsugineum]
gi|557111828|gb|ESQ52112.1| hypothetical protein
EUTSA_v10016379mg [Eutrema salsugineum]
Length = 626
Score = 186 bits (471), Expect = 4e-45
Identities = 85/146 (58%), Positives = 114/146 (78%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RN VSWNT++ +LA+ GRIQEA + F+RMP +++ISWT+M+ GL +NG++DEAR +F+ M
Sbjct: 168 RNTVSWNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVDGLGKNGKVDEARRVFDCM 227
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN +SWN MITGY N R EA LF+ MPE++ +SWNTMITG I+NG++ A LF+
Sbjct: 228 PERNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGFIRNGEINRACGLFD 287
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P+KNVISWTTMI GY Q+ + E+A
Sbjct: 288 RMPQKNVISWTTMITGYVQNKENEDA 313
Score = 136 bits (343), Expect = 3e-30
Identities = 63/147 (42%), Positives = 95/147 (64%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPV-KNLISWTSMIAGLLRNGRIDEARILFER 178
R+ +W ++T K G ++EA + FDR KN+++WT+M++G LR + A +LF+
Sbjct: 74 RDEYTWTDVITGYIKLGNMREARELFDRADARKNVVTWTAMVSGYLRAKQFSAAEMLFQE 133
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MPERN VSWN MI GY Q+ R +A +LF MPE++T SWNT+I Q G ++ A LF
Sbjct: 134 MPERNEVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTLIKALAQLGRIQEAMNLF 193
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
P ++VISWT M++G ++ + +EA
Sbjct: 194 ERMPTRDVISWTAMVDGLGKNGKVDEA 220
Score = 135 bits (341), Expect = 4e-30
Identities = 64/146 (43%), Positives = 92/146 (63%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NVV+W +++ + + A F MP +N +SW +MI G ++GRID+A LF+ M
Sbjct: 106 KNVVTWTAMVSGYLRAKQFSAAEMLFQEMPERNEVSWNTMIDGYAQSGRIDKALELFDEM 165
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN +I Q R EA +LF+RMP +D SW M+ G +NG + A+R+F+
Sbjct: 166 PERNTVSWNTLIKALAQLGRIQEAMNLFERMPTRDVISWTAMVDGLGKNGKVDEARRVFD 225
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P++N ISW MI GYA +N+ EEA
Sbjct: 226 CMPERNTISWNAMITGYAHNNRIEEA 251
Score = 108 bits (271), Expect = 6e-22
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RN +SWN ++T A + RI+EA+ F MP +N SW +MI G +RNG I+ A LF+RM
Sbjct: 230 RNTISWNAMITGYAHNNRIEEADQLFQVMPERNFASWNTMITGFIRNGEINRACGLFDRM 289
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRM----------------------------- 274
P++N +SW MITGY+QN +A +F M
Sbjct: 290 PQKNVISWTTMITGYVQNKENEDALKVFSNMLRDGCVKPNEGTYVSILSACSDMAGLVEG 349
Query: 275 ------PEKDTSSWNTMITGCIQN-----GDLRTAKRLFNE--TPKKNVISWTTMINGYA 415
K N ++T I N G+L A+++F+ ++++ISW +MI YA
Sbjct: 350 QQIHQLISKSVHQRNELVTSAIINMYSKCGELIAARKIFDAGLVSQRDLISWNSMIAVYA 409
Query: 416 QDNQGEEA 439
+G+EA
Sbjct: 410 HHGRGKEA 417
>gb|EMT01545.1| hypothetical protein F775_52571 [Aegilops tauschii]
Length = 911
Score = 186 bits (471), Expect = 4e-45
Identities = 84/146 (57%), Positives = 111/146 (76%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+ SWN +L +L + G + EA + F+RMP +N++SWT+M+AGL R+G +DEAR LF+ M
Sbjct: 144 RDAGSWNILLAALVRSGTMDEARNLFERMPERNVMSWTTMVAGLARSGSVDEARGLFDGM 203
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN MI+GY +N+R EA DLF MPE+D +SWN MITG IQN DL+ A+ LF+
Sbjct: 204 PERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFD 263
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
E PK+NV+SWTTM+NG Q N+ E A
Sbjct: 264 EMPKRNVVSWTTMMNGCLQGNESEMA 289
Score = 129 bits (325), Expect = 3e-28
Identities = 58/120 (48%), Positives = 82/120 (68%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNV+SW T++ LA+ G + EA FD MP +N++SW +MI+G RN RIDEA LF M
Sbjct: 175 RNVMSWTTMVAGLARSGSVDEARGLFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNM 234
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PER+ SWN+MITG++QN +A +LF MP+++ SW TM+ GC+Q + A ++FN
Sbjct: 235 PERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFN 294
Score = 114 bits (285), Expect = 1e-23
Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 32/162 (19%)
Frame = +2
Query: 50 GRIQEANDFFDRMPVKNLISWTSMIAGLLRNG---------------------------- 145
GR+ +A FDR P ++++SWT+M+A R G
Sbjct: 35 GRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALFHRPDARRNVVTWTALLSGY 94
Query: 146 ----RIDEARILFERMPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMIT 313
R DEAR LF+RMPERN VSWN M+ Y R A LF MP +D SWN ++
Sbjct: 95 ARARRADEARALFDRMPERNVVSWNTMLEAYASAGRTGAACALFDSMPVRDAGSWNILLA 154
Query: 314 GCIQNGDLRTAKRLFNETPKKNVISWTTMINGYAQDNQGEEA 439
+++G + A+ LF P++NV+SWTTM+ G A+ +EA
Sbjct: 155 ALVRSGTMDEARNLFERMPERNVMSWTTMVAGLARSGSVDEA 196
Score = 91.3 bits (225), Expect = 1e-16
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 39/185 (21%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN +++ A++ RI EA D F MP +++ SW MI G ++N + +A+ LF+ M
Sbjct: 206 RNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEM 265
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFK------------------------------- 268
P+RN VSW M+ G +Q A +F
Sbjct: 266 PKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDACSNLAGLSEGQ 325
Query: 269 ---RMPEKDTSSWNTMITGCIQN-----GDLRTAKRLFNETPKKNVISWTTMINGYAQDN 424
+M K ++ I + N G++R A+++F+ + +K+VISW +I YA
Sbjct: 326 QVHQMICKTPFQFDNFIESTLMNLYAKCGEIRLARKVFDLSGEKDVISWNGIIAAYAHHG 385
Query: 425 QGEEA 439
G EA
Sbjct: 386 AGVEA 390
>ref|XP_002881370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297327209|gb|EFH57629.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 627
Score = 184 bits (466), Expect = 1e-44
Identities = 84/146 (57%), Positives = 111/146 (76%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RN VSWNT++ +L + GRI EA + F+RMP+K++ISWT+M+ GL +NG++DEAR LF+ M
Sbjct: 169 RNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN +SWN MITGY N R EA LF+ MPE+D +SWNTMITG I+N ++ A LF+
Sbjct: 229 PERNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGLFD 288
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P+KNVISWT MI GY ++ + EEA
Sbjct: 289 RMPQKNVISWTAMITGYVENKENEEA 314
Score = 146 bits (368), Expect = 3e-33
Identities = 68/147 (46%), Positives = 100/147 (68%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPV-KNLISWTSMIAGLLRNGRIDEARILFER 178
R+VV+W ++T K G ++EA + FDR+ KN+++WT+M++G LR+ ++ A LF+
Sbjct: 75 RDVVTWTDVITGYIKLGNMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSVAETLFQE 134
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MPERN VSWN MI GY Q+ R +A +LF MPE++T SWNTMI +Q G + A LF
Sbjct: 135 MPERNIVSWNTMIDGYAQSGRIDKALELFDEMPERNTVSWNTMIKALVQRGRIDEAMNLF 194
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
P K+VISWT M++G A++ + +EA
Sbjct: 195 ERMPIKDVISWTAMVDGLAKNGKVDEA 221
Score = 143 bits (360), Expect = 3e-32
Identities = 65/146 (44%), Positives = 95/146 (65%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NVV+W +++ + ++ A F MP +N++SW +MI G ++GRID+A LF+ M
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSVAETLFQEMPERNIVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN MI +Q R EA +LF+RMP KD SW M+ G +NG + A+RLF+
Sbjct: 167 PERNTVSWNTMIKALVQRGRIDEAMNLFERMPIKDVISWTAMVDGLAKNGKVDEARRLFD 226
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P++N+ISW MI GY +N+ +EA
Sbjct: 227 CMPERNIISWNAMITGYTYNNRIDEA 252
Score = 101 bits (251), Expect = 1e-19
Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RN++SWN ++T + RI EA+ F MP ++ SW +MI G +RN I+ A LF+RM
Sbjct: 231 RNIISWNAMITGYTYNNRIDEADQLFQVMPERDFASWNTMITGFIRNREINRACGLFDRM 290
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRM----------------------------- 274
P++N +SW MITGY++N EA +F +M
Sbjct: 291 PQKNVISWTAMITGYVENKENEEALKVFSKMLRDGCVKPNVGTYVSILSACSDLAGLVEG 350
Query: 275 ------PEKDTSSWNTMITGCIQN-----GDLRTAKRLFNE--TPKKNVISWTTMINGYA 415
K N ++T + N G+L A+++F+ ++++ISW +MI YA
Sbjct: 351 QQIHQLISKSVHQENEVVTSALINMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 416 QDNQGEEA 439
G+EA
Sbjct: 411 HHGHGKEA 418
>dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 183 bits (465), Expect = 2e-44
Identities = 84/146 (57%), Positives = 109/146 (74%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+ SWN +L +L + G + EA F+RMP +N++SWT+MI+GL R+G DEAR LF+ M
Sbjct: 162 RDAGSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGM 221
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN MI+GY +N+R EA DLF MPE+D +SWN MITG IQN DL+ A+ LF+
Sbjct: 222 PERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFD 281
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
E PK+NV+SWTTM+NG Q N+ E A
Sbjct: 282 EMPKRNVVSWTTMMNGCLQGNESEMA 307
Score = 128 bits (322), Expect = 7e-28
Identities = 58/120 (48%), Positives = 82/120 (68%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNV+SW T+++ LA+ G EA FD MP +N++SW +MI+G RN RIDEA LF M
Sbjct: 193 RNVMSWTTMISGLARSGSADEARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNM 252
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PER+ SWN+MITG++QN +A +LF MP+++ SW TM+ GC+Q + A ++FN
Sbjct: 253 PERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFN 312
Score = 124 bits (311), Expect = 1e-26
Identities = 64/172 (37%), Positives = 90/172 (52%), Gaps = 32/172 (18%)
Frame = +2
Query: 20 NTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNG------------------ 145
N + LA GR+ +A FDR P ++++SWT+M+A R G
Sbjct: 43 NRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHRPDARRNV 102
Query: 146 --------------RIDEARILFERMPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEK 283
R+DEAR LF+RMPERN VSWN M+ Y R A LF MP +
Sbjct: 103 VTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVR 162
Query: 284 DTSSWNTMITGCIQNGDLRTAKRLFNETPKKNVISWTTMINGYAQDNQGEEA 439
D SWN ++ +++G + A+RLF P++NV+SWTTMI+G A+ +EA
Sbjct: 163 DAGSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEA 214
Score = 90.9 bits (224), Expect = 2e-16
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RNVVSWN +++ A++ RI EA D F MP +++ SW MI G ++N + +A+ LF+ M
Sbjct: 224 RNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFDEM 283
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRM------PEKDT------------------ 289
P+RN VSW M+ G +Q A +F M P + T
Sbjct: 284 PKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQ 343
Query: 290 ------------------SSWNTMITGCIQNGDLRTAKRLFNETPKKNVISWTTMINGYA 415
SS + C G++R A+++F+ + +K+VISW MI YA
Sbjct: 344 QVHQMICKTPFQFDNFIESSLMKLYAKC---GEIRLARKVFDLSGEKDVISWNGMIAAYA 400
Query: 416 QDNQGEEA 439
G EA
Sbjct: 401 HHGAGVEA 408
>ref|NP_181048.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099187|sp|O64766.1|PP185_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g35030, mitochondrial; Flags: Precursor
gi|3033399|gb|AAC12843.1| hypothetical protein
[Arabidopsis thaliana] gi|209414526|gb|ACI46503.1|
At2g35030 [Arabidopsis thaliana]
gi|330253957|gb|AEC09051.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 183 bits (465), Expect = 2e-44
Identities = 83/146 (56%), Positives = 113/146 (77%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RN+VSWN+++ +L + GRI EA + F+RMP ++++SWT+M+ GL +NG++DEAR LF+ M
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN +SWN MITGY QN R EA LF+ MPE+D +SWNTMITG I+N ++ A LF+
Sbjct: 229 PERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P+KNVISWTTMI GY ++ + EEA
Sbjct: 289 RMPEKNVISWTTMITGYVENKENEEA 314
Score = 144 bits (364), Expect = 9e-33
Identities = 65/146 (44%), Positives = 97/146 (66%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
+NVV+W +++ + ++ A F MP +N++SW +MI G ++GRID+A LF+ M
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PERN VSWN M+ +Q R EA +LF+RMP +D SW M+ G +NG + A+RLF+
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 362 ETPKKNVISWTTMINGYAQDNQGEEA 439
P++N+ISW MI GYAQ+N+ +EA
Sbjct: 227 CMPERNIISWNAMITGYAQNNRIDEA 252
Score = 142 bits (357), Expect = 6e-32
Identities = 63/147 (42%), Positives = 101/147 (68%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPV-KNLISWTSMIAGLLRNGRIDEARILFER 178
R+VV+W ++T K G ++EA + FDR+ KN+++WT+M++G LR+ ++ A +LF+
Sbjct: 75 RDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQE 134
Query: 179 MPERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLF 358
MPERN VSWN MI GY Q+ R +A +LF MPE++ SWN+M+ +Q G + A LF
Sbjct: 135 MPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLF 194
Query: 359 NETPKKNVISWTTMINGYAQDNQGEEA 439
P+++V+SWT M++G A++ + +EA
Sbjct: 195 ERMPRRDVVSWTAMVDGLAKNGKVDEA 221
Score = 129 bits (324), Expect = 4e-28
Identities = 63/140 (45%), Positives = 93/140 (66%), Gaps = 5/140 (3%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
R+VVSW ++ LAK+G++ EA FD MP +N+ISW +MI G +N RIDEA LF+ M
Sbjct: 200 RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPEKDTSSWNTMITGCIQNGDLRTAKRLFN 361
PER+ SWN MITG+++N +A LF RMPEK+ SW TMITG ++N + A +F+
Sbjct: 260 PERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFS 319
Query: 362 E-----TPKKNVISWTTMIN 406
+ + K NV ++ ++++
Sbjct: 320 KMLRDGSVKPNVGTYVSILS 339
Score = 105 bits (262), Expect = 6e-21
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 42/188 (22%)
Frame = +2
Query: 2 RNVVSWNTILTSLAKHGRIQEANDFFDRMPVKNLISWTSMIAGLLRNGRIDEARILFERM 181
RN++SWN ++T A++ RI EA+ F MP ++ SW +MI G +RN +++A LF+RM
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 182 PERNAVSWNMMITGYMQNMRFTEAFDLFKRMPE--------------------------- 280
PE+N +SW MITGY++N EA ++F +M
Sbjct: 291 PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG 350
Query: 281 --------KDTSSWNTMITGCIQN-----GDLRTAKRLFNE--TPKKNVISWTTMINGYA 415
K N ++T + N G+L A+++F+ ++++ISW +MI YA
Sbjct: 351 QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYA 410
Query: 416 QDNQGEEA 439
G+EA
Sbjct: 411 HHGHGKEA 418