BLASTX nr result

ID: Rauwolfia21_contig00033456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00033456
         (441 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]    67   3e-09
ref|XP_002266667.1| PREDICTED: uncharacterized ribonuclease sll1...    66   4e-09
ref|XP_006341019.1| PREDICTED: ribonuclease II, chloroplastic/mi...    64   2e-08
ref|XP_006480835.1| PREDICTED: ribonuclease II, chloroplastic/mi...    64   2e-08
ref|XP_006429096.1| hypothetical protein CICLE_v10011102mg [Citr...    64   2e-08
ref|XP_004246403.1| PREDICTED: ribonuclease II, chloroplastic/mi...    60   2e-07
ref|XP_002309062.2| hypothetical protein POPTR_0006s08640g [Popu...    58   1e-06
gb|EOY07507.1| Ribonuclease II, putative isoform 1 [Theobroma ca...    56   6e-06
ref|XP_002533996.1| ribonuclease II, putative [Ricinus communis]...    56   6e-06

>emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]
          Length = 754

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = +1

Query: 157 MAVRAMNSYTILRSAASPPLAAIRSCLHQFGTAKQRKYSKLGFIFSVLPSSRR--NACSI 330
           MAVRA+N+ +I RS +SPPL   R  LH FG  + + Y  LG  F +  + R   +   +
Sbjct: 351 MAVRAVNTCSIFRSTSSPPLYPFRCRLHHFGAFQCKSYPNLGLHFPICRTDRXFLSHGGV 410

Query: 331 RSYSVQSLVDTVLLELEAMRKSSRVRAANK--IATGGEL 441
           +S SV SLV++V+ EL A RK  R+ A+ K  + + G+L
Sbjct: 411 QSCSVYSLVESVMEELHASRKRKRIYASTKMGLTSSGQL 449


>ref|XP_002266667.1| PREDICTED: uncharacterized ribonuclease sll1290-like [Vitis
           vinifera]
          Length = 792

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = +1

Query: 157 MAVRAMNSYTILRSAASPPLAAIRSCLHQFGTAKQRKYSKLGFIFSVLPSSR--RNACSI 330
           MAVRA+N+ +I RS +SPPL   R  LH FG  + + Y  LG  F +  + R   +   +
Sbjct: 1   MAVRAVNTCSIFRSTSSPPLYPFRCRLHHFGAFQCKSYPNLGLHFPICRTDRVFLSHGGV 60

Query: 331 RSYSVQSLVDTVLLELEAMRKSSRVRAANK--IATGGEL 441
           +S SV SLV++V+ EL A RK  R+ A+ K  + + G+L
Sbjct: 61  QSCSVYSLVESVMEELHASRKRKRIYASTKMGLTSSGQL 99


>ref|XP_006341019.1| PREDICTED: ribonuclease II, chloroplastic/mitochondrial-like
           isoform X1 [Solanum tuberosum]
           gi|565348028|ref|XP_006341020.1| PREDICTED: ribonuclease
           II, chloroplastic/mitochondrial-like isoform X2 [Solanum
           tuberosum]
          Length = 793

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
 Frame = +1

Query: 157 MAVRAMNSYTILRSAASPPLAAIR--SCLHQFGTAKQRKYSKLGFIFSVLPSSRRNACSI 330
           MAVRAMNS  I RSAA+PPLA  R   CL     + + +   +   F        +  ++
Sbjct: 1   MAVRAMNSCVIFRSAATPPLAVSRRCCCLRLLTASSRHRNRSISHSFLRCAPYPLSHVTV 60

Query: 331 RSYSVQSLVDTVLLELEAMRKSSRVRAANKI--ATGGEL 441
           RSYSVQ+LV+ V+ EL ++ K  RVRA +K+   + GEL
Sbjct: 61  RSYSVQNLVEMVMEELASIHKRGRVRATSKVELVSTGEL 99


>ref|XP_006480835.1| PREDICTED: ribonuclease II, chloroplastic/mitochondrial-like
           isoform X2 [Citrus sinensis]
          Length = 719

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
 Frame = +1

Query: 154 IMAVRAMNSYTILRSAASPPLAA--IRSCLHQFGTAK-QRKYSKLGFIFSVLPSSRR--N 318
           +MAVRA+NS ++ RSAA PPL +  I+ C + F + + +R  S LGF      S R+  N
Sbjct: 1   MMAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRNKSNLGFRLPACRSERQFLN 60

Query: 319 ACSIRSYSVQSLVDTVLLELEAMRKSSRVRAANKIATG 432
               +S SV SLVD+V+ EL A+RK  RV A  K+++G
Sbjct: 61  RSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKVSSG 98


>ref|XP_006429096.1| hypothetical protein CICLE_v10011102mg [Citrus clementina]
           gi|567873015|ref|XP_006429097.1| hypothetical protein
           CICLE_v10011102mg [Citrus clementina]
           gi|568854440|ref|XP_006480834.1| PREDICTED: ribonuclease
           II, chloroplastic/mitochondrial-like isoform X1 [Citrus
           sinensis] gi|557531153|gb|ESR42336.1| hypothetical
           protein CICLE_v10011102mg [Citrus clementina]
           gi|557531154|gb|ESR42337.1| hypothetical protein
           CICLE_v10011102mg [Citrus clementina]
          Length = 794

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
 Frame = +1

Query: 154 IMAVRAMNSYTILRSAASPPLAA--IRSCLHQFGTAK-QRKYSKLGFIFSVLPSSRR--N 318
           +MAVRA+NS ++ RSAA PPL +  I+ C + F + + +R  S LGF      S R+  N
Sbjct: 1   MMAVRAVNSCSMFRSAACPPLVSFKIQCCYYHFRSLQLRRNKSNLGFRLPACRSERQFLN 60

Query: 319 ACSIRSYSVQSLVDTVLLELEAMRKSSRVRAANKIATG 432
               +S SV SLVD+V+ EL A+RK  RV A  K+++G
Sbjct: 61  RSGSQSCSVHSLVDSVMQELVAIRKRLRVFAKVKVSSG 98


>ref|XP_004246403.1| PREDICTED: ribonuclease II, chloroplastic/mitochondrial-like
           [Solanum lycopersicum]
          Length = 793

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
 Frame = +1

Query: 157 MAVRAMNSYTILRSAASPPLAAIRSC-----LHQFGTAKQRKYSKLGFIFSVLPSSRRNA 321
           MAVRAMNS  I RSAA+PPLA  R C     L  F   + R  S         P S    
Sbjct: 1   MAVRAMNSCVIFRSAATPPLAVSRRCCCVRQLTAFSRHRNRSNSHSFLRCVPYPLSH--- 57

Query: 322 CSIRSYSVQSLVDTVLLELEAMRKSSRVRAANKI--ATGGEL 441
            ++R+YSVQ+LV+ V+ EL ++ K  RVRA +++   + GEL
Sbjct: 58  VTVRNYSVQNLVEMVMEELASIHKRGRVRATSELESVSTGEL 99


>ref|XP_002309062.2| hypothetical protein POPTR_0006s08640g [Populus trichocarpa]
           gi|550335797|gb|EEE92585.2| hypothetical protein
           POPTR_0006s08640g [Populus trichocarpa]
          Length = 792

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 11/106 (10%)
 Frame = +1

Query: 154 IMAVRAMNSYTILRSAASPPLAAIRSCLHQF-----GTAKQRKYSKLGFIFSV----LPS 306
           +++VRA+NS +I RS  SPP+++ R  L+        ++   +YSK GF F V    LP 
Sbjct: 1   MISVRAVNSCSIFRS--SPPVSSFRCRLNSHLRTTTSSSHHDRYSKSGFGFPVFRFDLPI 58

Query: 307 SRRNACSIRSYSVQSLVDTVLLELEAMRKSSR--VRAANKIATGGE 438
                  +RSYS+QS VDTVL EL + RK  R  + +A K+ TGGE
Sbjct: 59  LGHG--DVRSYSLQSFVDTVLEELASYRKRKRQGICSAIKLTTGGE 102


>gb|EOY07507.1| Ribonuclease II, putative isoform 1 [Theobroma cacao]
           gi|508715613|gb|EOY07510.1| Ribonuclease II, putative
           isoform 1 [Theobroma cacao]
          Length = 795

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
 Frame = +1

Query: 154 IMAVRAMNSYTILRSAASPPLAAIRSCLHQFGTAKQRKYSKLGFIFSVLPSSRR--NACS 327
           +MAVRA+N  ++ RSAASPPL A       F +   R+ S+LG  F +     +      
Sbjct: 1   MMAVRAVNGGSLFRSAASPPLLAFWCGFRHFSSLPFRRNSELGLRFPIFCCENQFLGYGV 60

Query: 328 IRSYSVQSLVDTVLLELEAMRKSSRVRAANK--IATGGEL 441
            RS S  SLVD V+ EL A R+  RVRA  K  I + GEL
Sbjct: 61  GRSCSAYSLVDCVMEELAASRQRRRVRANVKVRITSTGEL 100


>ref|XP_002533996.1| ribonuclease II, putative [Ricinus communis]
           gi|223526007|gb|EEF28385.1| ribonuclease II, putative
           [Ricinus communis]
          Length = 731

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
 Frame = +1

Query: 154 IMAVRAMNSYTILRSAASPPLAAIRSCLHQFGTAKQRKYSKLGFIFSVLPSSRR---NAC 324
           +MAVRA+N+ +IL  + +PP   +R    +F T +  +YS L     ++    +   +  
Sbjct: 1   MMAVRAVNTCSILHFSKAPPFFLVRC---RFKTLRFCQYSNLSSRRPIIRCESQFQFHGT 57

Query: 325 SIRSYSVQSLVDTVLLELEAMRKSSRVRA--ANKIATGGEL 441
           +IRS+SVQSLVD+V+ EL ++RKS R R   A K+   GEL
Sbjct: 58  NIRSFSVQSLVDSVMEELASLRKSRRKRVCPAIKLTGSGEL 98


Top