BLASTX nr result

ID: Rauwolfia21_contig00033360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00033360
         (1127 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319985.1| hypothetical protein POPTR_0013s15630g [Popu...    95   5e-17
ref|XP_006842593.1| hypothetical protein AMTR_s00077p00166320 [A...    72   4e-10

>ref|XP_002319985.1| hypothetical protein POPTR_0013s15630g [Populus trichocarpa]
           gi|222858361|gb|EEE95908.1| hypothetical protein
           POPTR_0013s15630g [Populus trichocarpa]
          Length = 166

 Score = 95.1 bits (235), Expect = 5e-17
 Identities = 66/175 (37%), Positives = 90/175 (51%), Gaps = 24/175 (13%)
 Frame = -1

Query: 785 MGGSASCLRDLPCR-----REVLVMKENGDLLRFKEDTRVKDILAANPDHKVIRCCSDRT 621
           MGGS SC    PC      R VLV+K+NG +++ K  T VK+ILA+NP + ++RC SD++
Sbjct: 1   MGGSVSC----PCASGESGRHVLVIKQNGQVMKIKAGTHVKEILASNPRNSILRCRSDQS 56

Query: 620 --VLPDSFQLSCNQLYFLLPRGLLAPNDETFESLLKLAASRNSK--------------FS 489
             VLPDS +L  N LYFL+  G  A + +TF+ L++LA SR +                 
Sbjct: 57  LLVLPDSIELRSNGLYFLVEEGQRAIDKDTFDGLMRLARSRGAAGPKSTHHKKMPSDCSP 116

Query: 488 ALNCNRDI---LGGSQKPRESNCRTTYSKEDPGNHSNRWKPALQTIPEGNSPNSD 333
             N N DI   L   Q    + C   Y K      ++ W+PAL  IPE  S   D
Sbjct: 117 GTNDNEDIGPRLNWGQIAVLNACDVEYQK------TSSWRPALHPIPELRSLEED 165


>ref|XP_006842593.1| hypothetical protein AMTR_s00077p00166320 [Amborella trichopoda]
           gi|548844679|gb|ERN04268.1| hypothetical protein
           AMTR_s00077p00166320 [Amborella trichopoda]
          Length = 143

 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
 Frame = -1

Query: 728 MKENGDLLRFKEDTRVKDILAANPDHKVIRCCSDRTVLPDSFQLSCNQLYFLLPRGLLAP 549
           MKENG L+ FK+   VK++LA+   +K++   SD++++PDS +L   +LYFL+P  L   
Sbjct: 1   MKENGKLIEFKKRISVKEVLASYQSYKLVLYGSDQSIMPDSGELEVGRLYFLVPEKLAGC 60

Query: 548 NDETFESLLKLAASRNSKFSALNCNRDILGGSQKPRESNCRTTYSKE-----DPGNHSNR 384
           N E +E   K A  +    S ++   +  G S++P   + +    +         + S  
Sbjct: 61  N-EAYEEFRKTAEVKGLIRSRVSKKGNYPGKSREPDIISGQVVMGQHFLFEASELHRSPT 119

Query: 383 WKPALQTIPEGNSP 342
           W+P+LQTIPE  SP
Sbjct: 120 WRPSLQTIPEIASP 133


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