BLASTX nr result

ID: Rauwolfia21_contig00033349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00033349
         (1147 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006340909.1| PREDICTED: uncharacterized protein LOC102589...    66   2e-08
ref|XP_006340907.1| PREDICTED: uncharacterized protein LOC102588...    64   1e-07
ref|XP_006345850.1| PREDICTED: uncharacterized protein LOC102603...    59   5e-06

>ref|XP_006340909.1| PREDICTED: uncharacterized protein LOC102589164 isoform X1 [Solanum
            tuberosum] gi|565347802|ref|XP_006340910.1| PREDICTED:
            uncharacterized protein LOC102589164 isoform X2 [Solanum
            tuberosum]
          Length = 287

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
 Frame = +3

Query: 615  VSLLIPGAIFHNLMLMYLAFVYRYAPYACXXXXXXXXXXXXXXXXXXXXREFLGCDPLYL 794
            + +++ G + H ++L  + + YR  P+                         L  +  Y 
Sbjct: 144  ILMILWGMVAHPVLLASIIYWYRDMPFRLIGAKAKFKLEVIPMIIAAAFHHLLEFNYGYF 203

Query: 795  VFLIGFVCNAYIFARYLHVAYDVSLQDILLGVFLMALVYLTGGNLYISLVIYMLCAGVIL 974
              ++GF    Y  A ++H AYD+  +D+LLG+ +  L Y   G L +  +   LC  +  
Sbjct: 204  CLILGFTTYFYTIAHFMHAAYDIGGKDVLLGLVMPVLAYFLKGGLLVRGLGLSLCVVLCF 263

Query: 975  FRFWSYSPPAVPVVA-KESELLPC 1043
            +R+ +YS P VP    KE E LPC
Sbjct: 264  YRYVTYSAPEVPEHGKKELERLPC 287


>ref|XP_006340907.1| PREDICTED: uncharacterized protein LOC102588631 isoform X1 [Solanum
            tuberosum] gi|565347797|ref|XP_006340908.1| PREDICTED:
            uncharacterized protein LOC102588631 isoform X2 [Solanum
            tuberosum]
          Length = 235

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
 Frame = +3

Query: 615  VSLLIPGAIFHNLMLMYLAFVYRYAPYACXXXXXXXXXXXXXXXXXXXXREFLGCDPLYL 794
            + + + G + H  +L  + + YR  P+                         L  +  Y 
Sbjct: 92   ILMFLGGMVTHPALLTSIIYWYRDMPFRLIGAKAKFKLEVIPMIIAAAFHHLLEFNYGYF 151

Query: 795  VFLIGFVCNAYIFARYLHVAYDVSLQDILLGVFLMALVYLTGGNLYISLVIYMLCAGVIL 974
              ++G     Y  A ++ VAYD+  +D+LLG+ ++ L Y   G L +  +   LC  +  
Sbjct: 152  CLILGITAYFYTIAHFMRVAYDIGGKDVLLGLVMLVLAYFLEGGLLVRGLGLSLCVVLCF 211

Query: 975  FRFWSYSPPAVPVVA-KESELLPC 1043
            +R+ +YS P VP    KE E LPC
Sbjct: 212  YRYVTYSAPEVPEHGKKELERLPC 235


>ref|XP_006345850.1| PREDICTED: uncharacterized protein LOC102603825 [Solanum tuberosum]
          Length = 268

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
 Frame = +3

Query: 765  EFLGCDPLYLVFLIGFVCNAYIFARYLHVAYDVSLQDILLGVFLMALVYLTGGNLYISLV 944
            +FL  +  Y   L+G     YI + ++  AYD+S +D++LG+ +    ++  G L++  +
Sbjct: 177  QFLELNYGYFFLLLGCTGYFYIISHFMRRAYDISGKDVMLGLAMQTFCFMANGMLFVRAI 236

Query: 945  IYMLCAGVILFRFWSYS-PPAVPVVAKESELLP 1040
                C G+ ++R+ +YS PPA+P    + ELLP
Sbjct: 237  ALSFCFGISIYRYVTYSTPPALP--RPKMELLP 267


Top