BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00032938
         (384 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-10
gb|ESW30051.1| hypothetical protein PHAVU_002G120500g [Phaseolus...    69   7e-10
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...    69   9e-10
gb|EOY32970.1| Pentatricopeptide repeat-containing protein, puta...    66   6e-09
ref|NP_174459.1| pentatricopeptide repeat-containing protein [Ar...    64   3e-08
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...    61   2e-07
ref|XP_002893686.1| pentatricopeptide repeat-containing protein ...    59   5e-07

>ref|XP_004512307.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Cicer arietinum]
          Length = 418

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
 Frame = +2

Query: 47  QAVIAPPHSMQMPNITSTHKNIITLASYSPSNSSIQIQLP------LNRPQHKRHQPILE 208
           +A+ APP +  + N   T  +         SN  + ++LP      +N P H   QP+  
Sbjct: 2   EAIAAPPPTPPIRNTNITSPS---------SNHQLHLRLPFRNPKLINFPHHPSSQPLTV 52

Query: 209 FPK------KINGSNPRTRSTTSDVLRLMDSLKLPVTIDFYVSLIKECTRRGEPLHAVEL 370
            P       K   +N R  +TTS +L LMD+L  P+ ID Y SL+KECT  G+P  A EL
Sbjct: 53  TPPRNKNNTKNKNNNKRKSATTSHILPLMDALHFPIPIDIYTSLVKECTLSGDPETATEL 112

Query: 371 LNHV 382
            +H+
Sbjct: 113 HSHI 116


>gb|ESW30051.1| hypothetical protein PHAVU_002G120500g [Phaseolus vulgaris]
          Length = 420

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
 Frame = +2

Query: 137 SNSSIQIQL--PLNRPQHKRHQPILE----FPKKINGSNPRTRSTTSDVLRLMDSLKLPV 298
           S+ S Q++L  PL  P H   +P++     F KK      R  +TT D+L LMD+L  P+
Sbjct: 33  SSPSHQLELLPPLRYPIHTFPRPLIPQTTTFTKKEIKKKKRKEATTLDILHLMDALPFPI 92

Query: 299 TIDFYVSLIKECTRRGEPLHAVELLNHV 382
           TID Y SLIKECT  G+P  A+EL  H+
Sbjct: 93  TIDIYTSLIKECTVSGDPETAIELYTHI 120


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
 Frame = +2

Query: 86  NITSTHKNIITLASYSPSNSSIQIQLPL-----NRPQHKRHQPILE---FPKKINGSNPR 241
           N+   +  + TL S    N  ++ +LPL     N P H   QP+ +   F KK      R
Sbjct: 21  NVDLKNSKLRTLPS---PNHQLEFRLPLRHPIHNFPNHTSPQPLTQTTTFTKK-KKKKKR 76

Query: 242 TRSTTSDVLRLMDSLKLPVTIDFYVSLIKECTRRGEPLHAVELLNHV 382
             +TTSD+L LM++L  PV ID Y SLIKECT  G+P  A+EL  H+
Sbjct: 77  KGATTSDILHLMEALPFPVPIDIYTSLIKECTVSGDPETAIELATHI 123


>gb|EOY32970.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 413

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
 Frame = +2

Query: 41  LRQAVIAPPHSMQMPNITSTHKNIITLASYSPSNSSIQIQLPLNRPQHKRHQPILEFP-- 214
           +   V++P     +P+   T ++  T A   P  S +  QLPL   +     P    P  
Sbjct: 6   MEMEVVSPALPPMLPSNKLTFRSQATPA---PPISQLHSQLPLRITKQSSKTPPPPTPIS 62

Query: 215 -KKINGSNPRTRSTTSDVLRLMDSLKLPVTIDFYVSLIKECTRRGEPLHAVELLNHV 382
             K   SNP +  TTSD+LRLMDSL LP+  D Y SL+KECT       A+EL +H+
Sbjct: 63  TSKPISSNPCSSHTTSDILRLMDSLSLPIPPDIYASLVKECTVTRHSRRALELHSHI 119


>ref|NP_174459.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169166|sp|Q9C6R9.1|PPR66_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g31790 gi|12321298|gb|AAG50719.1|AC079041_12
           hypothetical protein [Arabidopsis thaliana]
           gi|111074348|gb|ABH04547.1| At1g31790 [Arabidopsis
           thaliana] gi|332193272|gb|AEE31393.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 409

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
 Frame = +2

Query: 59  APPHSMQMPNITSTHKNIITLASYSPSNSSIQIQLPLNRPQHKRHQPILEFPK-KINGSN 235
           +PP  +   N  ST +++      +   ++  +QL L +P+H++ +P++   + +I   N
Sbjct: 11  SPPSLVPSFNYNSTARSV-----GNDVRTNFDVQLFLRKPKHQKSEPVVVIQQPQIQPQN 65

Query: 236 PRTRSTTSDVLRLMDSLKLPVTIDFYVSLIKECTRRGEPLHAVELLNHV 382
           P +R +TSD+LRLMDSL LP   D Y  L KE  R  +   A EL  H+
Sbjct: 66  PSSRCSTSDILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHI 114


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
 Frame = +2

Query: 47  QAVIAPPHSMQMPNITSTHKNIITLASYSPSNSSIQ--IQLPLNRPQ--------HKRHQ 196
           +A++APP     P   +  +N  T ++ SP ++     ++LPL R          H   Q
Sbjct: 2   EAIVAPPP----PAPPTRRRNADTTSTTSPPSNHQPHLLRLPLRRNPKPKNLSLIHPSSQ 57

Query: 197 PILEFPKKINGSNPRTRSTTSDVLRLMDSLKLPVTIDFYVSLIKECTRRGEPLHAVEL 370
           PI   PKK      R   TTS +L LMD+L  P+TID Y SL+KECT   +P  A+EL
Sbjct: 58  PITP-PKK--SKRRRKCDTTSHILPLMDALHFPITIDIYTSLVKECTLSTDPETAIEL 112


>ref|XP_002893686.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339528|gb|EFH69945.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 410

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
 Frame = +2

Query: 143 SSIQIQLPLNRPQHKRHQPILEFPK-KINGSNPRTRSTTSDVLRLMDSLKLPVTIDFYVS 319
           ++  +QL L +P+H++ +P++   + +I    P  R +TSD+LRLMDSL LP   D Y  
Sbjct: 34  TNFDVQLFLRKPKHQKSEPVVVIQQPQIQPQKPSPRCSTSDILRLMDSLSLPGNEDLYSC 93

Query: 320 LIKECTRRGEPLHAVELLNHV 382
           L KE  R  +   A EL  H+
Sbjct: 94  LAKESARENDRRGAYELQVHI 114