BLASTX nr result

ID: Rauwolfia21_contig00032925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00032925
         (631 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...    62   1e-07
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...    62   2e-07
ref|XP_006580826.1| PREDICTED: uncharacterized protein LOC102663...    62   2e-07
gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p...    59   9e-07
ref|XP_004239564.1| PREDICTED: uncharacterized protein LOC101259...    58   2e-06
ref|XP_006381710.1| hypothetical protein POPTR_0006s16215g [Popu...    57   3e-06
ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248...    57   6e-06

>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 25/70 (35%), Positives = 39/70 (55%)
 Frame = -3

Query: 626  HLFFQCSFVRAIWNPIKQWLGIRRNMSTLPSALKWISKESRGSCWQSKAKKLGLATTLFY 447
            HLFF C  ++ IW  +  WL I    ST    L WI+++ +G  W++   K     T+++
Sbjct: 834  HLFFGCIELKTIWTAVLNWLQIIHMPSTWSEELNWITRKCKGKGWRAMLLKCAFTETIYH 893

Query: 446  IWAARNRKIF 417
            IWA RN ++F
Sbjct: 894  IWAYRNHRVF 903


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/83 (33%), Positives = 47/83 (56%)
 Frame = -3

Query: 626 HLFFQCSFVRAIWNPIKQWLGIRRNMSTLPSALKWISKESRGSCWQSKAKKLGLATTLFY 447
           HLFF C   + +W  + QW+ IR + S  P+ L W++  ++G   ++   K+ +A T++ 
Sbjct: 396 HLFFVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWLTHHTKGKGTRAAVLKMAIAETIYE 455

Query: 446 IWAARNRKIFEDLQPSTVDTIHK 378
           IW  RN KIF   Q   ++T+ K
Sbjct: 456 IWNIRNNKIFG--QAIDINTVGK 476


>ref|XP_006580826.1| PREDICTED: uncharacterized protein LOC102663778 [Glycine max]
          Length = 145

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/90 (31%), Positives = 48/90 (53%)
 Frame = -3

Query: 626 HLFFQCSFVRAIWNPIKQWLGIRRNMSTLPSALKWISKESRGSCWQSKAKKLGLATTLFY 447
           HLFF CS +  +W  + +W+ ++ +       LKWI +  +G   ++   KL +  T++ 
Sbjct: 39  HLFFGCSVLGDVWKQVLKWIQVKHHPQEWNEELKWIIRHGKGKGHKASILKLAVTETVYG 98

Query: 446 IWAARNRKIFEDLQPSTVDTIHKIKTQVYK 357
           IW  RN KIFE++  +T    + I   VY+
Sbjct: 99  IWKYRNAKIFEEIVDNTNIVDYIIDNIVYR 128


>gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 196

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 26/89 (29%), Positives = 46/89 (51%)
 Frame = -3

Query: 626 HLFFQCSFVRAIWNPIKQWLGIRRNMSTLPSALKWISKESRGSCWQSKAKKLGLATTLFY 447
           HLFF C +  A+W  + +W+ +  N S   S L++I      +    +A ++ L+ TL+ 
Sbjct: 90  HLFFSCDYADAVWKGVMRWMNMTVNTSNWHSILQYIQSHCNSNNGMHQAHRMVLSETLYV 149

Query: 446 IWAARNRKIFEDLQPSTVDTIHKIKTQVY 360
           IW  RN + F++   S    +++IK   Y
Sbjct: 150 IWKERNDRKFQNCYRSVQQLLNQIKMDAY 178


>ref|XP_004239564.1| PREDICTED: uncharacterized protein LOC101259935 [Solanum
           lycopersicum]
          Length = 189

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = -3

Query: 626 HLFFQCSFVRAIWNPIKQWLGIRRNM-STLPSALKWISKESRGSCWQSKAKKLGLATTLF 450
           HLF QC +  AIW  + +W+ +  NM  +    ++W  K  +G   +++  K  LA  ++
Sbjct: 89  HLFIQCHYAEAIWERLLRWINVHSNMPKSWTEFIQWCVKNGKGKTVRAQVFKGVLAEGVY 148

Query: 449 YIWAARNRKIFEDLQPSTVDTIHKIKTQVYKIMFSLYPNVL 327
            +W+ RN++IFE+ + S +D + K   ++  +  + +PN L
Sbjct: 149 GLWSERNKRIFEE-KSSLIDEVVK---RIAYVTIARFPNRL 185


>ref|XP_006381710.1| hypothetical protein POPTR_0006s16215g [Populus trichocarpa]
           gi|550336461|gb|ERP59507.1| hypothetical protein
           POPTR_0006s16215g [Populus trichocarpa]
          Length = 155

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 30/91 (32%), Positives = 57/91 (62%)
 Frame = -3

Query: 623 LFFQCSFVRAIWNPIKQWLGIRRNMSTLPSALKWISKESRGSCWQSKAKKLGLATTLFYI 444
           LFF C++   +W  I+ WL + R M+TL SA + +S  +R    +++ +++ L+ T++ I
Sbjct: 54  LFFACNWTSILWRKIRAWLRMNRRMATLNSATRGLS--TRKKNLEARMRRVSLSITVYLI 111

Query: 443 WAARNRKIFEDLQPSTVDTIHKIKTQVYKIM 351
           W  RN++IF++   + V+ I++ K QV+  M
Sbjct: 112 WEERNKRIFDNTY-NLVELIYR-KFQVFFYM 140


>ref|XP_004253231.1| PREDICTED: uncharacterized protein LOC101248660 [Solanum
           lycopersicum]
          Length = 187

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 27/101 (26%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = -3

Query: 626 HLFFQCSFVRAIWNPIKQWLGIRRNM-STLPSALKWISKESRGSCWQSKAKKLGLATTLF 450
           HLF  C +  AIW  + +W+ ++ NM  +    ++W  K  +G   +++  K  LA  ++
Sbjct: 89  HLFIHCHYAEAIWERLLRWINVQINMPKSWTDFIQWCVKNGKGKTARAQMFKGILAEGVY 148

Query: 449 YIWAARNRKIFEDLQPSTVDTIHKIKTQVYKIMFSLYPNVL 327
            +W+ RN++IFE+ + S +D + K   ++  +  +++P +L
Sbjct: 149 GLWSKRNKRIFEE-KSSLIDEVVK---RIAYVTIAIFPKIL 185


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