BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00032845
         (348 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           121   1e-25
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          56   4e-06

>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  121 bits (303), Expect = 1e-25
 Identities = 65/119 (54%), Positives = 76/119 (63%), Gaps = 4/119 (3%)
 Frame = -2

Query: 347  KSNEDSVEFELPPTVAPRQVGVDDQANQPEAPDVPIEIEPAXXXXXXXXXXXXD----QT 180
            KS +DS EFELPPTV PRQVG D Q NQPEAP +P E E A                 Q 
Sbjct: 715  KSTDDSAEFELPPTVVPRQVGDDVQDNQPEAPGLPNEDELADTEGNEDNGDDDADEEDQP 774

Query: 179  *PTLPNNSPYRTRFDRVV*WSARYSPWKYVMLTDGREPENYEEVIHDEHQKKWFKAMQD 3
             P + NN PY TR  RVV  S RYSP +YV+LTDG EP+++EE I DEH++KW +AMQD
Sbjct: 775  QPPILNNPPYHTRSGRVVQQSTRYSPHEYVLLTDGGEPDSFEEAIDDEHKEKWIEAMQD 833


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 25/47 (53%), Positives = 35/47 (74%)
 Frame = -2

Query: 143 RFDRVV*WSARYSPWKYVMLTDGREPENYEEVIHDEHQKKWFKAMQD 3
           R DR    S RYSP +YV+LTDG EPE+YEE +  + +++WF+AMQ+
Sbjct: 784 RSDRERRPSTRYSPSQYVLLTDGGEPESYEEAMESDQKRQWFEAMQE 830