BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00032472
         (1386 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   353   7e-95
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   353   7e-95
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   351   4e-94
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   345   2e-92
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   340   6e-91
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom...   340   8e-91
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   339   1e-90
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...   318   4e-84
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...   318   4e-84
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...   318   4e-84
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   313   1e-82
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu...   300   7e-79
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe...   294   5e-77
ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Popu...   288   3e-75
emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]      288   5e-75
gb|ABD96891.1| hypothetical protein [Cleome spinosa]                  282   2e-73
ref|XP_002533596.1| conserved hypothetical protein [Ricinus comm...   279   2e-72
ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutr...   263   1e-67
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   263   2e-67
ref|XP_006289882.1| hypothetical protein CARUB_v10003497mg [Caps...   258   3e-66

>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  353 bits (907), Expect = 7e-95
 Identities = 203/364 (55%), Positives = 233/364 (64%), Gaps = 3/364 (0%)
 Frame = +1

Query: 304  KATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQKF 483
            K T   +NP   S IMWRN  KQ+SSRT  P K    FS   RT SF GF QDSIF    
Sbjct: 20   KPTGLDINPYHNSPIMWRNIIKQLSSRT--PQKLL--FSSKNRTYSFLGFGQDSIFKDNT 75

Query: 484  NFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXXXX 663
             F+ L   SCSN     +    +GE+   +EFL RP +   K+QVN N  C KSY     
Sbjct: 76   KFRSLIPISCSNI---VMGFQNLGEYLPGDEFLSRPLI---KNQVNNNFCCRKSYASVAE 129

Query: 664  XXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRRQ 843
                                ELLTE+K+EE KQ     R++  +  GMG +KY  L+RRQ
Sbjct: 130  AVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQ 189

Query: 844  VKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQGK 1023
            VK+ETEAWEQAAKEYKELL DMCEQKLAPNLPY+KSLFLGW+EP+ +KIAEEQE   QGK
Sbjct: 190  VKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGK 249

Query: 1024 SKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIH-- 1197
            SK AY KY   LPA+MMAVI MHKL+GL+MTGG+HG ARVVQAA +IGDA+EQEVRIH  
Sbjct: 250  SKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNF 309

Query: 1198 -XXXXXXXXXXXXXAEGNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPWGQD 1374
                           E    VT +QE LRK VTNLMKKQKLRAV QIV+ QDDSKPWGQD
Sbjct: 310  LEKTKKQKAEKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQD 369

Query: 1375 TKAK 1386
             +AK
Sbjct: 370  ARAK 373


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  353 bits (907), Expect = 7e-95
 Identities = 203/364 (55%), Positives = 233/364 (64%), Gaps = 3/364 (0%)
 Frame = +1

Query: 304  KATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQKF 483
            K T   +NP   S IMWRN  KQ+SSRT  P K    FS   RT SF GF QDSIF    
Sbjct: 20   KPTGLDINPYHNSPIMWRNIIKQLSSRT--PQKLL--FSSKNRTYSFLGFGQDSIFKDNT 75

Query: 484  NFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXXXX 663
             F+ L   SCSN     +    +GE+   +EFL RP +   K+QVN N  C KSY     
Sbjct: 76   KFRSLIPISCSNI---VMGFQNLGEYLPGDEFLSRPLI---KNQVNNNFCCRKSYASVAE 129

Query: 664  XXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRRQ 843
                                ELLTE+K+EE KQ     R++  +  GMG +KY  L+RRQ
Sbjct: 130  AVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRRQ 189

Query: 844  VKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQGK 1023
            VK+ETEAWEQAAKEYKELL DMCEQKLAPNLPY+KSLFLGW+EP+ +KIAEEQE   QGK
Sbjct: 190  VKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGK 249

Query: 1024 SKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIH-- 1197
            SK AY KY   LPA+MMAVI MHKL+GL+MTGG+HG ARVVQAA +IGDA+EQEVRIH  
Sbjct: 250  SKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNF 309

Query: 1198 -XXXXXXXXXXXXXAEGNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPWGQD 1374
                           E    VT +QE LRK VTNLMKKQKLRAV QIV+ QDDSKPWGQD
Sbjct: 310  LEKTKKQKAEKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQD 369

Query: 1375 TKAK 1386
             +AK
Sbjct: 370  ARAK 373


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  351 bits (901), Expect = 4e-94
 Identities = 205/365 (56%), Positives = 234/365 (64%), Gaps = 4/365 (1%)
 Frame = +1

Query: 304  KATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQKF 483
            K T   +N    S IMWRN  KQ+SSRT  P K    FS   RT SF GF QDS+F    
Sbjct: 20   KPTGLDINRYHNSPIMWRNIIKQLSSRT--PQKLL--FSSKNRTYSFLGFGQDSVFKDNT 75

Query: 484  NFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALC-PKSYXXXX 660
             F+ L   SCSN     +    +GE+   +EFL RP L   K+QVN N  C  KSY    
Sbjct: 76   KFRSLIPISCSNI---VMGFQNLGEYLPGDEFLSRPLL---KNQVNSNDFCCRKSYASVA 129

Query: 661  XXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRR 840
                                QELLTE+K+EE KQ     R++  +  GMG +KY  L+RR
Sbjct: 130  EAVAVSSTDAEEDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLKRR 189

Query: 841  QVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQG 1020
            QVK+ETEAWEQAAKEYKELL DMCEQKLAPNLPY+KSLFLGW+EP+ +KIAEEQE   QG
Sbjct: 190  QVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQG 249

Query: 1021 KSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIH- 1197
            KSK AY KYL  LPA+MMAVI MHKL+GL+MTGG+HG ARVVQAA +IGDA+EQEVRIH 
Sbjct: 250  KSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHN 309

Query: 1198 --XXXXXXXXXXXXXAEGNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPWGQ 1371
                            E    VT +QE LRK VTNLMKKQKLRAV QIV+ QDDSKPWGQ
Sbjct: 310  FLEKTKKQKAEKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPWGQ 369

Query: 1372 DTKAK 1386
            D KAK
Sbjct: 370  DAKAK 374


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  345 bits (886), Expect = 2e-92
 Identities = 200/362 (55%), Positives = 231/362 (63%), Gaps = 3/362 (0%)
 Frame = +1

Query: 310  TKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQKFNF 489
            T    NP   S IMWRN  KQ SSRT  P K   T     RT SF GF QDS+F  K   
Sbjct: 18   TNLETNPYQNSPIMWRNIVKQFSSRT--PQKILLTSKN--RTYSFLGFGQDSVFKDKRIL 73

Query: 490  KHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXXXXXX 669
            +     SCSN G  E+    +GEF   +EFL RP L +MKSQV+ N +C KSY       
Sbjct: 74   RSFIPVSCSNSGFLEMGFQNLGEF---DEFLRRPLLCAMKSQVSNNDICRKSYASVAEAV 130

Query: 670  XXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRRQVK 849
                             QELLTE+K+EE KQ     R +  +  G+ R+KY AL+RRQVK
Sbjct: 131  AVSSTDAEEDVSVVGEVQELLTELKKEEKKQFTFRRRNQRLLTSGIDRRKYPALKRRQVK 190

Query: 850  IETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQGKSK 1029
            IET+AWE AAKEY+ELL DMCEQKLAPNLPY+KSLFLGW+EP+ +KIA+EQE   QGKSK
Sbjct: 191  IETQAWELAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQEQELCIQGKSK 250

Query: 1030 VAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIH---X 1200
             AY KY   LPA+MMAVI MHKL+GL+MTGGEHG ARVVQAA  IGDA+EQEVRIH    
Sbjct: 251  AAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNARVVQAALTIGDAIEQEVRIHKFLE 310

Query: 1201 XXXXXXXXXXXXAEGNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPWGQDTK 1380
                         E     T +Q+ L K VT+LMKKQKLRAV QIV++QDDSKPWGQD K
Sbjct: 311  KTEKHKAEKDRKMEDGEHATLEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAK 370

Query: 1381 AK 1386
            AK
Sbjct: 371  AK 372


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score =  340 bits (873), Expect = 6e-91
 Identities = 191/357 (53%), Positives = 227/357 (63%), Gaps = 3/357 (0%)
 Frame = +1

Query: 325  NPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQKFNFKHLDF 504
            NP  IS IMWRN  KQ S+RT   I   +    +    S+ GF   S+F  K   +    
Sbjct: 23   NPYHISPIMWRNIVKQFSTRTPQKILLTSKNHAY----SYLGFGLHSVFKDKRTLRSFIP 78

Query: 505  NSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXXXXXXXXXXX 684
             SCSN G  E+    +GEF   +EFL RP L +MKSQV+ N +C K+Y            
Sbjct: 79   VSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNNDICRKNYASVAEAVAVSST 138

Query: 685  XXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRRQVKIETEA 864
                        QELLTE+K+EE KQ     R++  +  G+ R+KY AL RRQVKIET+A
Sbjct: 139  DAEEDVSVVGEVQELLTELKKEEKKQFTFRRRKQRMLTSGIDRRKYPALMRRQVKIETQA 198

Query: 865  WEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQGKSKVAYGK 1044
            WEQAAKEY+ELL DMCEQKLAPNLPY+KSLFLGW+EP+ +KIA+EQE   QGKSK AY K
Sbjct: 199  WEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAQEQELCIQGKSKAAYSK 258

Query: 1045 YLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIH---XXXXXX 1215
            Y   LPA+MMAVI MHKL+GL+MTGGEHG  RVVQAA  IGDA+EQEVRIH         
Sbjct: 259  YFHLLPADMMAVITMHKLMGLLMTGGEHGNVRVVQAALTIGDAIEQEVRIHKFLEKTEKH 318

Query: 1216 XXXXXXXAEGNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPWGQDTKAK 1386
                    E     T +Q+ L K VT+LMKKQKLRAV QIV++QDDSKPWGQD KAK
Sbjct: 319  KAEKDRNMEDGEHATLEQKKLHKKVTSLMKKQKLRAVNQIVRSQDDSKPWGQDAKAK 375


>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1100

 Score =  340 bits (872), Expect = 8e-91
 Identities = 193/390 (49%), Positives = 240/390 (61%), Gaps = 8/390 (2%)
 Frame = +1

Query: 241  ELSLLSAGI--KIDHLIPLPIDKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATT 414
            E  L+S+ +  K DH +PL  ++  +    NPP IS +MWRN AK   SR         +
Sbjct: 5    ETPLISSNLLDKFDHFVPLD-NRNPSILYQNPPKISIVMWRNIAKHAISRR------THS 57

Query: 415  FSPFCRTCSFFGFSQDSIFSQKFNFKHLDFNS-CSNFGCPELDAWKVGEFSARNEFLGRP 591
            F  F RT SF G SQDSIF +K  F+ L F S CSN    ++   ++GE     E++G+ 
Sbjct: 58   FQCFARTYSFLGTSQDSIFHEKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNVEYIGKQ 117

Query: 592  SLHSMKSQVNINALCPKSYXXXXXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNI 771
            S  S ++++  + LCP+ Y                        +ELL EMK+E+ ++   
Sbjct: 118  SFGSPRNEIGCSGLCPRGYVSVAEAVSSTDVEEDVSVVEEI--KELLDEMKKEQRRETGN 175

Query: 772  LWRRRHKMAHGMGRKKYLALRRRQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKS 951
              RR   +  GMG  KY  LRRRQVKIETEAWEQAAKEY+ELL DMCE KLAPNLPYIKS
Sbjct: 176  RRRRCQIIERGMGESKYRFLRRRQVKIETEAWEQAAKEYRELLMDMCEHKLAPNLPYIKS 235

Query: 952  LFLGWYEPMCNKIAEEQESFRQGKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHG 1131
            LFLGW+EP+ + I +EQE +R GK +  Y  YL  LPA+M AVI MHKL+GL+MTGGEHG
Sbjct: 236  LFLGWFEPLRDAIIKEQELYRLGKLRAGYAGYLDQLPADMTAVITMHKLMGLLMTGGEHG 295

Query: 1132 IARVVQAACLIGDAVEQEVRIHXXXXXXXXXXXXXAEGNTTVTP-----QQENLRKTVTN 1296
             ARVVQAACLIGDA+EQEVRIH                +    P     +QE LRK VT+
Sbjct: 296  CARVVQAACLIGDAIEQEVRIHKFLEKTKKKRVDKKNEDEGDKPNAEIKEQEKLRKKVTD 355

Query: 1297 LMKKQKLRAVQQIVKAQDDSKPWGQDTKAK 1386
            L+KKQKL AV+QIVK QDD+KPWGQD KAK
Sbjct: 356  LIKKQKLPAVRQIVKGQDDTKPWGQDAKAK 385


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  339 bits (870), Expect = 1e-90
 Identities = 188/367 (51%), Positives = 229/367 (62%), Gaps = 5/367 (1%)
 Frame = +1

Query: 301  KKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQK 480
            +K T F  NP    T+MWRN AK+   R      +  +  P  R  SF GFSQD IF + 
Sbjct: 24   EKPTNFRPNPLKKPTVMWRNIAKRAIPRAPRKCVYLDS-QPLSRRYSFLGFSQDLIFPEI 82

Query: 481  FNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXXX 660
              F   + +SCS+ G  E+   ++GE S+R + +GRPS   +++Q+  +  CPKSY    
Sbjct: 83   MKFGTFEPSSCSSSGFSEMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYASVA 142

Query: 661  XXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRR 840
                                QELL EMK+EE +Q N   R + KM  GM + +YL LRRR
Sbjct: 143  EAVSSTDVEEDVSASDEI--QELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRR 200

Query: 841  QVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQG 1020
            QVKIETEAWE AAKEYKELL DMCEQKLAPNLPY+KSLFLGW+EP+ + I +EQE  R G
Sbjct: 201  QVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLG 260

Query: 1021 KSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIHX 1200
            K+K AY  Y   LPA+MM+VI MHKLVGL+MTGGEHG  RVVQAAC+IGDA+EQEVRIH 
Sbjct: 261  KNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHN 320

Query: 1201 XXXXXXXXXXXXAE-----GNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPW 1365
                         +     G   V  +QE LRK VTNLMKKQKL A +QIVK  D+SKPW
Sbjct: 321  FLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPW 380

Query: 1366 GQDTKAK 1386
            G + KAK
Sbjct: 381  GPEAKAK 387


>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533046|gb|ESR44229.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score =  318 bits (814), Expect = 4e-84
 Identities = 186/370 (50%), Positives = 225/370 (60%), Gaps = 7/370 (1%)
 Frame = +1

Query: 298  DKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQ 477
            + K T    +P  IS++MWRN AKQ  S  L          PF R  SF G SQDSI  +
Sbjct: 30   NNKPTIRFPSPEKISSVMWRNVAKQAISLHLK--------KPFSRAYSFLGISQDSILRE 81

Query: 478  KFNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXX 657
            K  F  LD       G  E+ + ++GE     +++GR S   +K   N N  CP+ Y   
Sbjct: 82   KVKFGCLDMVPR---GIHEVGSGRIGEILNHEDYMGRTSFGVLK---NDNFWCPRGYATV 135

Query: 658  XXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQ-RNILWRRRHKMAHGMGRKKYLALR 834
                                 QELL EMK+EE ++  N   R R ++A GMG  KY  L+
Sbjct: 136  AEAVSSTDVEEDVSIVEEI--QELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLK 193

Query: 835  RRQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFR 1014
             RQVKIETEAWEQAA EY+ELL DMCEQKLAPNLPY+KSLFLGW+EP+ + IA+EQE  R
Sbjct: 194  MRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCR 253

Query: 1015 QGKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRI 1194
              K KVAY  Y   LPA+MMAVI MHKL+GL+MTGGEHG ARVVQAAC+IGDA+EQEVRI
Sbjct: 254  MAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRI 313

Query: 1195 H------XXXXXXXXXXXXXAEGNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDS 1356
            H                    + + TVT +QE LRK VT+L+KKQKL AV++IVK QDD 
Sbjct: 314  HKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDF 373

Query: 1357 KPWGQDTKAK 1386
            KPWGQD +AK
Sbjct: 374  KPWGQDARAK 383


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533045|gb|ESR44228.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score =  318 bits (814), Expect = 4e-84
 Identities = 186/370 (50%), Positives = 225/370 (60%), Gaps = 7/370 (1%)
 Frame = +1

Query: 298  DKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQ 477
            + K T    +P  IS++MWRN AKQ  S  L          PF R  SF G SQDSI  +
Sbjct: 30   NNKPTIRFPSPEKISSVMWRNVAKQAISLHLK--------KPFSRAYSFLGISQDSILRE 81

Query: 478  KFNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXX 657
            K  F  LD       G  E+ + ++GE     +++GR S   +K   N N  CP+ Y   
Sbjct: 82   KVKFGCLDMVPR---GIHEVGSGRIGEILNHEDYMGRTSFGVLK---NDNFWCPRGYATV 135

Query: 658  XXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQ-RNILWRRRHKMAHGMGRKKYLALR 834
                                 QELL EMK+EE ++  N   R R ++A GMG  KY  L+
Sbjct: 136  AEAVSSTDVEEDVSIVEEI--QELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLK 193

Query: 835  RRQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFR 1014
             RQVKIETEAWEQAA EY+ELL DMCEQKLAPNLPY+KSLFLGW+EP+ + IA+EQE  R
Sbjct: 194  MRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCR 253

Query: 1015 QGKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRI 1194
              K KVAY  Y   LPA+MMAVI MHKL+GL+MTGGEHG ARVVQAAC+IGDA+EQEVRI
Sbjct: 254  MAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRI 313

Query: 1195 H------XXXXXXXXXXXXXAEGNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDS 1356
            H                    + + TVT +QE LRK VT+L+KKQKL AV++IVK QDD 
Sbjct: 314  HKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDF 373

Query: 1357 KPWGQDTKAK 1386
            KPWGQD +AK
Sbjct: 374  KPWGQDARAK 383


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533044|gb|ESR44227.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score =  318 bits (814), Expect = 4e-84
 Identities = 186/370 (50%), Positives = 225/370 (60%), Gaps = 7/370 (1%)
 Frame = +1

Query: 298  DKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQ 477
            + K T    +P  IS++MWRN AKQ  S  L          PF R  SF G SQDSI  +
Sbjct: 30   NNKPTIRFPSPEKISSVMWRNVAKQAISLHLK--------KPFSRAYSFLGISQDSILRE 81

Query: 478  KFNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXX 657
            K  F  LD       G  E+ + ++GE     +++GR S   +K   N N  CP+ Y   
Sbjct: 82   KVKFGCLDMVPR---GIHEVGSGRIGEILNHEDYMGRTSFGVLK---NDNFWCPRGYATV 135

Query: 658  XXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQ-RNILWRRRHKMAHGMGRKKYLALR 834
                                 QELL EMK+EE ++  N   R R ++A GMG  KY  L+
Sbjct: 136  AEAVSSTDVEEDVSIVEEI--QELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLK 193

Query: 835  RRQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFR 1014
             RQVKIETEAWEQAA EY+ELL DMCEQKLAPNLPY+KSLFLGW+EP+ + IA+EQE  R
Sbjct: 194  MRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCR 253

Query: 1015 QGKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRI 1194
              K KVAY  Y   LPA+MMAVI MHKL+GL+MTGGEHG ARVVQAAC+IGDA+EQEVRI
Sbjct: 254  MAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRI 313

Query: 1195 H------XXXXXXXXXXXXXAEGNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDS 1356
            H                    + + TVT +QE LRK VT+L+KKQKL AV++IVK QDD 
Sbjct: 314  HKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDF 373

Query: 1357 KPWGQDTKAK 1386
            KPWGQD +AK
Sbjct: 374  KPWGQDARAK 383


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score =  313 bits (802), Expect = 1e-82
 Identities = 184/369 (49%), Positives = 224/369 (60%), Gaps = 6/369 (1%)
 Frame = +1

Query: 298  DKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQ 477
            + K T    +P  IS++MWRN AKQ  S  L          PF R  SF G SQDSI  +
Sbjct: 30   NNKPTIRFPSPEKISSVMWRNVAKQAISLHLK--------KPFSRAYSFLGISQDSILRE 81

Query: 478  KFNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXX 657
            K  F  LD       G  E+ + ++GE     +++GR S   +K   N N  CP+ Y   
Sbjct: 82   KVKFGCLDMVPR---GIHEVGSGRIGEILNHEDYMGRTSFGVLK---NDNFWCPRGYATV 135

Query: 658  XXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRR 837
                                 QELL EMK+E   Q++   R R ++A GMG  KY  L+ 
Sbjct: 136  AEAVSSTDVEEDVSIVEEI--QELLQEMKKE---QQSGGGRNRRRVARGMGSGKYRMLKM 190

Query: 838  RQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQ 1017
            RQVKIETEAWE+AA EY+ELL DMCEQKLAPNLPY+KSLFLGW+EP+ + IA+EQE  R 
Sbjct: 191  RQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRM 250

Query: 1018 GKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIH 1197
             K KVAY  Y   LPA+MMAVI MHKL+GL+MTGGEHG ARVVQAAC+IGDA+EQEVRIH
Sbjct: 251  AKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIH 310

Query: 1198 ------XXXXXXXXXXXXXAEGNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSK 1359
                                + + TVT +QE LRK VT+L+KKQKL AV++IVK QDD K
Sbjct: 311  KFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFK 370

Query: 1360 PWGQDTKAK 1386
            PWGQD +AK
Sbjct: 371  PWGQDARAK 379


>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
            gi|550340797|gb|ERP62048.1| hypothetical protein
            POPTR_0004s11060g [Populus trichocarpa]
          Length = 475

 Score =  300 bits (769), Expect = 7e-79
 Identities = 179/385 (46%), Positives = 227/385 (58%), Gaps = 12/385 (3%)
 Frame = +1

Query: 268  KIDHLIPLPIDKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFF 447
            KID LI    DKK +   L     ST+MWRN AKQ     L P   +  F  F RT SF 
Sbjct: 13   KIDPLIAF--DKKPSILSLINSKPSTVMWRNVAKQA---ILKPQSKSLNFPSFPRTHSFL 67

Query: 448  GFSQDSIFSQKFNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNIN 627
            G  Q+ IF +K  F  ++ +S      P+L   ++GE S   +++G+PS   +++  + N
Sbjct: 68   GAPQEPIFFEKSKFHSVNNSS------PQLCFRRIGEISTHEDYMGKPSFGFLRNGDSSN 121

Query: 628  A-----LCPKSYXXXXXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHK 792
                  LCP+ Y                        QELL + ++EE K+++   RRR  
Sbjct: 122  GNLCSGLCPRGYVSVAEAVSSTDVEDNVVVDEEL--QELLQDTRKEEEKEKDFRRRRRLH 179

Query: 793  MAHGMGRKKYLALRRRQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYE 972
               GMG  KY ALRRRQVKIE EAWEQAAKEYKELL DMCE KLAPNLPY+K LFLGW+E
Sbjct: 180  ANRGMGSGKYKALRRRQVKIEAEAWEQAAKEYKELLKDMCEHKLAPNLPYMKGLFLGWFE 239

Query: 973  PMCNKIAEEQESFRQGKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQA 1152
            P+ + IA+EQES R+GK++  Y  Y   LPA+MM+VI MHKL  ++M GGEHG ARVV A
Sbjct: 240  PLRDAIAKEQESIRRGKTRPDYSPYFDLLPADMMSVITMHKLTAMVMIGGEHGCARVVAA 299

Query: 1153 ACLIGDAVEQEVRIH------XXXXXXXXXXXXXAEGNT-TVTPQQENLRKTVTNLMKKQ 1311
            AC+IGDA+EQE+RIH                    EG +  V  ++E LRK VT+L+KKQ
Sbjct: 300  ACMIGDAIEQEIRIHNFLEKTRKKKENADNSKNSVEGESPAVMNEEEKLRKKVTDLIKKQ 359

Query: 1312 KLRAVQQIVKAQDDSKPWGQDTKAK 1386
            KL AV++IVK  DDSK W  D KAK
Sbjct: 360  KLPAVRKIVKGHDDSKSWSTDAKAK 384


>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  294 bits (753), Expect = 5e-77
 Identities = 166/360 (46%), Positives = 212/360 (58%), Gaps = 3/360 (0%)
 Frame = +1

Query: 316  FLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQKFNFKH 495
            F  NP  IST +WRN AKQ  SR     +F      F R  S  G  Q+S+F    NFK 
Sbjct: 25   FHKNPSMISTTVWRNFAKQAISRKQ---RFHINSQSFSRAYSLLGICQESVFPG--NFKP 79

Query: 496  LDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXXXXXXXX 675
             + +SCS+    E+     G  S+  + + +PS  S+++ +  N  CPK Y         
Sbjct: 80   FELSSCSSLRFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAEAVSS 139

Query: 676  XXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRRQVKIE 855
                           QELL +M  EE ++     R R   A GMG+ KY  L+RRQ+KIE
Sbjct: 140  TDVEEEVSVVDEV--QELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIE 197

Query: 856  TEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQGKSKVA 1035
            TEAWE+AAKEY+EL+ DMCEQKLAPNLPY+KSLFLGW+EP+ N I +EQ+  R+GK+K A
Sbjct: 198  TEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKTA 257

Query: 1036 YGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIHXXXXXX 1215
            Y  Y+  LPA+MM+VI MHKL+GL+MTGGEHG  RVV AAC IG+A+EQEVRIH      
Sbjct: 258  YAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMT 317

Query: 1216 XXXXXXXAEGN---TTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPWGQDTKAK 1386
                    + N        ++E L K VTNLMKKQKL+AV+ IV   D SK W  + +AK
Sbjct: 318  RKKKVDKDQENGESDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAK 377


>ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Populus trichocarpa]
            gi|550320354|gb|ERP51329.1| hypothetical protein
            POPTR_0017s14590g [Populus trichocarpa]
          Length = 987

 Score =  288 bits (738), Expect = 3e-75
 Identities = 168/358 (46%), Positives = 211/358 (58%), Gaps = 12/358 (3%)
 Frame = +1

Query: 349  MWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQKFNFKHLDFNSCSNFGC 528
            MWRN AKQ    TL     +  F  F RT SF G S++ IF +K  F  L+  S      
Sbjct: 1    MWRNVAKQA---TLKSQSKSLNFPSFPRTYSFLGASKEPIFFEKLKFHSLNNTS------ 51

Query: 529  PELDAWKVGEFSARNEFLGRPSLHSMKSQVNINA-----LCPKSYXXXXXXXXXXXXXXX 693
            P L    +GE S   +F+G+P    +++  + N       CP+ Y               
Sbjct: 52   PRLSFRAIGEISTHEDFMGKPRFIFLRNSDSTNGNRCAGFCPRGYVSVVEAVSSTDVEDN 111

Query: 694  XXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRRQVKIETEAWEQ 873
                     QELL EM++EE K+ +  +RRR     G+G +K+  LRRRQVKIE EAWE 
Sbjct: 112  VYGADEV--QELLPEMRKEEEKEEH--FRRRLHANPGIGSRKHRVLRRRQVKIEAEAWEL 167

Query: 874  AAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQGKSKVAYGKYLL 1053
            A KEYKELL DMCE KLAPNLPY+KSLFLGW+EP  + IA+EQE  R GKS+  Y  Y  
Sbjct: 168  ATKEYKELLKDMCEHKLAPNLPYMKSLFLGWFEPFTDAIAKEQELIRTGKSRQGYAPYFD 227

Query: 1054 DLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIH------XXXXXX 1215
             LPA+ M+VIAMH+L  ++MTGGEHG ARVV AAC+IGDA+EQE+RIH            
Sbjct: 228  LLPADKMSVIAMHQLAAMVMTGGEHGCARVVTAACMIGDAIEQEIRIHNILEKTRKKKEK 287

Query: 1216 XXXXXXXAEGNT-TVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPWGQDTKAK 1386
                    EG +  V  +QENLRK VT+L+KKQKL AV++IVK +DDSKPW  D +AK
Sbjct: 288  ANDSKNGVEGESPAVMEEQENLRKKVTDLIKKQKLPAVRKIVKGKDDSKPWNADARAK 345


>emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 1036

 Score =  288 bits (736), Expect = 5e-75
 Identities = 163/375 (43%), Positives = 214/375 (57%), Gaps = 9/375 (2%)
 Frame = +1

Query: 289  LPIDKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSI 468
            + I K  + FL+NP   STIMWRN AKQ  SRT  P      FS   R+ SF G + D  
Sbjct: 21   IQIYKSRSNFLINPCFDSTIMWRNFAKQAISRT--PNLCLRKFS-ISRSYSFLGGTHDCG 77

Query: 469  FSQKFNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSY 648
            FS +  F+  +   C N    E+   + G    +     RP    + +++N N +CPK Y
Sbjct: 78   FSDRLKFRPFELGFCKNRSFSEVGFCREGGSLVKEGIGERPVSGCLGNRLNFNVVCPKGY 137

Query: 649  XXXXXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRH----KMAHGMGRK 816
                                    QEL+ EM++EE + +   WR  H    KM  GM   
Sbjct: 138  ASVVEAEVDSSTDLEDDVSVFDEIQELVEEMRKEEKRAK---WRESHQRQQKMVAGMPLY 194

Query: 817  KYLALRRRQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAE 996
            KY  LR RQ+K+ETE+W+QAA EYKELL DMC+ KLAPNLPY+KSLFLGW+EP  + I E
Sbjct: 195  KYQKLRNRQIKLETESWQQAANEYKELLADMCKLKLAPNLPYVKSLFLGWFEPFRDSIIE 254

Query: 997  EQESFRQGKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAV 1176
            +QE  RQGK + AYG Y   LPA+MMA+I MHKL+G++MTG  HG  +VVQAAC +G+A+
Sbjct: 255  DQELIRQGKCRGAYGTYFDQLPADMMAIITMHKLMGMLMTGSGHGSVKVVQAACALGEAI 314

Query: 1177 EQEVRIHXXXXXXXXXXXXXAE-----GNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVK 1341
            EQEVRIH             ++      +     +Q++LRK V NL+KKQK R   +IV 
Sbjct: 315  EQEVRIHTFLEKAKKKKGDRSKKPDDAASDAEIQEQQHLRKNVNNLIKKQKRRQALKIVD 374

Query: 1342 AQDDSKPWGQDTKAK 1386
            +Q D KPWG +T+AK
Sbjct: 375  SQGDLKPWGSETRAK 389


>gb|ABD96891.1| hypothetical protein [Cleome spinosa]
          Length = 1021

 Score =  282 bits (722), Expect = 2e-73
 Identities = 165/389 (42%), Positives = 227/389 (58%), Gaps = 6/389 (1%)
 Frame = +1

Query: 238  PELSLLSAGIKIDHLIPLPIDKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTF 417
            P + L S     DHL+PL     +++   NP   S+ MWRN AKQ  SR+  P++ +   
Sbjct: 6    PTVILASPTRFFDHLVPLDKPLISSR---NPVVQSSAMWRNIAKQTISRS--PVRLSV-- 58

Query: 418  SPFCRTC-SFFGFSQDSIFSQKFNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPS 594
               CR      GFS +SIF + F F+       S+ G  ++   +  E  A  +F GRP 
Sbjct: 59   ---CRQSRGLLGFSSESIFPEIFIFRPSVIGPISSSGFHDMGYSRTCEIPAPGDFSGRPG 115

Query: 595  LHSMKSQVNINALCPKSYXXXXXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNIL 774
               +K +   +   P+SY                        QELL EMK+EE K++  L
Sbjct: 116  FGFLKDECCFHRFSPRSYVNAAEAVSSTDIEEDASVVDEV--QELLREMKKEEKKEKVHL 173

Query: 775  WRRRHKMAHGMGRKKYLALRRRQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSL 954
             R + +   GM  KKY +L+RRQVKIETEAWE+AA EYKELL DMCEQKLAPNLPY+KSL
Sbjct: 174  RRVKRQEDLGMLEKKYQSLKRRQVKIETEAWEKAANEYKELLTDMCEQKLAPNLPYVKSL 233

Query: 955  FLGWYEPMCNKIAEEQESFRQGKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGI 1134
            FLGW+EP+   IA++QE +R GK++  Y  Y+  LPA+M+AVI MHKL+GL+MTGG++G 
Sbjct: 234  FLGWFEPLREAIAKDQELYRLGKNRANYAYYIDQLPADMIAVITMHKLMGLLMTGGDNGC 293

Query: 1135 ARVVQAACLIGDAVEQEVRIHXXXXXXXXXXXXXAEG-----NTTVTPQQENLRKTVTNL 1299
             +V+ AAC +GDA+EQE+RI              +EG       T   +++ L++ V+ L
Sbjct: 294  VKVIMAACTVGDAIEQEIRICRFLEKTKKKKENISEGVENVEKETTVKEEDWLKRKVSEL 353

Query: 1300 MKKQKLRAVQQIVKAQDDSKPWGQDTKAK 1386
            +KKQKL AV+QI+ + D SKPW  D +AK
Sbjct: 354  IKKQKLPAVRQILNSHDASKPWSTDVRAK 382


>ref|XP_002533596.1| conserved hypothetical protein [Ricinus communis]
            gi|223526525|gb|EEF28787.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 395

 Score =  279 bits (713), Expect = 2e-72
 Identities = 167/365 (45%), Positives = 211/365 (57%), Gaps = 19/365 (5%)
 Frame = +1

Query: 349  MWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGFSQDSIFSQKFNFKHLDFNSCSNFGC 528
            MWRN AKQ  SR  +    + +  P   T SF G SQ+  F+ K     L       + C
Sbjct: 1    MWRNVAKQTISRAQSK---SLSSHPLSSTYSFLGLSQEPSFTDKCKLSPL-------YAC 50

Query: 529  PELDAW-KVGEFSARNEFLGRPSLHSMKSQVNINA---------LC----PKSYXXXXXX 666
              L  + ++GE     +F+G+P    + ++ N N+         LC    P+ Y      
Sbjct: 51   SSLVGFCRLGEIVPYEDFMGKPGFGLVGNKDNSNSSHMSMCNGYLCSGFYPRGY-VSVAE 109

Query: 667  XXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRRQV 846
                              QELL EM+REE +++ ++ R+      GMG KKY  L++RQV
Sbjct: 110  AVSSSTDVEEDVSVVEEVQELLQEMRREEAREKELIRRKE----RGMGSKKYQMLKKRQV 165

Query: 847  KIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQGKS 1026
            KIETEAWE A KEYKELL DMCE+KLAPNLPY+KSLFLGW+EP  + I +EQE  R GK+
Sbjct: 166  KIETEAWEWAVKEYKELLMDMCEKKLAPNLPYMKSLFLGWFEPFRDAILKEQELIRVGKN 225

Query: 1027 KVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIHXXX 1206
            + A+  Y   LPA+MMAVI MHKLV L+MTGGEHG ARVV AACLIG A+EQEVRIH   
Sbjct: 226  RTAFAPYFDQLPADMMAVITMHKLVALVMTGGEHGCARVVAAACLIGAAIEQEVRIHKFL 285

Query: 1207 XXXXXXXXXXAEGN-----TTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPWGQ 1371
                      ++ N          +QE LRK VT+L+KKQKL AV+QIVK  DDS+ W Q
Sbjct: 286  EKTKKRNSNDSKKNEEDESNGAVKEQEKLRKKVTDLIKKQKLPAVRQIVKGHDDSQSWTQ 345

Query: 1372 DTKAK 1386
            DTKAK
Sbjct: 346  DTKAK 350


>ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutrema salsugineum]
            gi|557101180|gb|ESQ41543.1| hypothetical protein
            EUTSA_v10012544mg [Eutrema salsugineum]
          Length = 1030

 Score =  263 bits (672), Expect = 1e-67
 Identities = 160/376 (42%), Positives = 209/376 (55%), Gaps = 5/376 (1%)
 Frame = +1

Query: 274  DHLIPLPIDKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGF 453
            DHLIP     K      NP   S  MWR+ AKQ  SR+      A   +   +T  F   
Sbjct: 18   DHLIPF---HKPLISCRNPVPQSFPMWRSIAKQAISRSQ-----AARLAVGSQTRGFLAS 69

Query: 454  SQDSIFSQKFNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINAL 633
            SQ+S  S+K  F+   F S S+ GC E+   ++   +   E  GR  L   K+    N  
Sbjct: 70   SQESSLSKKLRFRCSVFGSFSDSGCHEMGFSRLSGVTRPEELPGRVGLRFSKNDSYFNGS 129

Query: 634  CPKSYXXXXXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGR 813
              + Y                        QELL EMK+E+ ++ +  WR + +   GMGR
Sbjct: 130  FARRYTSVAEEISSTDVEEEPSVVDEV--QELLKEMKKEQKREDHRSWRMKKQEHVGMGR 187

Query: 814  KKYLALRRRQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIA 993
             KY  L RRQVKIETE WE+AA EY+ELL DMCE+KLAPNLPY+KSL L W+EP+ + IA
Sbjct: 188  GKYRNLWRRQVKIETEEWERAANEYRELLTDMCEKKLAPNLPYVKSLLLDWFEPVRDVIA 247

Query: 994  EEQESFRQGKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDA 1173
            ++QE +R GKSK  Y  YL  LPA+ +AVI MHKLVG +MTGG++G  +VV AAC +GDA
Sbjct: 248  KDQELYRLGKSKATYAHYLDQLPADKIAVITMHKLVGHLMTGGDNGCVKVVHAACSVGDA 307

Query: 1174 VEQEVRIHXXXXXXXXXXXXXAE-----GNTTVTPQQENLRKTVTNLMKKQKLRAVQQIV 1338
            +EQEVRI               E      N T   +Q+ LRK V  L+KKQKL AV++I+
Sbjct: 308  IEQEVRICTFLGKTTKKKGDDNEESGEVENGTAVKEQDKLRKKVNELIKKQKLSAVRKIL 367

Query: 1339 KAQDDSKPWGQDTKAK 1386
            ++ D +KPW  D +AK
Sbjct: 368  QSYDYTKPWTADARAK 383


>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 1262

 Score =  263 bits (671), Expect = 2e-67
 Identities = 163/363 (44%), Positives = 204/363 (56%), Gaps = 9/363 (2%)
 Frame = +1

Query: 325  NPPDISTIMWRNAAKQVSSRTLT-PIKFATTFSPFCRTCSFFGFSQDSIFSQKFNFKH-L 498
            NP  IST ++R+  KQ  SRT   P+K               GF Q S F     F+H +
Sbjct: 291  NPSMISTTVFRSLTKQAISRTQRLPLK------------PLLGFCQRSDF-----FQHPI 333

Query: 499  DFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINALCPKSYXXXXXXXXXX 678
              +SCS           VG  S + + + RPS          +  CPK Y          
Sbjct: 334  LVSSCSTL---------VG--SCQIDHMQRPSF-------GFSDFCPKGYASVAEAISST 375

Query: 679  XXXXXXXXXXXXXX----QELLTEMKREEVKQRNILWRRRHKMAHGMGRKKYLALRRRQV 846
                              QE+L EMK+E+ +Q    WR       GMG  KYL LRRRQ+
Sbjct: 376  DASSSTDAEEEVCVVDELQEILKEMKKEDKRQSAYRWRIEQARVRGMGEGKYLMLRRRQI 435

Query: 847  KIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIAEEQESFRQGKS 1026
            KIETEAWE+AA EY+ELL DMCEQKLAPNLPY+KSLFLGW+EP+CN I +EQ+  RQGK+
Sbjct: 436  KIETEAWERAADEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLCNAITKEQDLCRQGKN 495

Query: 1027 KVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDAVEQEVRIHXXX 1206
            K AYG Y+  LPA+MMAVI MHKL+GL+MT GEHG  RVV AAC IG+A+EQEV+IH   
Sbjct: 496  KTAYGPYMDKLPADMMAVITMHKLMGLLMT-GEHGSCRVVSAACTIGEAIEQEVKIHNFL 554

Query: 1207 XXXXXXXXXXAE---GNTTVTPQQENLRKTVTNLMKKQKLRAVQQIVKAQDDSKPWGQDT 1377
                       +    +     + E L K VTNL++K+KL+AV+ IV+  DDSK W Q+ 
Sbjct: 555  ERTKKKKVGKDQETGESDAAMKENEKLNKKVTNLIEKKKLQAVRHIVRGHDDSKAWSQEA 614

Query: 1378 KAK 1386
            KAK
Sbjct: 615  KAK 617


>ref|XP_006289882.1| hypothetical protein CARUB_v10003497mg [Capsella rubella]
            gi|482558588|gb|EOA22780.1| hypothetical protein
            CARUB_v10003497mg [Capsella rubella]
          Length = 1014

 Score =  258 bits (660), Expect = 3e-66
 Identities = 155/376 (41%), Positives = 207/376 (55%), Gaps = 5/376 (1%)
 Frame = +1

Query: 274  DHLIPLPIDKKATKFLLNPPDISTIMWRNAAKQVSSRTLTPIKFATTFSPFCRTCSFFGF 453
            DHLIPL    K      NP   S  MWRN AKQ   R+   +   +            G 
Sbjct: 18   DHLIPL---HKPLISSPNPVSQSFPMWRNIAKQAILRSAARLNVGS---------HTLGI 65

Query: 454  SQDSIFSQKFNFKHLDFNSCSNFGCPELDAWKVGEFSARNEFLGRPSLHSMKSQVNINAL 633
            SQ+S+FS+  +F+     S S   C E+    +   + R EF          ++  +N  
Sbjct: 66   SQESVFSKNLSFRCSVLGSISGSPCHEMGVRHLSGITRREEFFN--------NERGLNGT 117

Query: 634  CPKSYXXXXXXXXXXXXXXXXXXXXXXXXQELLTEMKREEVKQRNILWRRRHKMAHGMGR 813
              + +                         ELL EMK+E+ ++ +  WR + +   GMGR
Sbjct: 118  LARGFTSVAEEVLSTDVEEEPEV------DELLKEMKKEKKRESHRSWRMKKQEHLGMGR 171

Query: 814  KKYLALRRRQVKIETEAWEQAAKEYKELLNDMCEQKLAPNLPYIKSLFLGWYEPMCNKIA 993
             K+  L RRQVKIETE WE+AA EY+ELL DMCE+KLAPNLPY+KSLFLGW+EP+ + IA
Sbjct: 172  TKFQNLWRRQVKIETEEWERAAAEYRELLTDMCERKLAPNLPYVKSLFLGWFEPLRDAIA 231

Query: 994  EEQESFRQGKSKVAYGKYLLDLPAEMMAVIAMHKLVGLIMTGGEHGIARVVQAACLIGDA 1173
            +EQE +  GKSK  Y  YL  LPA+M+AVI MHKL+G +MTGGE+G  +VVQAAC +GDA
Sbjct: 232  KEQEMYSLGKSKATYAHYLDQLPADMIAVITMHKLMGHLMTGGENGCIKVVQAACTVGDA 291

Query: 1174 VEQEVRIHXXXXXXXXXXXXXAE-----GNTTVTPQQENLRKTVTNLMKKQKLRAVQQIV 1338
            +EQE+RI               E      N T   +Q+ LRK V  L+KKQKL AV++I+
Sbjct: 292  IEQEIRICTFLDKTRKKKGDDNEESGEVENGTAMKEQDKLRKMVNELIKKQKLSAVRKIL 351

Query: 1339 KAQDDSKPWGQDTKAK 1386
            ++ D +KPW  D +AK
Sbjct: 352  QSHDYTKPWIADVRAK 367