BLASTX nr result
ID: Rauwolfia21_contig00032457
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00032457
(1500 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 532 e-148
emb|CBI18448.3| unnamed protein product [Vitis vinifera] 523 e-145
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr... 511 e-142
ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citr... 511 e-142
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit... 509 e-142
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit... 509 e-141
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ... 509 e-141
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 505 e-140
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 504 e-140
ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 504 e-140
gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus pe... 503 e-140
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [... 503 e-140
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit... 501 e-139
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu... 501 e-139
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 499 e-138
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc... 496 e-137
dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana] 495 e-137
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab... 495 e-137
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian... 495 e-137
ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutr... 494 e-137
>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
vinifera]
Length = 479
Score = 532 bits (1371), Expect = e-148
Identities = 254/325 (78%), Positives = 289/325 (88%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKRFD IPSGTL+PNADEIEYL+RLV YKD +I++LNKPPK+P+KGN+PVHNSMD
Sbjct: 155 ISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPAILVLNKPPKVPLKGNLPVHNSMDALAA 214
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
L++DY+EGPKLVHRLDRESSGLLLMGRT ES+++LH LFSDINKAKSLS+AW ACEA
Sbjct: 215 AALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDACEA 274
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
T Q+YWALVIG PK+KEG++ APLSKVLLDDGKTERVILA+ SGLEASQEAITEYRVLGP
Sbjct: 275 TCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVLGP 334
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
MINGCSWIELCP TSRKHQLR+HCAEALGTPIVGD+KYGWFVHR+WKQMPR+DLEP + +
Sbjct: 335 MINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTTGK 394
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+M+RPEGLDVQKGSVLSKVPL+HLH RE++LPN+ KFL K + PK KP
Sbjct: 395 PYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSLKP 454
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 455 DILRFVASMPNHMKISWNLMSSYLV 479
>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 523 bits (1346), Expect = e-145
Identities = 252/327 (77%), Positives = 288/327 (88%), Gaps = 2/327 (0%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYK--DSSIILLNKPPKLPVKGNVPVHNSMDXX 1322
ISKRFD IPSGTL+PNADEIEYL+RL + K D +I++LNKPPK+P+KGN+PVHNSMD
Sbjct: 155 ISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQDPAILVLNKPPKVPLKGNLPVHNSMDAL 214
Query: 1321 XXXXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAAC 1142
L++DY+EGPKLVHRLDRESSGLLLMGRT ES+++LH LFSDINKAKSLS+AW AC
Sbjct: 215 AAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFSDINKAKSLSKAWDDAC 274
Query: 1141 EATYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVL 962
EAT Q+YWALVIG PK+KEG++ APLSKVLLDDGKTERVILA+ SGLEASQEAITEYRVL
Sbjct: 275 EATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGKTERVILANQSGLEASQEAITEYRVL 334
Query: 961 GPMINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNS 782
GPMINGCSWIELCP TSRKHQLR+HCAEALGTPIVGD+KYGWFVHR+WKQMPR+DLEP +
Sbjct: 335 GPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDLEPTT 394
Query: 781 REPYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGS 602
+PY+M+RPEGLDVQKGSVLSKVPL+HLH RE++LPN+ KFL K + PK
Sbjct: 395 GKPYKMRRPEGLDVQKGSVLSKVPLLHLHCRELILPNIAKFLPILDPKPKNQNQYPKLSL 454
Query: 601 KPDVLRFVASMPSHMKISWNLMSSYLV 521
KPD+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 455 KPDILRFVASMPNHMKISWNLMSSYLV 481
>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
gi|557538602|gb|ESR49646.1| hypothetical protein
CICLE_v10031422mg [Citrus clementina]
Length = 471
Score = 511 bits (1317), Expect = e-142
Identities = 247/326 (75%), Positives = 284/326 (87%), Gaps = 1/326 (0%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D IPSGTL PNADEI+YLRRLV Y+DS+I++LNKPPK+P+KG++PVHNSMD
Sbjct: 146 ISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILVLNKPPKVPLKGHLPVHNSMDALAA 205
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYDY+EGPKLVHRLDRESSGLLLMGRT ES+S L LFSD+NK+KSLS+AW+ ACEA
Sbjct: 206 AALSYDYNEGPKLVHRLDRESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACEA 265
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
YQ+YWALVIG PKEK+G++ APLSKVLLDDGKTER+ILA SGLEASQEA+TEYRVLGP
Sbjct: 266 MYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGP 325
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
MINGCSWIEL P T RKHQLR+HCAEALGTPIVGD+KYGWFVHR+WKQMPR+D+EP S +
Sbjct: 326 MINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGK 385
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRP-LPKEGSK 599
PY+++RP+GLDVQKGSVLSKVPL+HLH RE+VLPN+ KF K D P L +
Sbjct: 386 PYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDNLFPTLSSKPDG 445
Query: 598 PDVLRFVASMPSHMKISWNLMSSYLV 521
PD+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 446 PDLLRFVASMPSHMKISWNLMSSYLV 471
>ref|XP_006436405.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
gi|557538601|gb|ESR49645.1| hypothetical protein
CICLE_v10031422mg [Citrus clementina]
Length = 343
Score = 511 bits (1317), Expect = e-142
Identities = 247/326 (75%), Positives = 284/326 (87%), Gaps = 1/326 (0%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D IPSGTL PNADEI+YLRRLV Y+DS+I++LNKPPK+P+KG++PVHNSMD
Sbjct: 18 ISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILVLNKPPKVPLKGHLPVHNSMDALAA 77
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYDY+EGPKLVHRLDRESSGLLLMGRT ES+S L LFSD+NK+KSLS+AW+ ACEA
Sbjct: 78 AALSYDYNEGPKLVHRLDRESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACEA 137
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
YQ+YWALVIG PKEK+G++ APLSKVLLDDGKTER+ILA SGLEASQEA+TEYRVLGP
Sbjct: 138 MYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQNSGLEASQEAVTEYRVLGP 197
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
MINGCSWIEL P T RKHQLR+HCAEALGTPIVGD+KYGWFVHR+WKQMPR+D+EP S +
Sbjct: 198 MINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGK 257
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRP-LPKEGSK 599
PY+++RP+GLDVQKGSVLSKVPL+HLH RE+VLPN+ KF K D P L +
Sbjct: 258 PYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFRNVLNQKSDNLFPTLSSKPDG 317
Query: 598 PDVLRFVASMPSHMKISWNLMSSYLV 521
PD+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 318 PDLLRFVASMPSHMKISWNLMSSYLV 343
>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
sinensis]
Length = 471
Score = 509 bits (1312), Expect = e-142
Identities = 246/326 (75%), Positives = 284/326 (87%), Gaps = 1/326 (0%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D IPSGTL PNADEI+YLRRLV Y+DS+I++LNKPPK+P+KGN+PVHNSMD
Sbjct: 146 ISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILVLNKPPKVPLKGNLPVHNSMDALAA 205
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYD +EGPKLVHRLDRESSGLLLMGRT ES+S L LFSD+NK+KSLS+AW+ ACEA
Sbjct: 206 AALSYDNNEGPKLVHRLDRESSGLLLMGRTKESVSLLTWLFSDVNKSKSLSKAWNDACEA 265
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
YQ+YWALVIG P+EK+G++ APLSKVLLDDGKTER+ILA SGLEASQEA+TEYRVLGP
Sbjct: 266 MYQRYWALVIGSPREKQGIIRAPLSKVLLDDGKTERIILAQNSGLEASQEAMTEYRVLGP 325
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
MINGCSWIEL P T RKHQLR+HCAEALGTPIVGD+KYGWFVHR+WKQMPR+D+EP S +
Sbjct: 326 MINGCSWIELRPLTCRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTSGK 385
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRP-LPKEGSK 599
PY+++RP+GLDVQKGSVLSKVPL+HLH RE+VLPN+ KF+ K D P L +
Sbjct: 386 PYKLRRPDGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFINVLNQKSDNLFPTLSSKPDG 445
Query: 598 PDVLRFVASMPSHMKISWNLMSSYLV 521
PD+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 446 PDLLRFVASMPSHMKISWNLMSSYLV 471
>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
PREDICTED: RNA pseudouridine synthase 3,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
pseudouridine synthase 3, mitochondrial-like isoform X3
[Solanum tuberosum]
Length = 475
Score = 509 bits (1311), Expect = e-141
Identities = 243/325 (74%), Positives = 284/325 (87%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D+IPSGTLYPNADEI YL+RLV YKD +I++LNKPPKLP+KGN+PVHNSMD
Sbjct: 154 ISKRYDVIPSGTLYPNADEIAYLQRLVFYKDPAILVLNKPPKLPLKGNLPVHNSMDALAA 213
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSY+YDEGP+LVHRLDRESSGL LMGRT ESIS+LHLLFS+ K+KSLS+AW+ AC +
Sbjct: 214 AALSYEYDEGPRLVHRLDRESSGLHLMGRTEESISHLHLLFSNTKKSKSLSKAWNDACGS 273
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
TYQ+YWALVIG PKEKEG++ APL+KVLLDDG+TERV+LA SGLEAS EA+TEYR+LGP
Sbjct: 274 TYQRYWALVIGSPKEKEGVISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVTEYRLLGP 333
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
MINGCSWIEL PHTSRKHQ+R+HCAEALGTPIVGD+KYGWFVHRKWKQMPR+D+EP + +
Sbjct: 334 MINGCSWIELRPHTSRKHQIRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVDVEPTTGK 393
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PYR++RPEGLDVQKGSVLSKVPL+HLH RE+VLPN+ KF+E H+ K + SKP
Sbjct: 394 PYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRK---TKKHSDYSSKP 450
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVA MPS MKISW LMSS L+
Sbjct: 451 DLLRFVAPMPSPMKISWKLMSSCLI 475
>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 471
Score = 509 bits (1310), Expect = e-141
Identities = 244/325 (75%), Positives = 280/325 (86%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKRFD IPSGTLYPN DEI+YL+RLV YKD +I++LNKPPKLPVKG++PVHNSMD
Sbjct: 149 ISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDYAILVLNKPPKLPVKGSLPVHNSMDALAA 208
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYD+DEGPKLVHRLDRESSGLLLMGRT ES+++LH LF+D+N KS +AW+ AC+
Sbjct: 209 AALSYDHDEGPKLVHRLDRESSGLLLMGRTKESVAHLHWLFNDLNTVKSSCKAWNDACDV 268
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
YQ++WALVIG PKEKEGL+CAPLSK+LLDDGKTERVILA GLEASQEAITEYRVLGP
Sbjct: 269 KYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTERVILAQNVGLEASQEAITEYRVLGP 328
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
MINGCSWIEL P TSRKHQLR+HCAEALGTPIVGD+KYGWFVHR+WKQMPR+D+EP + +
Sbjct: 329 MINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPTTGK 388
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+++RPEGLDVQKGSVLSKVPL+HLH RE+VLPN+ KFL +T P KP
Sbjct: 389 PYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLPVLNKNTETLP--PALSMKP 446
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVA+MP HMKISWNLMSSYLV
Sbjct: 447 DLLRFVATMPKHMKISWNLMSSYLV 471
>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 505 bits (1300), Expect = e-140
Identities = 243/325 (74%), Positives = 276/325 (84%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
+++RFD IPSGTLYPNADEI+YL+RLV YKDS+II+LNKPPKLPVKG +PVHNSMD
Sbjct: 150 VARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGTLPVHNSMDALAD 209
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYDYD+GPKLVHRLDRESSG+LLMGRT ES+ +L LFS+I AK +AW AC A
Sbjct: 210 AALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACNA 269
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
TYQKYWALVIGCP+E+EG++ APLSKVLLDDGKTERVILA+ + +EASQEAITEYRVLGP
Sbjct: 270 TYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERVILANKASIEASQEAITEYRVLGP 329
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSWIELCP TSRKHQLRIHCAEALGTPIVGD+KYGWFVHR+WKQMPR+D+EP S
Sbjct: 330 TINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDVEPISGR 389
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+++RPEGLDVQKGSVLSKVPL+HLH RE+VLPN+ KFL K R P
Sbjct: 390 PYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGPNR---PVSSFDS 446
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 447 DLLRFVARMPSHMRISWNLMSSYLV 471
>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
sativus]
Length = 471
Score = 504 bits (1299), Expect = e-140
Identities = 242/325 (74%), Positives = 276/325 (84%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
+++RFD IPSGTLYPNADEI+YL+RLV YKDS+II+LNKPPKLPVKG +PVHNSMD
Sbjct: 150 VARRFDTIPSGTLYPNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGTLPVHNSMDALAD 209
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYDYD+GPKLVHRLDRESSG+LLMGRT ES+ +L LFS+I AK +AW AC A
Sbjct: 210 AALSYDYDDGPKLVHRLDRESSGILLMGRTKESVDHLQWLFSNIRNAKFTCKAWEEACNA 269
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
TYQKYWALVIGCP+E+EG++ APLSKVLLDDGKTERV+LA+ + +EASQEAITEYRVLGP
Sbjct: 270 TYQKYWALVIGCPREREGVISAPLSKVLLDDGKTERVVLANKASIEASQEAITEYRVLGP 329
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSWIELCP TSRKHQLRIHCAEALGTPIVGD+KYGWFVHR+WKQMPR+D+EP S
Sbjct: 330 TINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDVEPISGR 389
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+++RPEGLDVQKGSVLSKVPL+HLH RE+VLPN+ KFL K R P
Sbjct: 390 PYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLNVFYGKGPNR---PVSSFDS 446
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVA MPSHM+ISWNLMSSYLV
Sbjct: 447 DLLRFVARMPSHMRISWNLMSSYLV 471
>ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Solanum
lycopersicum]
Length = 475
Score = 504 bits (1297), Expect = e-140
Identities = 243/325 (74%), Positives = 282/325 (86%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D+IPSGTLYPNADEI YL+RLV YKD +I++LNKPPKLPVKGN+ VHNSMD
Sbjct: 154 ISKRYDVIPSGTLYPNADEIAYLQRLVFYKDPAILVLNKPPKLPVKGNLHVHNSMDALAA 213
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSY+YDEGP+LVHRLDRESSGL LMGRT ESIS+LHLLFS+ ++KSLS+AW+ AC +
Sbjct: 214 AALSYEYDEGPRLVHRLDRESSGLHLMGRTEESISHLHLLFSNTKRSKSLSKAWNDACGS 273
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
TYQ+YWALVIG PK KEG++ APL+KVLLDDG+TERV+LA SGLEAS EA+TEYR+LGP
Sbjct: 274 TYQRYWALVIGSPKVKEGVISAPLTKVLLDDGRTERVMLAQQSGLEASDEAVTEYRLLGP 333
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
MINGCSWIEL PHTSRKHQLR+HCAEALGTPIVGD+KYGWFVHRKWKQMPR+D+EP + +
Sbjct: 334 MINGCSWIELRPHTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRKWKQMPRVDVEPITGK 393
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PYR++RPEGLDVQKGSVLSKVPL+HLH RE+VLPN+ KF+E H+ K R SKP
Sbjct: 394 PYRLKRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFIELHSRK---TRKNTDYSSKP 450
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVA MPS MKISW LMSS L+
Sbjct: 451 DLLRFVAPMPSPMKISWKLMSSCLI 475
>gb|EMJ11188.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
Length = 471
Score = 503 bits (1296), Expect = e-140
Identities = 246/325 (75%), Positives = 277/325 (85%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
+S+RFD IPSGTLYPNADEIEY++R V YKDS+II+LNKPPKLPVKGN+PVHNSMD
Sbjct: 149 VSRRFDCIPSGTLYPNADEIEYMQRRVKYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAA 208
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSY ++GPKLVHRLDRESSGL LMGRT ES+S L L++D NK KS +AW ACEA
Sbjct: 209 AALSYGNNKGPKLVHRLDRESSGLHLMGRTKESVSLLQWLYTDFNKGKSSCQAWDDACEA 268
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
YQ+YWALVIG PKEKEGL+CAPLSKVLLD+GKTERVILAH SGLEASQ+AIT+YRVLGP
Sbjct: 269 RYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTERVILAHQSGLEASQKAITQYRVLGP 328
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSWIEL P TSRKHQLR+HCAEALGTPIVGD+KYGWFVHR+WKQMP +D+EP S
Sbjct: 329 TINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHVDVEPTSGL 388
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+++RP GLDVQKGSVLSKVPL+HLH RE+VLPN+ KFL K D+ P SKP
Sbjct: 389 PYKLRRPAGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFLLILDQKLDSLH--PAVSSKP 446
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 447 DILRFVASMPSHMKISWNLMSSYLV 471
>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 468
Score = 503 bits (1296), Expect = e-140
Identities = 246/325 (75%), Positives = 280/325 (86%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKRFD IPSGTLYPNADEI+YL+RLV YKDS+II+LNKPP+LPVKGN+P+HNSMD
Sbjct: 146 ISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAIIVLNKPPRLPVKGNLPLHNSMDALAA 205
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYDYDEGPKLV RLDRESSGLLLMGRT ESI +L LFSD+NK+ S +AW+ AC+A
Sbjct: 206 AALSYDYDEGPKLVQRLDRESSGLLLMGRTKESIDHLQWLFSDVNKSNSRCKAWNDACKA 265
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
TYQ+YWALVIG PKEKEGL+ APLSKVLL+DGKTERV+LA SGLEASQEA+TEYRVLGP
Sbjct: 266 TYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGKTERVVLAQHSGLEASQEALTEYRVLGP 325
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSWIEL P TSRKHQLR+HCAEALGTPIVGD+KYGW VH++WKQMPR+D+EP S +
Sbjct: 326 RINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWCVHQRWKQMPRVDIEPFSGK 385
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+++RP GLDVQKGSVLSKVPL+HLH RE VLPN+ KFL K + P +KP
Sbjct: 386 PYKLRRPAGLDVQKGSVLSKVPLLHLHCREFVLPNIAKFLAVLNEKSENIH--PALDAKP 443
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVASMP+HMKISWNLMSSYLV
Sbjct: 444 DLLRFVASMPTHMKISWNLMSSYLV 468
>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Glycine max]
Length = 476
Score = 501 bits (1290), Expect = e-139
Identities = 239/325 (73%), Positives = 282/325 (86%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D IPSGTLYPNADEI+YL+RLVIYKDS+II+LNKPPKLPVKG++PVHNSMD
Sbjct: 154 ISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVLNKPPKLPVKGSLPVHNSMDALAA 213
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYDYDEGPKLVHRLDRESSG+LL+GRT +S+S+L LFS+IN AKS + W+ ACEA
Sbjct: 214 AALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNAKSSCKDWNEACEA 273
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
TYQ+YWALVIG PKEKEG++ APLSKVLL+DGKTER+ILAH S +E QEA+TEYRVLGP
Sbjct: 274 TYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERIILAHHSSVEPRQEAVTEYRVLGP 333
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSW+EL P T RKHQLR+HCAEALGTPIVGD+KYGWFVH +WKQMPR+D+EP + +
Sbjct: 334 QINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGK 393
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+++RPEGLDVQKGSVLSKVPL+HLH RE+VLPN+ KF+ + + R +E +P
Sbjct: 394 PYKLRRPEGLDVQKGSVLSKVPLLHLHCRELVLPNIVKFMHVLNNSSEELRTSLRE--QP 451
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
DVLRFVA+MPSHM+ISWNLMSSYLV
Sbjct: 452 DVLRFVATMPSHMRISWNLMSSYLV 476
>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
gi|550341843|gb|ERP62872.1| hypothetical protein
POPTR_0004s23670g [Populus trichocarpa]
Length = 462
Score = 501 bits (1290), Expect = e-139
Identities = 241/325 (74%), Positives = 282/325 (86%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKRFD IPSGTLYPNADEIEYL+RLV YKDS++++LNKPPK+PVKGN+P+HNSMD
Sbjct: 140 ISKRFDTIPSGTLYPNADEIEYLQRLVKYKDSALLVLNKPPKVPVKGNMPIHNSMDALAA 199
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSY YDEGPKLVHRLDRESSGLLLMGRT ESI++L LLFS INKA+S AW+ ACEA
Sbjct: 200 AALSYGYDEGPKLVHRLDRESSGLLLMGRTKESIAHLQLLFSYINKAQSKCHAWNDACEA 259
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
TYQ+YWALVIG PK+KEGL+ A LSKVLLDDGKTERV+LA S LE S++A+TEYRVLGP
Sbjct: 260 TYQRYWALVIGSPKDKEGLISARLSKVLLDDGKTERVVLAQHSSLEPSRDAVTEYRVLGP 319
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSWIEL P TSRKHQLR+HCAEALGTPIVGD+KYGWFVHR+WKQMPR+D+EP+S +
Sbjct: 320 TINGCSWIELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPRVDIEPSSGK 379
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+++ PEG+D+QKGSVL+KVPL+HLH RE+VLPN+ KFL+ K + P ++P
Sbjct: 380 PYKLRWPEGVDIQKGSVLAKVPLLHLHCRELVLPNIAKFLDVLDGKSENVH--PALSTRP 437
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVASMPSHMKISWNLMSS+LV
Sbjct: 438 DLLRFVASMPSHMKISWNLMSSFLV 462
>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 469
Score = 499 bits (1284), Expect = e-138
Identities = 245/325 (75%), Positives = 276/325 (84%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
+S+RFD IPS TLYPNADEI+YL+RLV YKDS+II+LNKPPKLPVKGNVPVHNSMD
Sbjct: 147 VSRRFDCIPSETLYPNADEIDYLQRLVKYKDSAIIVLNKPPKLPVKGNVPVHNSMDALAA 206
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYDYDEGPKLVHRLDRESSG+LLMGRT ES+ L L++DIN KS AW+ AC A
Sbjct: 207 AALSYDYDEGPKLVHRLDRESSGILLMGRTKESLYLLQSLYTDINVGKSSCRAWNDACRA 266
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
Q+YWALVIG PKEKEGL+CAPL+KVLLDDGKTERVILAH SGLEASQ A+T+YRVLGP
Sbjct: 267 KCQRYWALVIGSPKEKEGLICAPLTKVLLDDGKTERVILAHQSGLEASQPALTQYRVLGP 326
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSWIEL P TSRKHQLR+HCAEALGTPIVGD+KYGWFVHR+WKQMP ID+EP +
Sbjct: 327 TINGCSWIELQPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHRRWKQMPHIDIEPATGL 386
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
Y+++RP GLDVQKGSV+SKVPL+HLH RE+VLPN+ KFL K D R + + SKP
Sbjct: 387 QYKLRRPAGLDVQKGSVVSKVPLLHLHCRELVLPNIAKFLCLLDQKLDNRYTV--DSSKP 444
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
DVLRFVASMP+HMKISWNLMSSYLV
Sbjct: 445 DVLRFVASMPTHMKISWNLMSSYLV 469
>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform X1
[Cicer arietinum]
Length = 479
Score = 496 bits (1276), Expect = e-137
Identities = 237/325 (72%), Positives = 281/325 (86%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKRFD IPSGTL PNADEI+YL+RLVIYKDS+II+LNKPPKLPVKGN+PVHNSMD
Sbjct: 157 ISKRFDPIPSGTLCPNADEIKYLQRLVIYKDSAIIMLNKPPKLPVKGNLPVHNSMDALAA 216
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LSYDYD+GPKLVHRLDRESSG+LL+GRT +S+S+L LFS+IN KS +AW+ ACE+
Sbjct: 217 AALSYDYDDGPKLVHRLDRESSGILLLGRTKDSVSHLQWLFSNINNTKSSCKAWNDACES 276
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
TYQ+YWALVIG PKEKEG++ APLSKVLL+DGKTERVILAH S +E QEA+TEYRVLGP
Sbjct: 277 TYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERVILAHESSIEPHQEAVTEYRVLGP 336
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSW+EL P T RKHQLR+HCAEALGTPIVGD+KYGWFVH +WKQMPR+D+EP + +
Sbjct: 337 KINGCSWVELRPLTYRKHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGK 396
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+++RPEGLDVQKGSVLSKVPL+HLH RE+ LPN+ KFL + + +++ P +P
Sbjct: 397 PYKLRRPEGLDVQKGSVLSKVPLLHLHCRELALPNIAKFL--NVLEKSSQQLDPSLSLQP 454
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
DVLRFVA+MP+HM+ISWNLMSSYLV
Sbjct: 455 DVLRFVATMPNHMRISWNLMSSYLV 479
>dbj|BAD43982.1| unnamed protein product [Arabidopsis thaliana]
Length = 326
Score = 495 bits (1274), Expect = e-137
Identities = 240/326 (73%), Positives = 276/326 (84%), Gaps = 1/326 (0%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D IPSGTLYPNADEI YL+RLV +KDS+II+LNKPPKLPVKGNVP+HNSMD
Sbjct: 3 ISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSMDALAA 62
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LS+ DEGP+LVHRLDRE+SGLL+MGRT ESI YLH +FSD S +AW+ ACEA
Sbjct: 63 AALSFGNDEGPRLVHRLDRETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEA 122
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
YQ+YWALVIG PKEKEGL+ APLSKVLLDDGKT+RV+LA GSG EASQ+AITEY+VLGP
Sbjct: 123 MYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGP 182
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSW+EL P TSRKHQLR+HCAEALGTPIVGD+KYGWFVH++WKQMP++D+EP + +
Sbjct: 183 KINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGK 242
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKE-GSK 599
PY+++RPEGLDVQKGSVLSKVPL+HLH RE+VLPN+ KFL H PL K
Sbjct: 243 PYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFL--HVMNQQETEPLHTGIIDK 300
Query: 598 PDVLRFVASMPSHMKISWNLMSSYLV 521
PD+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 301 PDLLRFVASMPSHMKISWNLMSSYLV 326
>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
Length = 477
Score = 495 bits (1274), Expect = e-137
Identities = 242/327 (74%), Positives = 278/327 (85%), Gaps = 2/327 (0%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D IPSGTLYPNADEI YL+RLV +KDS+II+LNKPPKLPVKGNVP+HNSMD
Sbjct: 154 ISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSMDALAA 213
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LS+ DEGP+LVHRLDRE+SGLL+MGR+ ESI YLH +FSD S +AW+ ACEA
Sbjct: 214 AALSFGKDEGPRLVHRLDRETSGLLVMGRSKESIHYLHSVFSDYKGRNSSCKAWNKACEA 273
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
YQ+YWALVIG PKEKEGL+ APLSKVLLDDGKT+RV+LA GSG EASQEAITEYRVLGP
Sbjct: 274 MYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQEAITEYRVLGP 333
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
MINGCSW+EL P TSRKHQLR+HCAEALGT IVGD+KYGWFVH++WKQMP++D+EP + +
Sbjct: 334 MINGCSWLELRPITSRKHQLRVHCAEALGTSIVGDYKYGWFVHKRWKQMPQVDIEPTTGK 393
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEG--S 602
PY+++RPEGLDVQKGSVLSKVPL+HLH RE+VLPN+ KFL H PL + G
Sbjct: 394 PYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFL--HVLNQQETEPL-RTGIID 450
Query: 601 KPDVLRFVASMPSHMKISWNLMSSYLV 521
KPD+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 451 KPDLLRFVASMPSHMKISWNLMSSYLV 477
>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
pseudouridine synthase 3, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 3; AltName:
Full=RNA-uridine isomerase 3; Flags: Precursor
gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
thaliana] gi|56790228|gb|AAW30031.1| At1g78910
[Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
pseudourine synthase 3 [Arabidopsis thaliana]
Length = 478
Score = 495 bits (1274), Expect = e-137
Identities = 240/326 (73%), Positives = 276/326 (84%), Gaps = 1/326 (0%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D IPSGTLYPNADEI YL+RLV +KDS+II+LNKPPKLPVKGNVP+HNSMD
Sbjct: 155 ISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSMDALAA 214
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LS+ DEGP+LVHRLDRE+SGLL+MGRT ESI YLH +FSD S +AW+ ACEA
Sbjct: 215 AALSFGNDEGPRLVHRLDRETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEA 274
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
YQ+YWALVIG PKEKEGL+ APLSKVLLDDGKT+RV+LA GSG EASQ+AITEY+VLGP
Sbjct: 275 MYQQYWALVIGSPKEKEGLISAPLSKVLLDDGKTDRVVLAQGSGFEASQDAITEYKVLGP 334
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
INGCSW+EL P TSRKHQLR+HCAEALGTPIVGD+KYGWFVH++WKQMP++D+EP + +
Sbjct: 335 KINGCSWVELRPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQVDIEPTTGK 394
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKE-GSK 599
PY+++RPEGLDVQKGSVLSKVPL+HLH RE+VLPN+ KFL H PL K
Sbjct: 395 PYKLRRPEGLDVQKGSVLSKVPLLHLHCREMVLPNIAKFL--HVMNQQETEPLHTGIIDK 452
Query: 598 PDVLRFVASMPSHMKISWNLMSSYLV 521
PD+LRFVASMPSHMKISWNLMSSYLV
Sbjct: 453 PDLLRFVASMPSHMKISWNLMSSYLV 478
>ref|XP_006389943.1| hypothetical protein EUTSA_v10018480mg [Eutrema salsugineum]
gi|557086377|gb|ESQ27229.1| hypothetical protein
EUTSA_v10018480mg [Eutrema salsugineum]
Length = 478
Score = 494 bits (1271), Expect = e-137
Identities = 237/325 (72%), Positives = 279/325 (85%)
Frame = -3
Query: 1495 ISKRFDIIPSGTLYPNADEIEYLRRLVIYKDSSIILLNKPPKLPVKGNVPVHNSMDXXXX 1316
ISKR+D IPSGTLYPNADEI YL+RLV +KDS+II+LNKPPKLPVKGNVP+HNSMD
Sbjct: 155 ISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPVKGNVPIHNSMDALAA 214
Query: 1315 XXLSYDYDEGPKLVHRLDRESSGLLLMGRTAESISYLHLLFSDINKAKSLSEAWSAACEA 1136
LS+ DEGP+L+HRLDRE+SGLL+MGRT ESI +LH +FSD S +AW+ ACEA
Sbjct: 215 AALSFGKDEGPRLLHRLDRETSGLLVMGRTKESIDHLHSVFSDFKGRDSRCKAWNKACEA 274
Query: 1135 TYQKYWALVIGCPKEKEGLVCAPLSKVLLDDGKTERVILAHGSGLEASQEAITEYRVLGP 956
YQ+YWALVIG PK+KEG++ AP+SKVLLDDGKT+RV+LA GSG EASQEAITEYRVLGP
Sbjct: 275 MYQQYWALVIGSPKDKEGVISAPISKVLLDDGKTDRVVLARGSGFEASQEAITEYRVLGP 334
Query: 955 MINGCSWIELCPHTSRKHQLRIHCAEALGTPIVGDFKYGWFVHRKWKQMPRIDLEPNSRE 776
MINGCSW+EL P TSRKHQLR+HCAEALGTPIVGD+KYGWFVH+KWKQMP++D+EP S +
Sbjct: 335 MINGCSWLELRPLTSRKHQLRVHCAEALGTPIVGDYKYGWFVHKKWKQMPQVDIEPTSGK 394
Query: 775 PYRMQRPEGLDVQKGSVLSKVPLIHLHFREIVLPNVEKFLEYHTSKHDTRRPLPKEGSKP 596
PY+++RPEGLD+QKGSVLSKVPL+HLH RE+VLPN+ KFL + + + P SKP
Sbjct: 395 PYKLRRPEGLDIQKGSVLSKVPLLHLHCREMVLPNIAKFL-HVLNNQEIDSLHPGIISKP 453
Query: 595 DVLRFVASMPSHMKISWNLMSSYLV 521
D+LRFVASMPSHMKISWN+MSSYLV
Sbjct: 454 DLLRFVASMPSHMKISWNIMSSYLV 478