BLASTX nr result
ID: Rauwolfia21_contig00032290
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00032290
(424 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320845.1| exonuclease RRP41 family protein [Populus tr... 70 3e-10
ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative ... 69 6e-10
ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [... 69 6e-10
gb|EOX95794.1| 3'-5'-exoribonuclease family protein isoform 2 [T... 69 8e-10
gb|EOX95793.1| 3'-5'-exoribonuclease family protein isoform 1 [T... 69 8e-10
ref|XP_004494791.1| PREDICTED: exosome complex component RRP41-l... 68 1e-09
ref|XP_004494789.1| PREDICTED: exosome complex component RRP41-l... 68 1e-09
ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago ... 68 1e-09
ref|XP_006443538.1| hypothetical protein CICLE_v10021944mg [Citr... 67 3e-09
ref|XP_003554748.1| PREDICTED: exosome complex component RRP41-l... 67 3e-09
ref|XP_003549686.1| PREDICTED: exosome complex component RRP41 i... 67 3e-09
ref|XP_006291576.1| hypothetical protein CARUB_v10017729mg, part... 66 5e-09
ref|XP_006286552.1| hypothetical protein CARUB_v10001838mg [Caps... 66 5e-09
ref|XP_002878393.1| hypothetical protein ARALYDRAFT_486650 [Arab... 66 5e-09
ref|XP_003567917.1| PREDICTED: exosome complex component RRP41-l... 65 7e-09
ref|XP_006339670.1| PREDICTED: exosome complex component RRP41-l... 65 1e-08
ref|XP_006402463.1| hypothetical protein EUTSA_v10006211mg [Eutr... 65 1e-08
ref|XP_004229977.1| PREDICTED: exosome complex component RRP41-l... 65 1e-08
gb|EXC22513.1| Exosome complex component [Morus notabilis] 64 2e-08
ref|XP_006660459.1| PREDICTED: exosome complex component RRP41-l... 64 2e-08
>ref|XP_002320845.1| exonuclease RRP41 family protein [Populus trichocarpa]
gi|118489833|gb|ABK96716.1| unknown [Populus trichocarpa
x Populus deltoides] gi|222861618|gb|EEE99160.1|
exonuclease RRP41 family protein [Populus trichocarpa]
Length = 241
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
F +P+ DLNYVEDSAGGPDVTVGILPKLD+VTLLQMDA
Sbjct: 160 FLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDA 199
>ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
gi|223529966|gb|EEF31893.1| Exosome complex exonuclease
RRP41, putative [Ricinus communis]
Length = 241
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGGPDVTVGILPKLD+VTLLQMDA
Sbjct: 160 YLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDA 199
>ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [Vitis vinifera]
gi|147867252|emb|CAN81194.1| hypothetical protein
VITISV_022853 [Vitis vinifera]
gi|297745390|emb|CBI40470.3| unnamed protein product
[Vitis vinifera]
Length = 241
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGGPDVTVGILPKLD+VTLLQMDA
Sbjct: 160 YLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDA 199
>gb|EOX95794.1| 3'-5'-exoribonuclease family protein isoform 2 [Theobroma cacao]
Length = 241
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNY+EDSAGGPDVTVGILPKLD+VTLLQMDA
Sbjct: 160 YLNSTPLLDLNYIEDSAGGPDVTVGILPKLDKVTLLQMDA 199
>gb|EOX95793.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao]
Length = 316
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNY+EDSAGGPDVTVGILPKLD+VTLLQMDA
Sbjct: 235 YLNSTPLLDLNYIEDSAGGPDVTVGILPKLDKVTLLQMDA 274
>ref|XP_004494791.1| PREDICTED: exosome complex component RRP41-like isoform X3 [Cicer
arietinum]
Length = 223
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGGPDVTVGILPKLD+VTLLQMD+
Sbjct: 142 YLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDS 181
>ref|XP_004494789.1| PREDICTED: exosome complex component RRP41-like isoform X1 [Cicer
arietinum] gi|502113882|ref|XP_004494790.1| PREDICTED:
exosome complex component RRP41-like isoform X2 [Cicer
arietinum]
Length = 241
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGGPDVTVGILPKLD+VTLLQMD+
Sbjct: 160 YLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDS 199
>ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago truncatula]
gi|355501548|gb|AES82751.1| Exosome complex exonuclease
RRP41 [Medicago truncatula]
Length = 241
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGGPDVTVGILPKLD+VTLLQMD+
Sbjct: 160 YLNSTPLLDLNYVEDSAGGPDVTVGILPKLDKVTLLQMDS 199
>ref|XP_006443538.1| hypothetical protein CICLE_v10021944mg [Citrus clementina]
gi|568851047|ref|XP_006479205.1| PREDICTED: exosome
complex component RRP41-like isoform X1 [Citrus
sinensis] gi|568851049|ref|XP_006479206.1| PREDICTED:
exosome complex component RRP41-like isoform X2 [Citrus
sinensis] gi|557545800|gb|ESR56778.1| hypothetical
protein CICLE_v10021944mg [Citrus clementina]
Length = 241
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGGPDVTVGILP LD+VTLLQMDA
Sbjct: 160 YLNSTPLLDLNYVEDSAGGPDVTVGILPTLDKVTLLQMDA 199
>ref|XP_003554748.1| PREDICTED: exosome complex component RRP41-like [Glycine max]
Length = 241
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGGPDVT+GILPKLD+VTLLQMD+
Sbjct: 160 YLNSTPLLDLNYVEDSAGGPDVTLGILPKLDKVTLLQMDS 199
>ref|XP_003549686.1| PREDICTED: exosome complex component RRP41 isoform X1 [Glycine max]
gi|571535380|ref|XP_006600700.1| PREDICTED: exosome
complex component RRP41 isoform X2 [Glycine max]
Length = 241
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/40 (75%), Positives = 36/40 (90%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGGPDVT+GILPKLD+VTLLQMD+
Sbjct: 160 YLNSTPLLDLNYVEDSAGGPDVTLGILPKLDKVTLLQMDS 199
>ref|XP_006291576.1| hypothetical protein CARUB_v10017729mg, partial [Capsella rubella]
gi|482560283|gb|EOA24474.1| hypothetical protein
CARUB_v10017729mg, partial [Capsella rubella]
Length = 299
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGG DVTVGILPKLD+VTLLQMDA
Sbjct: 218 YLNSTPLLDLNYVEDSAGGADVTVGILPKLDKVTLLQMDA 257
>ref|XP_006286552.1| hypothetical protein CARUB_v10001838mg [Capsella rubella]
gi|482555258|gb|EOA19450.1| hypothetical protein
CARUB_v10001838mg [Capsella rubella]
Length = 241
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGG DVTVGILPKLD+VTLLQMDA
Sbjct: 160 YLNSTPLLDLNYVEDSAGGADVTVGILPKLDKVTLLQMDA 199
>ref|XP_002878393.1| hypothetical protein ARALYDRAFT_486650 [Arabidopsis lyrata subsp.
lyrata] gi|297324231|gb|EFH54652.1| hypothetical protein
ARALYDRAFT_486650 [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 65.9 bits (159), Expect = 5e-09
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGG DVTVGILPKLD+VTLLQMDA
Sbjct: 160 YLNSTPLLDLNYVEDSAGGADVTVGILPKLDKVTLLQMDA 199
>ref|XP_003567917.1| PREDICTED: exosome complex component RRP41-like [Brachypodium
distachyon]
Length = 242
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +3
Query: 315 SPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
SP+ DLNY+EDSAGGPDVTVGIL K+D+VTLLQMDA
Sbjct: 166 SPLLDLNYIEDSAGGPDVTVGILAKMDKVTLLQMDA 201
>ref|XP_006339670.1| PREDICTED: exosome complex component RRP41-like isoform X1 [Solanum
tuberosum] gi|565345171|ref|XP_006339671.1| PREDICTED:
exosome complex component RRP41-like isoform X2 [Solanum
tuberosum]
Length = 243
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNY+EDSAGG DVTVGILPKLD+VTLLQMDA
Sbjct: 160 YLNSTPLLDLNYLEDSAGGADVTVGILPKLDKVTLLQMDA 199
>ref|XP_006402463.1| hypothetical protein EUTSA_v10006211mg [Eutrema salsugineum]
gi|557103562|gb|ESQ43916.1| hypothetical protein
EUTSA_v10006211mg [Eutrema salsugineum]
Length = 241
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNY+EDSAGG DVTVGILPKLD+VTLLQMDA
Sbjct: 159 YLNSTPLLDLNYLEDSAGGADVTVGILPKLDKVTLLQMDA 198
>ref|XP_004229977.1| PREDICTED: exosome complex component RRP41-like [Solanum
lycopersicum]
Length = 243
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNY+EDSAGG DVTVGILPKLD+VTLLQMDA
Sbjct: 160 YLNSTPLLDLNYLEDSAGGADVTVGILPKLDKVTLLQMDA 199
>gb|EXC22513.1| Exosome complex component [Morus notabilis]
Length = 260
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +3
Query: 303 FSGDSPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+ +P+ DLNYVEDSAGG DVTVGI PKLD+VTLLQMDA
Sbjct: 147 YLNSTPLLDLNYVEDSAGGADVTVGIFPKLDKVTLLQMDA 186
>ref|XP_006660459.1| PREDICTED: exosome complex component RRP41-like isoform X1 [Oryza
brachyantha] gi|573956455|ref|XP_006660460.1| PREDICTED:
exosome complex component RRP41-like isoform X2 [Oryza
brachyantha] gi|573956457|ref|XP_006660461.1| PREDICTED:
exosome complex component RRP41-like isoform X3 [Oryza
brachyantha]
Length = 223
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/36 (80%), Positives = 34/36 (94%)
Frame = +3
Query: 315 SPISDLNYVEDSAGGPDVTVGILPKLDEVTLLQMDA 422
+P+ DLNY+EDSAGGPDVTVGIL K+D+VTLLQMDA
Sbjct: 147 TPLLDLNYIEDSAGGPDVTVGILAKMDKVTLLQMDA 182