BLASTX nr result
ID: Rauwolfia21_contig00031482
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00031482
(243 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 149 4e-34
ref|XP_003634235.1| PREDICTED: uncharacterized protein LOC100248... 139 4e-31
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 135 6e-30
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 132 4e-29
emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera] 132 6e-29
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 131 8e-29
emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera] 128 7e-28
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera] 126 3e-27
emb|CAN65149.1| hypothetical protein VITISV_037085 [Vitis vinifera] 126 3e-27
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 123 3e-26
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera] 120 2e-25
emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera] 119 3e-25
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera] 119 3e-25
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 118 9e-25
gb|AAK29467.1| polyprotein-like [Solanum chilense] 117 1e-24
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera] 113 3e-23
ref|XP_004243076.1| PREDICTED: uncharacterized protein LOC101255... 112 4e-23
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 110 3e-22
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 110 3e-22
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 110 3e-22
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 149 bits (376), Expect = 4e-34
Identities = 71/80 (88%), Positives = 78/80 (97%)
Frame = +1
Query: 4 KAMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKK 183
+AMQDE+ SLHENKTFELVKLPKGKRALKNKWVFK+KH+EH+S PRFKARLVVKGF+Q+K
Sbjct: 829 EAMQDEIKSLHENKTFELVKLPKGKRALKNKWVFKMKHDEHNSLPRFKARLVVKGFNQRK 888
Query: 184 GIDFDEIFSPVVKMTSIRTV 243
GIDFDEIFSPVVKMTSIRTV
Sbjct: 889 GIDFDEIFSPVVKMTSIRTV 908
>ref|XP_003634235.1| PREDICTED: uncharacterized protein LOC100248387 [Vitis vinifera]
Length = 952
Score = 139 bits (350), Expect = 4e-31
Identities = 66/79 (83%), Positives = 74/79 (93%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AMQDEM SLHEN +FELVKLPKGKRALKN+WV+++K EEH+S PR+KARLVVKGF+QKKG
Sbjct: 12 AMQDEMESLHENHSFELVKLPKGKRALKNRWVYRVKQEEHTSQPRYKARLVVKGFNQKKG 71
Query: 187 IDFDEIFSPVVKMTSIRTV 243
IDFDEIFSPVVKMTSIR V
Sbjct: 72 IDFDEIFSPVVKMTSIRVV 90
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 135 bits (340), Expect = 6e-30
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AMQDEM SLHEN +FELVKLPKGKRALKN+WV+++K EEH+S PR+KARLVVKGF+QKKG
Sbjct: 728 AMQDEMESLHENHSFELVKLPKGKRALKNRWVYRVKQEEHTSQPRYKARLVVKGFNQKKG 787
Query: 187 IDFDEIFSPVVKMTSIRTV 243
IDFDEIF PVVKM+SIR V
Sbjct: 788 IDFDEIFFPVVKMSSIRVV 806
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 132 bits (333), Expect = 4e-29
Identities = 62/78 (79%), Positives = 72/78 (92%)
Frame = +1
Query: 10 MQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKGI 189
M+DEM SLHEN +FELVKLPKGKR LKN+WV+++K EEH+S PR+KARLVVKGF+QKKGI
Sbjct: 797 MRDEMESLHENHSFELVKLPKGKRXLKNRWVYRVKQEEHTSQPRYKARLVVKGFNQKKGI 856
Query: 190 DFDEIFSPVVKMTSIRTV 243
DFDEIFSPVVKM+SIR V
Sbjct: 857 DFDEIFSPVVKMSSIRVV 874
>emb|CAN64589.1| hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 132 bits (331), Expect = 6e-29
Identities = 62/79 (78%), Positives = 73/79 (92%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AMQDEM SLHEN ++ELV+LPKGKRALKN+WV+++K EEH+S PR+KARLVVKG+SQKKG
Sbjct: 575 AMQDEMKSLHENHSYELVELPKGKRALKNRWVYRVKQEEHASQPRYKARLVVKGYSQKKG 634
Query: 187 IDFDEIFSPVVKMTSIRTV 243
IDFDEIFS VVKM+SIR V
Sbjct: 635 IDFDEIFSSVVKMSSIRVV 653
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 131 bits (330), Expect = 8e-29
Identities = 62/81 (76%), Positives = 73/81 (90%)
Frame = +1
Query: 1 FKAMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQK 180
F+AMQ+EMNSL+ N TFELVK PK ++ALKN+WV+++KHEE +S PRFKARLVVKGFSQK
Sbjct: 825 FEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRVKHEEGTSVPRFKARLVVKGFSQK 884
Query: 181 KGIDFDEIFSPVVKMTSIRTV 243
KGIDFDEIFSPVVK +SIR V
Sbjct: 885 KGIDFDEIFSPVVKFSSIRVV 905
>emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
Length = 885
Score = 128 bits (322), Expect = 7e-28
Identities = 61/79 (77%), Positives = 70/79 (88%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AMQDEM LHEN ++ELVKLP GKRALKN+WV+++K EEH+S PR+KARLVVKGFSQKKG
Sbjct: 615 AMQDEMKPLHENHSYELVKLPNGKRALKNRWVYRVKQEEHASXPRYKARLVVKGFSQKKG 674
Query: 187 IDFDEIFSPVVKMTSIRTV 243
IDFDEIFS VVKM+SI V
Sbjct: 675 IDFDEIFSXVVKMSSICVV 693
>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
Length = 1204
Score = 126 bits (317), Expect = 3e-27
Identities = 60/79 (75%), Positives = 69/79 (87%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AMQDEM SLH N FELVKLPKGKRALK +WV+++K EEH+S P +KARL+VKGF+QKKG
Sbjct: 697 AMQDEMESLHVNHYFELVKLPKGKRALKXRWVYRVKQEEHTSQPXYKARLIVKGFNQKKG 756
Query: 187 IDFDEIFSPVVKMTSIRTV 243
DFDEIFSPVVKM+SIR V
Sbjct: 757 XDFDEIFSPVVKMSSIRVV 775
>emb|CAN65149.1| hypothetical protein VITISV_037085 [Vitis vinifera]
Length = 685
Score = 126 bits (316), Expect = 3e-27
Identities = 59/78 (75%), Positives = 69/78 (88%)
Frame = +1
Query: 10 MQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKGI 189
MQDEM SLHEN +FE VKLPKGKR+LKN WV+++K E+H+S PR+K RLVVKGFSQKK I
Sbjct: 596 MQDEMKSLHENHSFEPVKLPKGKRSLKNGWVYRVKQEKHTSQPRYKVRLVVKGFSQKKSI 655
Query: 190 DFDEIFSPVVKMTSIRTV 243
DFDEIFSPV+KM+SIR V
Sbjct: 656 DFDEIFSPVIKMSSIRVV 673
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 123 bits (308), Expect = 3e-26
Identities = 56/79 (70%), Positives = 71/79 (89%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AMQDEM SLH+N TF+LVKLPK K+AL+N+W++++K E +S+ PR+KARLVVKGF Q+KG
Sbjct: 773 AMQDEMKSLHDNHTFDLVKLPKDKKALENRWIYRVKQESNSTSPRYKARLVVKGFRQRKG 832
Query: 187 IDFDEIFSPVVKMTSIRTV 243
IDF+EIFSPVVKM+SIR V
Sbjct: 833 IDFNEIFSPVVKMSSIRIV 851
>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
Length = 809
Score = 120 bits (301), Expect = 2e-25
Identities = 57/79 (72%), Positives = 67/79 (84%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AMQDEM SLHEN ++E +KLP KRALKNKWV+++K EEH+S P +KA+LVVKGF Q KG
Sbjct: 308 AMQDEMKSLHENISYEFIKLPNEKRALKNKWVYRVKQEEHASQPCYKAKLVVKGFIQNKG 367
Query: 187 IDFDEIFSPVVKMTSIRTV 243
IDFDEIFSPVVKM+ IR V
Sbjct: 368 IDFDEIFSPVVKMSFIRVV 386
>emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera]
Length = 973
Score = 119 bits (299), Expect = 3e-25
Identities = 57/72 (79%), Positives = 65/72 (90%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AMQDEM SLHEN +FELVKLPKGK+ALKN+WV+++K EEH+S PR+KARLVVK FSQKK
Sbjct: 637 AMQDEMKSLHENHSFELVKLPKGKKALKNRWVYRVKQEEHTSQPRYKARLVVKWFSQKKS 696
Query: 187 IDFDEIFSPVVK 222
IDFDEIFS VVK
Sbjct: 697 IDFDEIFSLVVK 708
>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 119 bits (299), Expect = 3e-25
Identities = 58/80 (72%), Positives = 68/80 (85%)
Frame = +1
Query: 4 KAMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKK 183
+AM +E+ SLH+N TFEL++LPKGKR LKNKWV K K E + S PR+KARLVVKGFSQKK
Sbjct: 375 RAMHEEIKSLHKNNTFELMELPKGKRTLKNKWVLKRKPEPNESQPRYKARLVVKGFSQKK 434
Query: 184 GIDFDEIFSPVVKMTSIRTV 243
GIDF+EIFSPVVKM+ IR V
Sbjct: 435 GIDFEEIFSPVVKMSLIRVV 454
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 118 bits (295), Expect = 9e-25
Identities = 58/80 (72%), Positives = 67/80 (83%)
Frame = +1
Query: 4 KAMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKK 183
KAMQ+EM SL +N T++LV+LPKGKR LK KWVFK+K + R+KARLVVKGF QKK
Sbjct: 828 KAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKK 887
Query: 184 GIDFDEIFSPVVKMTSIRTV 243
GIDFDEIFSPVVKMTSIRT+
Sbjct: 888 GIDFDEIFSPVVKMTSIRTI 907
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 117 bits (294), Expect = 1e-24
Identities = 57/80 (71%), Positives = 67/80 (83%)
Frame = +1
Query: 4 KAMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKK 183
KAM +EM SL +N T++LV+LPKGKR LK KWVFK+K + + R+KARLVVKGF QKK
Sbjct: 829 KAMHEEMGSLQKNGTYQLVELPKGKRPLKCKWVFKLKKDGNGKLVRYKARLVVKGFEQKK 888
Query: 184 GIDFDEIFSPVVKMTSIRTV 243
GIDFDEIFSPVVKMTSIRT+
Sbjct: 889 GIDFDEIFSPVVKMTSIRTI 908
>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
Length = 788
Score = 113 bits (282), Expect = 3e-23
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +1
Query: 4 KAMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKK 183
+AM +EM S H+N T+EL++LPKGKRALKNKWV K K E + S PR+K RLVVKG SQKK
Sbjct: 482 RAMHEEMKSFHKNNTYELMELPKGKRALKNKWVLKRKPEPNXSQPRYKXRLVVKGXSQKK 541
Query: 184 GIDFDEIFSPVVKMTSIRTV 243
DF+EIFSPVVKM+SIR V
Sbjct: 542 DFDFEEIFSPVVKMSSIRVV 561
>ref|XP_004243076.1| PREDICTED: uncharacterized protein LOC101255508 [Solanum
lycopersicum]
Length = 301
Score = 112 bits (281), Expect = 4e-23
Identities = 55/75 (73%), Positives = 63/75 (84%)
Frame = +1
Query: 10 MQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKGI 189
+QDEM SLHEN T+ELVKLPKG ALK+KW FKIK EE++ PR+K R+VVKGF Q KGI
Sbjct: 186 IQDEMKSLHENHTYELVKLPKGMTALKSKWAFKIKIEEYNLNPRYKVRMVVKGFGQMKGI 245
Query: 190 DFDEIFSPVVKMTSI 234
DFDEIFS VVKM+SI
Sbjct: 246 DFDEIFSLVVKMSSI 260
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 110 bits (274), Expect = 3e-22
Identities = 49/79 (62%), Positives = 68/79 (86%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AM +EM +LH NKT+ELV+LPKG++A+ NKWV+KIK + + R++ARLVVKG++QK+G
Sbjct: 806 AMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEG 865
Query: 187 IDFDEIFSPVVKMTSIRTV 243
IDF+EIFSPVV++T+IR V
Sbjct: 866 IDFNEIFSPVVRLTTIRVV 884
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 110 bits (274), Expect = 3e-22
Identities = 49/79 (62%), Positives = 68/79 (86%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AM +EM +LH NKT+ELV+LPKG++A+ NKWV+KIK + + R++ARLVVKG++QK+G
Sbjct: 806 AMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEG 865
Query: 187 IDFDEIFSPVVKMTSIRTV 243
IDF+EIFSPVV++T+IR V
Sbjct: 866 IDFNEIFSPVVRLTTIRVV 884
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 110 bits (274), Expect = 3e-22
Identities = 49/79 (62%), Positives = 68/79 (86%)
Frame = +1
Query: 7 AMQDEMNSLHENKTFELVKLPKGKRALKNKWVFKIKHEEHSSCPRFKARLVVKGFSQKKG 186
AM +EM +LH NKT+ELV+LPKG++A+ NKWV+KIK + + R++ARLVVKG++QK+G
Sbjct: 806 AMHEEMEALHRNKTWELVELPKGRKAIGNKWVYKIKRDGNDQVERYRARLVVKGYAQKEG 865
Query: 187 IDFDEIFSPVVKMTSIRTV 243
IDF+EIFSPVV++T+IR V
Sbjct: 866 IDFNEIFSPVVRLTTIRVV 884