BLASTX nr result
ID: Rauwolfia21_contig00031375
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00031375
(650 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 119 1e-24
ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659... 118 1e-24
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 99 1e-18
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 99 1e-18
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 77 3e-17
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 72 5e-17
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 77 6e-17
gb|EEE51936.1| hypothetical protein OsJ_33562 [Oryza sativa Japo... 71 2e-16
gb|EEC67968.1| hypothetical protein OsI_35722 [Oryza sativa Indi... 71 2e-16
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 75 3e-16
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 73 5e-16
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 72 9e-16
ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261... 68 9e-16
gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indi... 64 3e-15
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 76 3e-15
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 76 3e-15
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 74 5e-15
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 87 6e-15
gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana] 72 6e-15
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 79 1e-12
>ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max]
Length = 603
Score = 119 bits (297), Expect = 1e-24
Identities = 73/219 (33%), Positives = 117/219 (53%), Gaps = 22/219 (10%)
Frame = +3
Query: 60 RSDRCTKLFHDLVKRNAKRNFITAVTRSDEQLTESQSQVANEFVDFYISLLSSWE----- 224
++D+C+K FH L+KRN FI A+ D T SQ ++A FV+ + +L S+ E
Sbjct: 179 QADKCSKFFHALIKRNIHSRFIAAIRLEDGHKTSSQDEIALAFVNHFRNLFSAHELTQTP 238
Query: 225 -------SPVMQQDY------PRNRRLTLQQISQMRK*KLHFLVLGTQRYRDQMDLLLIF 365
P + D P +++ IS M K G + ++F
Sbjct: 239 SISICNRGPKVPIDCFAALLCPTSKQEVWNVISVMDNNKAP----GPDGFN------VLF 288
Query: 366 FKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIYK 545
FK+AW IG + A EFF + ++LKQ+NH +IALIPK D V ++PISCC ++YK
Sbjct: 289 FKKAWNIIGDDIFEAVNEFFTTGKILKQLNHAIIALIPKHDQASQVNHFRPISCCNLLYK 348
Query: 546 IISNVL----SAILESLIDST*AAFVECHQLVENVFIAQ 650
I+S +L + +LE++I T AF++ ++++N+F+ Q
Sbjct: 349 IVSKILANRIAPVLETIIGETQTAFIKNKKMMDNIFLIQ 387
>ref|XP_006576082.1| PREDICTED: uncharacterized protein LOC102659506 [Glycine max]
Length = 964
Score = 118 bits (296), Expect = 1e-24
Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 12/209 (5%)
Frame = +3
Query: 60 RSDRCTKLFHDLVKRNAKRNFITAVTRSDEQLTESQSQVANEFVDFYISLLSSWE---SP 230
++D+C+K FH L+KRN FI A+ D T SQ ++A FV+ + + S+ E +P
Sbjct: 727 QADKCSKFFHALIKRNKHSRFIAAIRLEDGHNTSSQDEIALAFVNHFRNFFSAHELTQTP 786
Query: 231 VMQ-----QDYPRNRRLTLQQISQMRK*KLHFLVLGTQRYRDQMDLLLIFFKEAWGTIGT 395
+ P + L + +K V+ + ++FFK+AW +G
Sbjct: 787 SISICNRGPKVPTDCFAALLCPTSKQKVWNIISVMANNKAPGPDGFNVLFFKKAWNIVGD 846
Query: 396 LVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIYKIISNVL---- 563
+ +A EFF + ++LKQ+NH +I LIPK D V ++PISCC ++YKI+S +L
Sbjct: 847 DIFAAVNEFFTTGKILKQLNHAIIVLIPKHDQASQVNHFRPISCCNLLYKIVSKILANRI 906
Query: 564 SAILESLIDST*AAFVECHQLVENVFIAQ 650
+ +LE++I T AF++ ++++N+F+ Q
Sbjct: 907 APVLETIIGETQTAFIKNRKMMDNIFLVQ 935
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 98.6 bits (244), Expect = 1e-18
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Frame = +3
Query: 66 DRCTKLFHDLVKRNAKRNFITAVTRSDEQLTESQSQVANEFVDFYISLLSSWESPVMQQD 245
D T FH +V N I ++ S+ L +SQ + + V +Y LL S ESP +
Sbjct: 225 DSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQ 284
Query: 246 YPRNRRLTLQ----QISQMRK*------KLHFLVLGTQRYRDQMDLLLIFFKEAWGTIGT 395
N LT + Q S++ K K F L + + FF++ W IG
Sbjct: 285 EDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGP 344
Query: 396 LVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIYKIISNVLSA-- 569
V +A EFF S Q+LKQ N T + LIPK + + +++PISC +YK+IS +L++
Sbjct: 345 EVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRL 404
Query: 570 --ILESLIDST*AAFVECHQLVENVFIA 647
+L ++I + +AF+ L ENV +A
Sbjct: 405 QGLLSAVIGHSQSAFLPGRSLAENVLLA 432
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 98.6 bits (244), Expect = 1e-18
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Frame = +3
Query: 66 DRCTKLFHDLVKRNAKRNFITAVTRSDEQLTESQSQVANEFVDFYISLLSSWESPVMQQD 245
D T FH +V N I ++ S+ L +SQ + + V +Y LL S ESP +
Sbjct: 225 DSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVTYYERLLGSIESPFSMEQ 284
Query: 246 YPRNRRLTLQ----QISQMRK*------KLHFLVLGTQRYRDQMDLLLIFFKEAWGTIGT 395
N LT + Q S++ K K F L + + FF++ W IG
Sbjct: 285 EDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGP 344
Query: 396 LVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIYKIISNVLSA-- 569
V +A EFF S Q+LKQ N T + LIPK + + +++PISC +YK+IS +L++
Sbjct: 345 EVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRL 404
Query: 570 --ILESLIDST*AAFVECHQLVENVFIA 647
+L ++I + +AF+ L ENV +A
Sbjct: 405 QGLLSAVIGHSQSAFLPGRSLAENVLLA 432
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 76.6 bits (187), Expect(2) = 3e-17
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
FFK W G +A Q FF + K +N T++ALIPK D + DY+PISCC V+Y
Sbjct: 777 FFKATWSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLY 836
Query: 543 KIISNVLS----AILESLIDST*AAFVECHQLVENVFIA 647
K+IS +L+ +L S I +AFV+ L+ENV +A
Sbjct: 837 KVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLA 875
Score = 38.1 bits (87), Expect(2) = 3e-17
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 242 RLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQGS 376
R S + ++T EEI+ LF+ + K PGPDG TS FF+ +
Sbjct: 737 RCSVTDQNILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKAT 781
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 71.6 bits (174), Expect(2) = 5e-17
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
FF++ W IG V A Q FF S MLK++NHT +ALIPK D ++PIS C IY
Sbjct: 471 FFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIY 530
Query: 543 KIIS----NVLSAILESLIDST*AAFVECHQLVENVFIA 647
K+IS N L L +I AF+ + +N+ IA
Sbjct: 531 KVISKIITNRLKITLGKIIHPLQGAFIPERLIQDNILIA 569
Score = 42.4 bits (98), Expect(2) = 5e-17
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 245 LSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQ 370
+SE AY+ + ++ EEIK +F K PGPDG YFFQ
Sbjct: 432 VSEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQ 473
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 77.0 bits (188), Expect(2) = 6e-17
Identities = 43/99 (43%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
FFK W IG T A Q FF + K IN T++ALIPK + DY+PISCC V+Y
Sbjct: 480 FFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLY 539
Query: 543 KIIS----NVLSAILESLIDST*AAFVECHQLVENVFIA 647
K+IS N L +L I +AFV+ L+EN+ +A
Sbjct: 540 KVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLA 578
Score = 36.6 bits (83), Expect(2) = 6e-17
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2
Query: 242 RLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQGS 376
R S+ + +T EEI+ LF K PGPDG TS FF+ +
Sbjct: 440 RCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKAT 484
>gb|EEE51936.1| hypothetical protein OsJ_33562 [Oryza sativa Japonica Group]
Length = 419
Score = 71.2 bits (173), Expect(2) = 2e-16
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
F++ WGT+ T + A ++FFQS M + +N+T I LIPK + + DY+PIS C V+Y
Sbjct: 68 FYQRNWGTLKTYIVRAVRDFFQSGIMPEGVNNTAIVLIPKIEQPLELKDYRPISLCNVVY 127
Query: 543 KIIS----NVLSAILESLIDST*AAFVECHQLVENVFIA 647
K++S N L +L+ ++ +A ++ + +N +A
Sbjct: 128 KVVSKCLVNRLRPVLDEVVSEEQSASIQGRMITDNALLA 166
Score = 40.4 bits (93), Expect(2) = 2e-16
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 242 RLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQGSLG 382
++ EE + D DEEI LF G K PGPDG + F+Q + G
Sbjct: 28 KVLEEMNVKLCADFNDEEIAQALFQIGPLKSPGPDGFPARFYQRNWG 74
>gb|EEC67968.1| hypothetical protein OsI_35722 [Oryza sativa Indica Group]
Length = 301
Score = 71.2 bits (173), Expect(2) = 2e-16
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
F++ WGT+ T + A ++FFQS M + +N+T I LIPK + + DY+PIS C V+Y
Sbjct: 68 FYQRNWGTLKTYIVRAVRDFFQSGIMPEGVNNTAIVLIPKIEQPLELKDYRPISLCNVVY 127
Query: 543 KIIS----NVLSAILESLIDST*AAFVECHQLVENVFIA 647
K++S N L +L+ ++ +A ++ + +N +A
Sbjct: 128 KVVSKCLVNRLRPVLDEVVSEEQSASIQGRMITDNALLA 166
Score = 40.4 bits (93), Expect(2) = 2e-16
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 242 RLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQGSLG 382
++ EE + D DEEI LF G K PGPDG + F+Q + G
Sbjct: 28 KVLEEMNVKLCADFNDEEIAQALFQIGPLKSPGPDGFPARFYQRNWG 74
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 75.1 bits (183), Expect(2) = 3e-16
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
FFK W G +A + FF + K +N T++ALIPK D ++ DY+PISCC VIY
Sbjct: 53 FFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIY 112
Query: 543 KIIS----NVLSAILESLIDST*AAFVECHQLVENVFIA 647
K+IS N L +L + I +AFV L+ENV +A
Sbjct: 113 KVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLA 151
Score = 36.2 bits (82), Expect(2) = 3e-16
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 242 RLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQGS 376
R S + ++T EE + LF+ K PGPDG TS FF+ +
Sbjct: 13 RCSATDQDMLTREVTSEENQKVLFAMPSNKFPGPDGYTSEFFKAT 57
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 73.2 bits (178), Expect(2) = 5e-16
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
FFKE+W +G A Q FF + K +N T++ALIPK + DY+PISCC V+Y
Sbjct: 33 FFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLESKEMKDYRPISCCNVMY 92
Query: 543 KIISNVLS----AILESLIDST*AAFVECHQLVENVFIA 647
K+IS +L+ +L I ++FV+ L+ENV +A
Sbjct: 93 KVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLA 131
Score = 37.4 bits (85), Expect(2) = 5e-16
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2
Query: 281 ITDEEIKITLFSFGDTKVPGPDGSTSYFFQGS 376
++ EEIK LFS + K PGPDG TS FF+ S
Sbjct: 6 VSAEEIKKVLFSMPNDKSPGPDGFTSEFFKES 37
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 71.6 bits (174), Expect(2) = 9e-16
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
F+K W IG T Q FFQ + K IN ++ALIPK + DY+PISCC V+Y
Sbjct: 127 FYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLY 186
Query: 543 KIIS----NVLSAILESLIDST*AAFVECHQLVENVFIA 647
K+IS N L +L I +AFV+ L+EN+ +A
Sbjct: 187 KVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLA 225
Score = 38.1 bits (87), Expect(2) = 9e-16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 242 RLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQGS 376
R + + +++ EEIK LFS K PGPDG TS F++ +
Sbjct: 87 RCTNSDNEMLTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKAT 131
>ref|XP_004252692.1| PREDICTED: uncharacterized protein LOC101261795 [Solanum
lycopersicum]
Length = 413
Score = 68.2 bits (165), Expect(2) = 9e-16
Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +3
Query: 360 IFFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVI 539
+FFK W I V A + FF + ++ K N T+++LIPK V +Y PI+CC V+
Sbjct: 265 LFFKHTWKIIKKDVIEAVKNFFTTGKLFKPFNCTLVSLIPKVQCPKTVKEYTPIACCTVL 324
Query: 540 YKIISNVLSA----ILESLIDST*AAFVECHQLVENVFIA 647
YKIIS V++ ++ +I + A F+ ++ +N+ +A
Sbjct: 325 YKIISKVITRRMHDVIHDVICESQAGFIPGRKIADNIILA 364
Score = 41.6 bits (96), Expect(2) = 9e-16
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 248 SEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQ 370
S +Q + TDIT++EI TL S+G+ K PG DG + FF+
Sbjct: 228 SRQQRIQLCTDITEQEIYSTLQSYGNDKAPGIDGYNALFFK 268
>gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indica Group]
Length = 1350
Score = 63.9 bits (154), Expect(2) = 3e-15
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
F++ WG + + + A +EFF+S M +N T I LIPK D + D +PI C VIY
Sbjct: 654 FYQRNWGGLKSDIVRAVKEFFRSGIMPVGVNDTAIVLIPKIDQPTELKDLRPIGLCNVIY 713
Query: 543 KIIS----NVLSAILESLIDST*AAFVECHQLVENVFIA 647
K++S N L +L+ LI +AFV + +N +A
Sbjct: 714 KVVSKCLVNRLKPLLDELISVNQSAFVPGRMITDNALLA 752
Score = 43.9 bits (102), Expect(2) = 3e-15
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 239 TRLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQGSLG 382
T++S + + D T+EE+ I +F G K PGPDG ++F+Q + G
Sbjct: 613 TKVSAKMNDKLCEDFTEEEVAIAMFQIGPIKAPGPDGFPAHFYQRNWG 660
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 76.3 bits (186), Expect(2) = 3e-15
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
FFK W +G VT A QEFF+S Q+LKQ N T + LIPK + + D++PISC +Y
Sbjct: 475 FFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLY 534
Query: 543 KIISNVLSA----ILESLIDST*AAFVECHQLVENVFIA 647
K+I+ +L++ +L +I + +AF+ L ENV +A
Sbjct: 535 KVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLA 573
Score = 31.6 bits (70), Expect(2) = 3e-15
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 242 RLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQG 373
R S +Q + +D +I+ FS K GPDG +S FF+G
Sbjct: 435 RCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKG 478
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 76.3 bits (186), Expect(2) = 3e-15
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
FFK W +G VT A QEFF+S Q+LKQ N T + LIPK + + D++PISC +Y
Sbjct: 475 FFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLY 534
Query: 543 KIISNVLSA----ILESLIDST*AAFVECHQLVENVFIA 647
K+I+ +L++ +L +I + +AF+ L ENV +A
Sbjct: 535 KVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLA 573
Score = 31.6 bits (70), Expect(2) = 3e-15
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 242 RLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQG 373
R S +Q + +D +I+ FS K GPDG +S FF+G
Sbjct: 435 RCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKG 478
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 73.6 bits (179), Expect(2) = 5e-15
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
F+K+ W +G V + FF+SS M +NHT I +IPK + + DY+PI+ C V+Y
Sbjct: 76 FYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQTLSDYRPIALCNVLY 135
Query: 543 KIIS----NVLSAILESLIDST*AAFVECHQLVENVFIA 647
K+IS N L A L S++ + AAF+ + +NV IA
Sbjct: 136 KVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMIA 174
Score = 33.5 bits (75), Expect(2) = 5e-15
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 269 IATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQ 370
+ D D EI + GD K PGPDG T+ F++
Sbjct: 45 LTQDFRDSEIFEAICQIGDDKAPGPDGLTARFYK 78
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 86.7 bits (213), Expect = 6e-15
Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 13/225 (5%)
Frame = +3
Query: 12 LRENFSSNWLSASS*KRSDRCTKLFHDLVKRNAKRNFITAVTRSDEQLTESQSQVANEFV 191
L++ WL ++ D +KLF VK N I + D ++ + +V E +
Sbjct: 344 LQQKSRITWL-----QQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEIL 398
Query: 192 DFYISLLSSWESPVMQQDYPRNRR---LTLQQ----ISQMRK*KLHFLV--LGTQRYRDQ 344
+FY LL + S +M D R L+ Q I ++ ++ + +G +
Sbjct: 399 EFYKKLLGTRASTLMGVDLNTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGL 458
Query: 345 MDLLLIFFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPIS 524
FFK++WG+I + + QEFF +S+M + IN V+ L+PK H V +++PI+
Sbjct: 459 DGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIA 518
Query: 525 CCIVIYKIISNVLS----AILESLIDST*AAFVECHQLVENVFIA 647
CC VIYKIIS +L+ I+ +++ + F+ + +N+ +A
Sbjct: 519 CCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLA 563
>gb|AAF79812.1|AC020646_35 T32E20.6 [Arabidopsis thaliana]
Length = 458
Score = 71.6 bits (174), Expect(2) = 6e-15
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 FFKEAWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIY 542
F+K W IG A + FF + K IN T++ALIPK + DY+PISCC VI+
Sbjct: 221 FYKSTWDIIGKEFILAIKSFFVKGFLPKAINSTILALIPKKATTNEMKDYRPISCCNVIF 280
Query: 543 ----KIISNVLSAILESLIDST*AAFVECHQLVENVFIA 647
KII+N L +L + + +AFV+ L+ENV +A
Sbjct: 281 KVILKIIANPLKRVLPNFVVGNQSAFVQDRLLIENVLLA 319
Score = 35.4 bits (80), Expect(2) = 6e-15
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 242 RLSEEQAAYIATDITDEEIKITLFSFGDTKVPGPDGSTSYFFQGS 376
R SEE+ + +T+EEIK LF+ K GPD T F++ +
Sbjct: 181 RCSEEEKTEMTRSVTEEEIKRVLFAMPKDKSLGPDSYTMEFYKST 225
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 79.0 bits (193), Expect = 1e-12
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 21/215 (9%)
Frame = +3
Query: 66 DRCTKLFHDLVKRNAKRNFITAVTRSDEQLTESQSQVANE----FVDFYISLLSSWESPV 233
DR K FH + N I + D + SQ + E F DF ++ + +E
Sbjct: 91 DRNNKTFHRAITTREAVNSIREIVTRDGLVVTSQQDIQTEAVNYFQDFLQTIPADYEGMC 150
Query: 234 MQQ--------DYPRNRRLTLQQISQMRK*KLHFLVL-----GTQRYRDQMDLLLIFFKE 374
+++ + RL + ++ K+ F + G Y + F+K
Sbjct: 151 VEELENLLPFRCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSE------FYKA 204
Query: 375 AWGTIGTLVTSACQEFFQSSQMLKQINHTVIALIPKGDHVYVVIDYQPISCCIVIYKIIS 554
+W IG V A Q FF + K +N T++ALIPK + DY+PISCC V+YK IS
Sbjct: 205 SWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAIS 264
Query: 555 NVLS----AILESLIDST*AAFVECHQLVENVFIA 647
+L+ IL I +AFV+ L+ENV +A
Sbjct: 265 KILANRLKRILPKFIVGNQSAFVKDRLLIENVLLA 299