BLASTX nr result

ID: Rauwolfia21_contig00031259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00031259
         (470 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241181.1| PREDICTED: uncharacterized protein LOC101261...    60   2e-07
ref|XP_006350819.1| PREDICTED: UPF0503 protein At3g09070, chloro...    59   5e-07

>ref|XP_004241181.1| PREDICTED: uncharacterized protein LOC101261240 [Solanum
           lycopersicum]
          Length = 633

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 9/65 (13%)
 Frame = -1

Query: 173 CYLHPADPATGICASCLRERLSGLDSLADLE----PSSSVS----YLGNG-GDGGGEICS 21
           C+ HP++P TGICA+CLRERLSGLD+ AD E    P+ S S    Y  NG G   G  CS
Sbjct: 20  CHRHPSEPVTGICAACLRERLSGLDTSADSELSIVPTFSNSFENPYADNGPGPEPGFECS 79

Query: 20  RSKGA 6
           RSK A
Sbjct: 80  RSKAA 84


>ref|XP_006350819.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Solanum
           tuberosum]
          Length = 633

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 9/65 (13%)
 Frame = -1

Query: 173 CYLHPADPATGICASCLRERLSGLDSLADLE----PSSSVSY----LGNGGD-GGGEICS 21
           CY HP++P TGICA+CLRERLSGLDS AD E    P+ S S+    + NG + G G   S
Sbjct: 20  CYRHPSEPVTGICAACLRERLSGLDSSADSELSIVPTFSNSFENPDVDNGPEPGPGFDGS 79

Query: 20  RSKGA 6
           RSK A
Sbjct: 80  RSKAA 84


Top