BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00029999
         (1945 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]    265   7e-68
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   241   8e-61
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   239   4e-60
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     239   4e-60
gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]    237   1e-59
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     237   2e-59
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   227   2e-56
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        209   3e-51
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   207   1e-50
ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, part...   202   6e-49
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-...   202   6e-49
emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]        198   8e-48
ref|XP_006587404.1| PREDICTED: uncharacterized protein LOC102662...   195   7e-47
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   195   7e-47
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   193   3e-46
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]         193   3e-46
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     192   4e-46
ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759...   187   1e-44
ref|XP_006386829.1| hypothetical protein POPTR_0002s22700g [Popu...   179   3e-42
gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Jap...   178   9e-42

>gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 289

 Score =  265 bits (676), Expect = 7e-68
 Identities = 140/286 (48%), Positives = 182/286 (63%), Gaps = 6/286 (2%)
 Frame = -2

Query: 951 MSTTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHET 772
           M+  L LRSIL+ NKL   NFLD +RNL+IVL+ EK  Y+ +  I           + E 
Sbjct: 1   MANNLLLRSILDANKLIGPNFLDSFRNLKIVLKQEKKSYIFDTSIPPVPTTDANVEDKEA 60

Query: 771 HKKYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFR 592
           H+++KDD D A C+MLASM+ ELQKQ EHMD +S+I HL+E+FDK+ RTERYEISK+LFR
Sbjct: 61  HQRHKDDDDQAACVMLASMTLELQKQDEHMDVQSMILHLRELFDKEGRTERYEISKELFR 120

Query: 591 SKMVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIE 412
            KM EG+SV  H  +M+G IE+LGQLG  M HELS++LVLQSLPDSF+QFV+N+ MN++E
Sbjct: 121 CKMAEGSSVKPHVLKMIGPIERLGQLGLAMYHELSINLVLQSLPDSFSQFVLNFHMNRLE 180

Query: 411 TTLPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 232
            TLP+L+N+L TAE SI+K K ++LL+                                 
Sbjct: 181 ATLPKLLNMLDTAEKSIRKHKGSLLLISSSKAHTKQHKKKAQKEKKVKSQNEKALKPKGG 240

Query: 231 XGP------CHHCGKMGHWRRNCKSYLESLKDKREKEKLATPSTSG 112
                    C HCGK+GHWRRNCK YL ++    +K+KL   S SG
Sbjct: 241 VKKDKEKDICDHCGKLGHWRRNCKEYLVTVS---KKKKLIEVSDSG 283


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  241 bits (615), Expect = 8e-61
 Identities = 133/315 (42%), Positives = 183/315 (58%), Gaps = 1/315 (0%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           ++ NLRSILE  KL+ +N +DWYRNLRIVLR E   +V+  P            +   H+
Sbjct: 7   SSFNLRSILEKEKLTGTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHE 66

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           K  +D     C+MLA+MSPELQ+Q+E +DA +IIT L+ +F+ QAR +R+  SK LF  +
Sbjct: 67  KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAKRFNTSKSLFACR 126

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           + EG  V+ H  +M+G  E L +LGF +  EL+ DL+LQSLP SF  F++N+ MN +  T
Sbjct: 127 LAEGNPVSPHVIKMIGYNETLEKLGFPLSQELATDLILQSLPPSFEPFILNFNMNNMNRT 186

Query: 405 LPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 226
           L +L  +LKTAE SIKK  N V+++                                   
Sbjct: 187 LTKLPGMLKTAEESIKKNSNHVMVM-------------------HKRKPNNKKSGPAKDA 227

Query: 225 PCHHCGKMGHWRRNCKSYLESLKDKREKEKLATPSTSGMFMIEINTAFND-NTWVLDTGC 49
            C  C + GHW+RNCK YLE LK K++  K    STSG+ +IEIN A +  ++WV DTG 
Sbjct: 228 ECFFCKEAGHWKRNCKKYLEQLKQKQQDGK---SSTSGINVIEINLATSSTDSWVFDTGS 284

Query: 48  GSHICTKMQGLKSSR 4
            +HIC  +QGLK SR
Sbjct: 285 VAHICKSLQGLKRSR 299


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  239 bits (609), Expect = 4e-60
 Identities = 134/320 (41%), Positives = 181/320 (56%), Gaps = 6/320 (1%)
 Frame = -2

Query: 945  TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
            +  NLR ILE  KL+ +N +DWYRNLRIVLR E   +V+  P            +   H+
Sbjct: 99   SNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHE 158

Query: 765  KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
            +   +     C+MLA+MSPELQ+Q+E +DA +IIT L+ +F+ QAR ER+  SK LF  +
Sbjct: 159  RRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 218

Query: 585  MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
            + EG  V+ H  +M+G  E L +LGF +  EL+ DL+LQSLP SF  F+MN+ MN +  T
Sbjct: 219  LAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 278

Query: 405  LPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 226
            L EL  +LKTAE SIKK  N V+++                                  G
Sbjct: 279  LAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTG 338

Query: 225  P-----CHHCGKMGHWRRNCKSYLESLKDKREKEKLATPSTSGMFMIEINTAFND-NTWV 64
            P     C    + GHW+RNCK YLE LK K++  K    STSG+ +IEIN A +  ++WV
Sbjct: 339  PAKDAECFFYKETGHWKRNCKKYLEQLKQKQQDGK---SSTSGINVIEINLATSSTDSWV 395

Query: 63   LDTGCGSHICTKMQGLKSSR 4
             DTG  +HIC  +QGLK SR
Sbjct: 396  FDTGSVAHICKSLQGLKRSR 415


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  239 bits (609), Expect = 4e-60
 Identities = 134/320 (41%), Positives = 181/320 (56%), Gaps = 6/320 (1%)
 Frame = -2

Query: 945  TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
            +  NLR ILE  KL+ +N +DWYRNLRIVLR E   +V+  P            +   H+
Sbjct: 99   SNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHE 158

Query: 765  KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
            +   +     C+MLA+MSPELQ+Q+E +DA +IIT L+ +F+ QAR ER+  SK LF  +
Sbjct: 159  RRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 218

Query: 585  MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
            + EG  V+ H  +M+G  E L +LGF +  EL+ DL+LQSLP SF  F+MN+ MN +  T
Sbjct: 219  LAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 278

Query: 405  LPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 226
            L EL  +LKTAE SIKK  N V+++                                  G
Sbjct: 279  LAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTG 338

Query: 225  P-----CHHCGKMGHWRRNCKSYLESLKDKREKEKLATPSTSGMFMIEINTAFND-NTWV 64
            P     C    + GHW+RNCK YLE LK K++  K    STSG+ +IEIN A +  ++WV
Sbjct: 339  PAKDAECFFYKETGHWKRNCKKYLEQLKQKQQDGK---SSTSGINVIEINLATSSTDSWV 395

Query: 63   LDTGCGSHICTKMQGLKSSR 4
             DTG  +HIC  +QGLK SR
Sbjct: 396  FDTGSVAHICKSLQGLKRSR 415


>gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 277

 Score =  237 bits (605), Expect = 1e-59
 Identities = 123/254 (48%), Positives = 162/254 (63%), Gaps = 6/254 (2%)
 Frame = -2

Query: 855 RSEKILYVIEGPIXXXXXXXXXXXEHETHKKYKDDSDTAQCIMLASMSPELQKQHEHMDA 676
           + EK  YVI+ PI           + E ++ +KDD D A C+MLASM+ ELQKQHEHMD 
Sbjct: 21  KEEKKSYVIDTPIPPVPVADASAEDKEAYQCHKDDDDQAACMMLASMTLELQKQHEHMDV 80

Query: 675 RSIITHLKEIFDKQARTERYEISKQLFRSKMVEGTSVATHGFRMLGLIEQLGQLGFVMDH 496
           +S+I HL+E+FD++ R ERYEISK+LFR KM EG+SV  H  +M+GLIE+L QLG  MDH
Sbjct: 81  QSMILHLRELFDREGRIERYEISKELFRCKMAEGSSVRPHVLKMIGLIERLRQLGLAMDH 140

Query: 495 ELSVDLVLQSLPDSFAQFVMNYQMNKIETTLPELINLLKTAENSIKKEKNAVLLVDXXXX 316
           ELS+DLVLQSLPDSF+QF++N+ MN++E TLPEL+N+L TA+ SI+K+K ++LL+     
Sbjct: 141 ELSIDLVLQSLPDSFSQFMLNFHMNRLEATLPELLNMLDTAKRSIRKDKGSLLLLSFSKA 200

Query: 315 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGP------CHHCGKMGHWRRNCKSYLESLKD 154
                                                CHHCGK+GHWRRNCK YL ++  
Sbjct: 201 HTKQQKKKAQKGKKVKSQNEKALKPKGGVKKDKETDICHHCGKLGHWRRNCKEYLATVS- 259

Query: 153 KREKEKLATPSTSG 112
             +K+KL   S SG
Sbjct: 260 --KKKKLIEVSDSG 271


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  237 bits (604), Expect = 2e-59
 Identities = 130/321 (40%), Positives = 185/321 (57%), Gaps = 7/321 (2%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           +T NLRSILE  KL+ +NF+DWYRNLRIVL+ E+  YV+E P                 +
Sbjct: 8   STFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATATARRGFE 67

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           K+ +D+    C+MLA+MSPELQKQ+E  DA + I  L+ +F+ QAR ER+  SK LF  +
Sbjct: 68  KHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNTSKSLFACR 127

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           +VEG  V+ H  +M+G IE L +LGF +  EL+ D++LQSLP SF  F++NY MN ++ T
Sbjct: 128 LVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMDRT 187

Query: 405 LPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 226
           L EL  +LKT E SI+K  + V+++                                  G
Sbjct: 188 LAELHGMLKTVEESIQKNGHHVMMMQNAKRKPPVKKLCTKRKLTPDEIASASNAKKGKKG 247

Query: 225 P------CHHCGKMGHWRRNCKSYLESLKDKREKEKLATPSTSGMFMIEINTAFN-DNTW 67
                  C +C + GHW+RNCK Y+E LK K+     +T S SG+ +I+IN A +  ++W
Sbjct: 248 SAASDAVCFYCKETGHWKRNCKKYMEDLKKKQ-----STTSASGINVIDINLATSPTDSW 302

Query: 66  VLDTGCGSHICTKMQGLKSSR 4
           V DTG  +H C  +QG++ SR
Sbjct: 303 VFDTGSVAHSCKSLQGMRRSR 323


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  227 bits (578), Expect = 2e-56
 Identities = 130/328 (39%), Positives = 185/328 (56%), Gaps = 8/328 (2%)
 Frame = -2

Query: 960  ICIMSTTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXE 781
            I + +++  LRSIL+  KL+ +NF DW RNLRIVLR +K  +V+E PI            
Sbjct: 89   IAVPTSSFALRSILKKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPADNAAATL 148

Query: 780  HETHKKYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQ 601
               +KK  D+S    C+MLA+M+ +LQKQ E+++A  +I  LK +F+ QART+R+EISK 
Sbjct: 149  KSAYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTKRFEISKN 208

Query: 600  LFRSKMVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMN 421
            LF  K+ EG+ V+ H  +M+G  + L +LGF +  EL+ DL+L SLP S+ QF++N+ MN
Sbjct: 209  LFSCKLAEGSPVSPHMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQFILNFHMN 268

Query: 420  KIETTLPELINLLKTAENSIKKEKNAVLLVD-------XXXXXXXXXXXXXXXXXXXXXX 262
             ++  L EL  LLKTAE+SIKK  + V++V                              
Sbjct: 269  GLDKNLTELHMLLKTAEDSIKKINSHVMMVQKSTSFKKKARTWVKGKGKKVLDGIQTNKP 328

Query: 261  XXXXXXXXXXXGPCHHCGKMGHWRRNCKSYLESLKDKREKEKLATPSTSGMFMIEINTAF 82
                         C +C + GHW+RNCK YL  LK    K     PSTSG+ +I++  A 
Sbjct: 329  KLKTKSGPTQENECFYCKEPGHWKRNCKKYLADLK----KNGGTKPSTSGINVIDVLLAD 384

Query: 81   ND-NTWVLDTGCGSHICTKMQGLKSSRR 1
            +  N+WV DTG  +HIC  MQ L  +RR
Sbjct: 385  SSVNSWVFDTGSVAHICNSMQSLTKNRR 412


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  209 bits (533), Expect = 3e-51
 Identities = 114/278 (41%), Positives = 156/278 (56%), Gaps = 5/278 (1%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           +  NLRSILE  KL+ +NF+DWYRNLRIVLR E   +++  P            +   H+
Sbjct: 84  SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFLLIQPFPADLPNNAPAAQRRKHE 143

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           +  +D     C+MLA+MSPELQ Q+E +DA +IIT L+ +F+ QAR ER+  SK LF  +
Sbjct: 144 RRCNDYLDISCLMLATMSPELQSQYEALDAHTIITGLRNMFEDQARAERFNTSKFLFAYR 203

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           + +G  V+ H  +M+G  E L +LGF +  EL+ DL+LQSLP SF  F+MN+ MN +  T
Sbjct: 204 LAQGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 263

Query: 405 LPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 226
           L EL  +LKTAE SIKK  N V+++                                  G
Sbjct: 264 LAELHGMLKTAEESIKKNSNYVMVMHKLKPNNKKSGQKRKLNSDEITSTSNCKTKVQKTG 323

Query: 225 P-----CHHCGKMGHWRRNCKSYLESLKDKREKEKLAT 127
           P     C  C + GHW+RNCK YLE LK K++  K +T
Sbjct: 324 PAKDAECFFCKETGHWKRNCKKYLEQLKQKQQDGKSST 361


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  207 bits (528), Expect = 1e-50
 Identities = 114/278 (41%), Positives = 156/278 (56%), Gaps = 5/278 (1%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           ++ NLRSILE  KL+ +NF+DWYRNLRIVLR E   +V+               +   H+
Sbjct: 86  SSFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTESFPANLPNNALAAQRREHE 145

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           K  +D     C+MLA+MSPELQ+Q+E +DA +IIT L+ +F+ QAR ER+  SK LF  +
Sbjct: 146 KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 205

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           + EG  V+ H  +++G  E L +LGF +  EL+ DL+LQSLP SF  F+MN+ MN +  T
Sbjct: 206 LAEGNPVSPHVIKIIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 265

Query: 405 LPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 226
           L EL  +LKTAE SIKK  N V+++                                  G
Sbjct: 266 LAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTG 325

Query: 225 P-----CHHCGKMGHWRRNCKSYLESLKDKREKEKLAT 127
           P     C    + GHW+RNCK YLE LK K++  K +T
Sbjct: 326 PAKDAECFFYKETGHWKRNCKKYLEQLKQKQQDGKSST 363


>ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
           gi|557538517|gb|ESR49561.1| hypothetical protein
           CICLE_v10033628mg, partial [Citrus clementina]
          Length = 263

 Score =  202 bits (513), Expect = 6e-49
 Identities = 115/261 (44%), Positives = 155/261 (59%)
 Frame = -2

Query: 933 LRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHKKYKD 754
           L  ILE  +L+  N++DW+RNLRI+L  EKI YV++ P            E  T++K++D
Sbjct: 9   LARILENYRLTGPNYVDWFRNLRIILNYEKISYVLDTPKPNEIPEGTSEAERVTYQKWQD 68

Query: 753 DSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSKMVEG 574
           D  +A+  +LASMS ELQ+QHE+M           ++ +Q+RT RYEISK+LFR +M EG
Sbjct: 69  DDLSAKSYILASMSNELQRQHENMP---------NLYSEQSRTVRYEISKKLFRMRMTEG 119

Query: 573 TSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETTLPEL 394
            SV  H  +M+  IEQL  L F MD EL++DL+LQSLPDSF+QF+MN+ MNK+E +L EL
Sbjct: 120 -SVNEHVLKMIDYIEQLEALNFSMDGELAIDLILQSLPDSFSQFIMNFNMNKMECSLAEL 178

Query: 393 INLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPCHH 214
           + +L TAE  IKK K+ + +                                   G C H
Sbjct: 179 LKMLNTAETCIKKPKDVMAI---EGSSAKKGKKKKFQPKAKGGIKKGKANKPNDKGKCFH 235

Query: 213 CGKMGHWRRNCKSYLESLKDK 151
           CGK GHW+RNCK+YL SLK K
Sbjct: 236 CGKDGHWKRNCKAYLNSLKVK 256


>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550176|gb|ABA92973.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 591

 Score =  202 bits (513), Expect = 6e-49
 Identities = 112/278 (40%), Positives = 154/278 (55%), Gaps = 5/278 (1%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           +  NLRSILE  KL+ +NF+DWY NLRIVLR E   +V+  P            +   H+
Sbjct: 29  SNFNLRSILEKEKLTGTNFMDWYHNLRIVLRQEHKEFVLTQPFLADLPNNAPATQRREHE 88

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           +  ++     C+MLA+MS +LQ+Q+E +DA +IIT L+ +F+ QAR ER+  SK LF  +
Sbjct: 89  RRCNEYLDISCLMLATMSLKLQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 148

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           + EG  V+ H  +M+G  E L +LGF +  EL+ DL+LQSLP SF  F+MN+ MN +  T
Sbjct: 149 LAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 208

Query: 405 LPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 226
           L EL   LKTAE SIKK  N V+ +                                  G
Sbjct: 209 LAELHVTLKTAEESIKKNSNHVMGMHKRKPNNKKSGQKRKLNSDEITTTSNSKTKVQKTG 268

Query: 225 P-----CHHCGKMGHWRRNCKSYLESLKDKREKEKLAT 127
           P     C  C ++GHW+RNCK YLE LK K++  K +T
Sbjct: 269 PAKDAECFICKEIGHWKRNCKKYLEQLKQKQQDGKSST 306


>emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]
          Length = 276

 Score =  198 bits (503), Expect = 8e-48
 Identities = 109/272 (40%), Positives = 153/272 (56%), Gaps = 5/272 (1%)
 Frame = -2

Query: 948 STTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETH 769
           S++ NLRSILE  KL+ +NF+DWYRNLRIVLR E   +V+E P                H
Sbjct: 8   SSSFNLRSILEKEKLNGTNFVDWYRNLRIVLRQEHKEFVLEEPFPTDLPNNATAARRREH 67

Query: 768 KKYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRS 589
           +K  ++     C+ML ++SPE Q+Q++ +DA +IIT L  +F+ QAR ER+  SK LF  
Sbjct: 68  EKRCNEYLDISCLMLVTISPEFQRQYQTLDAHTIITRLCNMFEYQARAERFNTSKSLFAC 127

Query: 588 KMVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIET 409
           ++ EG +V+ +  +M+G  E L +LGF +  EL++DL+LQSLP SF  F+MN+ M++   
Sbjct: 128 RLAEGNAVSPNVIKMIGYTESLEKLGFPLSKELAIDLILQSLPPSFKPFIMNFNMDR--- 184

Query: 408 TLPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 229
           TL EL  +LKTAE SIKK  N V+++                                  
Sbjct: 185 TLAELHGMLKTAEESIKKNSNYVMVMHKCKPNNKKSGQKRKLNSDEITSTSNSKTKVQKT 244

Query: 228 GP-----CHHCGKMGHWRRNCKSYLESLKDKR 148
           GP     C  C + GHW+RNCK YLE  K K+
Sbjct: 245 GPAKDAECFFCKETGHWKRNCKKYLEQFKQKQ 276


>ref|XP_006587404.1| PREDICTED: uncharacterized protein LOC102662010, partial [Glycine
           max]
          Length = 277

 Score =  195 bits (495), Expect = 7e-47
 Identities = 110/271 (40%), Positives = 157/271 (57%), Gaps = 4/271 (1%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           ++L+LR ILE  KL  +N+ DWYRNLRIVL  EK++  I+ P              +  +
Sbjct: 2   SSLSLRGILEPGKLVRANYDDWYRNLRIVLMHEKLIDTIDKP-PMEAPDLSDAEATKVFQ 60

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           KY D+  TA+CI+LASMS ELQ+QH+ MD   I+ HLK+++  Q+R  R+++SK LFRS 
Sbjct: 61  KYLDECLTAKCIILASMSSELQRQHQDMDPYEIVEHLKKMYGGQSRMTRFQLSKALFRSS 120

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           +    +V  H  +M+ LIEQL +LG  +  ELS DL++QSL DSF+QF++N+ MNKI   
Sbjct: 121 LAANENVGPHVLKMIDLIEQLEKLGCTLGKELSQDLIMQSLSDSFSQFIVNFNMNKISCD 180

Query: 405 LPELINLLKTAENSI--KKEKNAVLLV--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 238
           L E++NLL   EN I  KK+K  V++V  +                              
Sbjct: 181 LHEMLNLLIDYENQIASKKKKGTVMVVGNNSKKKGKVPKRKNLGPKGGMTKPMNKRNKID 240

Query: 237 XXXGPCHHCGKMGHWRRNCKSYLESLKDKRE 145
                C    + GHW+RNCK YL+SLK+K++
Sbjct: 241 QTDAECFFYKEKGHWKRNCKKYLDSLKNKKQ 271


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  195 bits (495), Expect = 7e-47
 Identities = 111/292 (38%), Positives = 160/292 (54%), Gaps = 8/292 (2%)
 Frame = -2

Query: 954 IMSTTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHE 775
           + +++  LRSILE  KL+ +NF DW RNLRIVLR +K  +V+E PI              
Sbjct: 8   VPTSSFALRSILEKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPTENAAAAIKT 67

Query: 774 THKKYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLF 595
            +KK  D+S    C+MLA+M+ +LQKQ E+++A  +I  LK +F+ QARTER+EISK LF
Sbjct: 68  AYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTERFEISKNLF 127

Query: 594 RSKMVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKI 415
             K+ EG  V+ H  +M+G  + L +LGF +  EL+ DL+L SLP+S+ QF++N+ MN +
Sbjct: 128 GCKLAEGGPVSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNGL 187

Query: 414 ETTLPELINLLKTAENSIKKEKNAVLLVD--------XXXXXXXXXXXXXXXXXXXXXXX 259
           +  L EL  +LKTAE S+KK  N V++V                                
Sbjct: 188 DKNLTELHMMLKTAEGSVKKCNNHVIMVQKSTSFKKKAKTWIKKKGKAKVSDKIQTDKPK 247

Query: 258 XXXXXXXXXXGPCHHCGKMGHWRRNCKSYLESLKDKREKEKLATPSTSGMFM 103
                       C +C ++GHW+RNCK YL   K    +      ST+G F+
Sbjct: 248 TKTKSGPTQENECFYCKELGHWKRNCKKYLADQK----RNGGTKTSTTGEFL 295


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  193 bits (490), Expect = 3e-46
 Identities = 105/259 (40%), Positives = 143/259 (55%), Gaps = 5/259 (1%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           +  NLRSILE  KL+ +NF+DWYRNLRIVLR E   +V+  P            +   H+
Sbjct: 74  SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHE 133

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           K  +D     C+MLA+MSPELQ+Q+E +DA +IIT L+ +F+ QAR ER+  SK LF  +
Sbjct: 134 KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 193

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           + EG  V+ H  +M+G  E L +LGF +  EL+ DL+LQSLP SF  F+MN+ MN +  T
Sbjct: 194 LAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 253

Query: 405 LPELINLLKTAENSIKKEKNAVLLV-----DXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241
           L EL  +LKTAE SIKK  N V+++     +                             
Sbjct: 254 LAELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTSNSKTKVQKTG 313

Query: 240 XXXXGPCHHCGKMGHWRRN 184
                 C  C + GHW+RN
Sbjct: 314 SAKDAECFFCKETGHWKRN 332


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score =  193 bits (490), Expect = 3e-46
 Identities = 121/315 (38%), Positives = 160/315 (50%), Gaps = 1/315 (0%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           ++ NLRSILE  KL+ +NF+DWY NLRIVLR E   +V+  P            +   HK
Sbjct: 7   SSFNLRSILEKEKLTGTNFMDWYGNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHK 66

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           K  +D     C+MLA+MSPELQ+Q+E +DA +IIT L+ +F+ QAR ER+  SK LF  +
Sbjct: 67  KQCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 126

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           + E                                 V  SLP SF  F+MN+ M  +  T
Sbjct: 127 LAE---------------------------------VNPSLPPSFEPFIMNFNMKNLNRT 153

Query: 405 LPELINLLKTAENSIKKEKNAVLLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 226
           L EL  +LKTAE SIKK  N V+++                                  G
Sbjct: 154 LIELHGMLKTAEESIKKNSNHVMVMHKRKPNNKKSGQKRKLNSDEITSTRNSKTKVQKTG 213

Query: 225 PCHHCGKMGHWRRNCKSYLESLKDKREKEKLATPSTSGMFMIEINTAFND-NTWVLDTGC 49
           P     + GHW+RNCK YLE LK K++  K    STSG+ +IEIN A +  ++WV DTG 
Sbjct: 214 PAK---ETGHWKRNCKKYLEQLKQKQQNGK---SSTSGINVIEINLATSSTDSWVFDTGL 267

Query: 48  GSHICTKMQGLKSSR 4
            +HIC  +QGLK SR
Sbjct: 268 VAHICKSLQGLKRSR 282


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  192 bits (488), Expect = 4e-46
 Identities = 98/205 (47%), Positives = 133/205 (64%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           +  NLRSILE  KL+ +NF+DWYRNLRIVLR E   +V+  P            +   H+
Sbjct: 7   SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHE 66

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           K  +D     C+MLA+MSPELQ+Q+E +DA +IIT L+ +F+ QAR ER+  SK LF  +
Sbjct: 67  KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 126

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           + EG  V+ H  +M+G  E L +LGF +  EL+ DL+LQSLP SF  F+MN+ MN +  T
Sbjct: 127 LAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 186

Query: 405 LPELINLLKTAENSIKKEKNAVLLV 331
           L EL  +LKTAE SIKK  N V+++
Sbjct: 187 LAELHGMLKTAEESIKKNSNHVMVM 211


>ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759138 [Setaria italica]
          Length = 272

 Score =  187 bits (475), Expect = 1e-44
 Identities = 105/267 (39%), Positives = 144/267 (53%), Gaps = 8/267 (2%)
 Frame = -2

Query: 924 ILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHKKYKDDSD 745
           +LE  KL+ +NF+DWY NLRIV R EK  YV+E P                ++K+ DD+ 
Sbjct: 1   MLEKEKLNGTNFIDWYCNLRIVFRQEKTEYVLEQPYPDDPLVDANAAARRAYQKHCDDA- 59

Query: 744 TAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSKMVEGTSV 565
              C+MLA+M  +LQKQ+EH+DA ++I  L+ IF+ Q R ERY ISK LF  K+ EG+SV
Sbjct: 60  -LNCLMLATMFLDLQKQYEHVDAHTMIEGLRGIFENQVRAERYNISKSLFACKLAEGSSV 118

Query: 564 ATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETTLPELINL 385
           + +  +++G IE L +LGF +   L++D++LQ L  S+  F++NYQMN +E TL EL  +
Sbjct: 119 SPYVIKIIGYIETLDKLGFELKDHLAIDIILQLLTMSYKPFILNYQMNGMEKTLLELHGM 178

Query: 384 LKTAENSIKKEKNAVLLVD--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 229
           LK A+ SIKK    V++V                                          
Sbjct: 179 LKIAKESIKKNPTHVMMVQKENKKRKRWTPPKGKGKGKVVPNEPPSSKPKRKGKSSPSPD 238

Query: 228 GPCHHCGKMGHWRRNCKSYLESLKDKR 148
             C HC   GHW RNCK YLE  K KR
Sbjct: 239 DECFHCHLKGHWSRNCKKYLEDKKKKR 265


>ref|XP_006386829.1| hypothetical protein POPTR_0002s22700g [Populus trichocarpa]
           gi|550345621|gb|ERP64626.1| hypothetical protein
           POPTR_0002s22700g [Populus trichocarpa]
          Length = 171

 Score =  179 bits (455), Expect = 3e-42
 Identities = 83/164 (50%), Positives = 122/164 (74%)
 Frame = -2

Query: 870 LRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHKKYKDDSDTAQCIMLASMSPELQKQH 691
           +RI+++ EK +Y++E PI               H+++ DD +   C+MLA +S ++Q+QH
Sbjct: 1   MRIIIKQEKRMYILENPILNAPFEDVGEEFRNEHERHVDDDEQTACVMLAIISYKIQRQH 60

Query: 690 EHMDARSIITHLKEIFDKQARTERYEISKQLFRSKMVEGTSVATHGFRMLGLIEQLGQLG 511
           E+M+A +II HLKE+FD+ +RT RY+ SK+LFR KM +G+S+ TH  +M G IE+L QLG
Sbjct: 61  ENMNAYTIIMHLKELFDETSRTNRYQTSKELFRCKMTKGSSMNTHVLKMNGYIEKLEQLG 120

Query: 510 FVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETTLPELINLLK 379
           FVMD +LSV+LVLQSLP +F+QF+MNY MNK+++TLPEL N+L+
Sbjct: 121 FVMDRKLSVELVLQSLPQNFSQFIMNYHMNKLDSTLPELFNMLR 164


>gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Japonica Group]
           gi|108709282|gb|ABF97077.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 262

 Score =  178 bits (451), Expect = 9e-42
 Identities = 91/205 (44%), Positives = 130/205 (63%)
 Frame = -2

Query: 945 TTLNLRSILETNKLSESNFLDWYRNLRIVLRSEKILYVIEGPIXXXXXXXXXXXEHETHK 766
           ++ NLRSILE  +L+ +NF+DWY NL IVLR E   +V+  P            +   H+
Sbjct: 7   SSFNLRSILEKEELTGTNFMDWYCNLGIVLRQEHKEFVLTQPFPADLPNNAPVAQRSEHE 66

Query: 765 KYKDDSDTAQCIMLASMSPELQKQHEHMDARSIITHLKEIFDKQARTERYEISKQLFRSK 586
           K  +D     C+MLA+MSPE Q+Q+E +DA +IIT L+ +F+ QAR ER+   K LF  +
Sbjct: 67  KRCNDYLDISCLMLATMSPEFQRQYEALDAHTIITGLRNMFEDQARAERFNTLKSLFACR 126

Query: 585 MVEGTSVATHGFRMLGLIEQLGQLGFVMDHELSVDLVLQSLPDSFAQFVMNYQMNKIETT 406
           + EG  V+ H  +M+G  E L +LG  +  EL+ DL+LQSLP SF  F+MN+ MN + ++
Sbjct: 127 LAEGNPVSLHVIKMIGYTESLDKLGCPLSRELATDLILQSLPPSFEPFIMNFNMNNLNSS 186

Query: 405 LPELINLLKTAENSIKKEKNAVLLV 331
           L EL  +LKTAE SIKK  N V+++
Sbjct: 187 LAELHGMLKTAEESIKKNSNHVMVM 211