BLASTX nr result

ID: Rauwolfia21_contig00029563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00029563
         (274 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519724.1| chlorophyll A/B binding protein, putative [R...   186   3e-45
ref|XP_002524616.1| chlorophyll A/B binding protein, putative [R...   185   6e-45
gb|AFC91647.1| chloroplast chlorophyll A/B binding protein [Heve...   181   1e-43
gb|ACN41907.1| chlorophyll A/B binding protein [Gardenia jasmino...   181   1e-43
ref|XP_002316737.1| Chlorophyll a-b binding protein 2 [Populus t...   176   2e-42
gb|ACD64978.1| chloroplast chlorophyll a/b-binding protein [Ophi...   174   1e-41
dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein...   173   2e-41
sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding pro...   173   2e-41
ref|XP_004164941.1| PREDICTED: chlorophyll a-b binding protein 4...   172   3e-41
ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 4...   172   3e-41
gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Cana...   172   4e-41
ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1...   171   7e-41
ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1...   171   7e-41
gb|EMJ13068.1| hypothetical protein PRUPE_ppa010099mg [Prunus pe...   171   1e-40
gb|EMJ13063.1| hypothetical protein PRUPE_ppa010081mg [Prunus pe...   171   1e-40
gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pach...   171   1e-40
gb|AEO51755.1| chloroplast chlorophyll A/B binding protein [Dimo...   170   2e-40
gb|ACR08639.1| chloroplast chlorophyll A/B binding protein [Mang...   170   2e-40
dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein...   170   2e-40
dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein...   170   2e-40

>ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223541141|gb|EEF42697.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  186 bits (472), Expect = 3e-45
 Identities = 86/91 (94%), Positives = 88/91 (96%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGKAVKLSPSAPELMGNGRVSMR+   +SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 13  FAGKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 103


>ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223536169|gb|EEF37824.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  185 bits (469), Expect = 6e-45
 Identities = 85/91 (93%), Positives = 88/91 (96%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGKAVKLSPSAPELMGNGRVSMR+   ++VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 13  FAGKAVKLSPSAPELMGNGRVSMRKTAAKNVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 103


>gb|AFC91647.1| chloroplast chlorophyll A/B binding protein [Hevea brasiliensis]
          Length = 265

 Score =  181 bits (458), Expect = 1e-43
 Identities = 83/91 (91%), Positives = 87/91 (95%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGKAVKL+PSAP LMGN RVSMR++ G+ VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 13  FAGKAVKLTPSAPGLMGNARVSMRKSVGKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 103


>gb|ACN41907.1| chlorophyll A/B binding protein [Gardenia jasminoides]
          Length = 264

 Score =  181 bits (458), Expect = 1e-43
 Identities = 85/91 (93%), Positives = 88/91 (96%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAG+AVKLSPSAPELMGNGR+SM+R T R VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 13  FAGQAVKLSPSAPELMGNGRISMKRTT-RPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 71

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 102


>ref|XP_002316737.1| Chlorophyll a-b binding protein 2 [Populus trichocarpa]
           gi|222859802|gb|EEE97349.1| Chlorophyll a-b binding
           protein 2 [Populus trichocarpa]
          Length = 264

 Score =  176 bits (447), Expect = 2e-42
 Identities = 84/91 (92%), Positives = 87/91 (95%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGKAVKLSPS+PELMGNGRVSMR+ T + VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 13  FAGKAVKLSPSSPELMGNGRVSMRKTT-KPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 71

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHSR 102


>gb|ACD64978.1| chloroplast chlorophyll a/b-binding protein [Ophiopogon japonicus]
          Length = 264

 Score =  174 bits (441), Expect = 1e-41
 Identities = 84/91 (92%), Positives = 88/91 (96%), Gaps = 1/91 (1%)
 Frame = +1

Query: 4   AGKAVKLSPS-APELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           AGKAVKL+PS A ELMGNGR+SMR+ TG+SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 13  AGKAVKLAPSPASELMGNGRISMRK-TGKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 71

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 102


>dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  173 bits (438), Expect = 2e-41
 Identities = 79/91 (86%), Positives = 84/91 (92%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAG+AVKLSPSAPE+ GNGRVSMR+   + V+S SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 13  FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 103


>sp|P27493.1|CB22_TOBAC RecName: Full=Chlorophyll a-b binding protein 21, chloroplastic;
           AltName: Full=LHCII type I CAB-21; Short=LHCP; Flags:
           Precursor gi|19823|emb|CAA36957.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 265

 Score =  173 bits (438), Expect = 2e-41
 Identities = 79/91 (86%), Positives = 84/91 (92%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAG+AVKLSPSAPE+ GNGRVSMR+   + V+S SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 13  FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 103


>ref|XP_004164941.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like,
           partial [Cucumis sativus]
          Length = 149

 Score =  172 bits (437), Expect = 3e-41
 Identities = 79/91 (86%), Positives = 85/91 (93%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGK VKL+PS+PEL GN RV+MR++  +SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 13  FAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSR 103


>ref|XP_004147416.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Cucumis sativus]
          Length = 265

 Score =  172 bits (437), Expect = 3e-41
 Identities = 79/91 (86%), Positives = 85/91 (93%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGK VKL+PS+PEL GN RV+MR++  +SVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 13  FAGKVVKLTPSSPELFGNSRVTMRKSATKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSR 103


>gb|AEQ67395.1| chloroplast chlorophyll A/B binding protein [Canarium album]
          Length = 264

 Score =  172 bits (436), Expect = 4e-41
 Identities = 82/91 (90%), Positives = 84/91 (92%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGKAVKLSPSAPELMGNGRV+MR+ T     SGSPWYGPDRVKYLGP SGEPPSYLTGE
Sbjct: 13  FAGKAVKLSPSAPELMGNGRVNMRK-TFNKPPSGSPWYGPDRVKYLGPLSGEPPSYLTGE 71

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 102


>ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score =  171 bits (434), Expect = 7e-41
 Identities = 78/91 (85%), Positives = 84/91 (92%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAG+AVKLSPSA E+ GNGR++MR+A  +S SS SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 13  FAGQAVKLSPSASEITGNGRITMRKAVAKSASSSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 103


>ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score =  171 bits (434), Expect = 7e-41
 Identities = 78/91 (85%), Positives = 84/91 (92%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAG+AVKLSPSA E+ GNGR++MR+A  +S SS SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 13  FAGQAVKLSPSASEITGNGRITMRKAVAKSASSSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 103


>gb|EMJ13068.1| hypothetical protein PRUPE_ppa010099mg [Prunus persica]
          Length = 264

 Score =  171 bits (432), Expect = 1e-40
 Identities = 79/91 (86%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGKAV+L+P A EL GNGRVSMR+   + VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 12  FAGKAVQLAPGATELFGNGRVSMRKTGAKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 71

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHSR 102


>gb|EMJ13063.1| hypothetical protein PRUPE_ppa010081mg [Prunus persica]
          Length = 265

 Score =  171 bits (432), Expect = 1e-40
 Identities = 79/91 (86%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGKAV+L+P A EL GNGRVSMR+   + VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 13  FAGKAVQLAPGATELFGNGRVSMRKTGAKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIH R
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHSR 103


>gb|ABD38707.1| chloroplast chlorophyll a/b binding protein [Pachysandra
           terminalis]
          Length = 267

 Score =  171 bits (432), Expect = 1e-40
 Identities = 82/92 (89%), Positives = 85/92 (92%), Gaps = 2/92 (2%)
 Frame = +1

Query: 4   AGKAVKLSPSAPELMGNGRVSMRRATGRS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTG 177
           AGKAVKL+PSA EL+G GRVSMR+  GR   VSSGSPWYGPDRVKYLGPFSGEPPSYLTG
Sbjct: 14  AGKAVKLAPSASELLGVGRVSMRKTGGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 73

Query: 178 EFPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCR 105


>gb|AEO51755.1| chloroplast chlorophyll A/B binding protein [Dimocarpus longan]
          Length = 263

 Score =  170 bits (431), Expect = 2e-40
 Identities = 79/91 (86%), Positives = 85/91 (93%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           F GKAV+L+P+  +LMGNGRV+MR+ TGR VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE
Sbjct: 12  FIGKAVQLAPTGNDLMGNGRVTMRK-TGRQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 70

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWD AGLSADPETFAKNRELEVIHCR
Sbjct: 71  FPGDYGWDAAGLSADPETFAKNRELEVIHCR 101


>gb|ACR08639.1| chloroplast chlorophyll A/B binding protein [Mangifera indica]
          Length = 264

 Score =  170 bits (431), Expect = 2e-40
 Identities = 81/91 (89%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAGKAVKLSP+  ELMGNGRVSMRR T +   SGSPWYGPDRVKYL PFSGEPPSYLTGE
Sbjct: 13  FAGKAVKLSPAPRELMGNGRVSMRR-TAKPTPSGSPWYGPDRVKYLSPFSGEPPSYLTGE 71

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 102


>dbj|BAA25391.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  170 bits (430), Expect = 2e-40
 Identities = 78/91 (85%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAG+AVKLSPSA E+ GNGRVSMR+   + V+S SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 13  FAGQAVKLSPSASEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGEAPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 103


>dbj|BAA25389.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  170 bits (430), Expect = 2e-40
 Identities = 78/91 (85%), Positives = 83/91 (91%)
 Frame = +1

Query: 1   FAGKAVKLSPSAPELMGNGRVSMRRATGRSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 180
           FAG+AVKLSPSA E+ GNGRVSMR+   + V+S SPWYGPDRVKYLGPFSGE PSYLTGE
Sbjct: 13  FAGQAVKLSPSASEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 181 FPGDYGWDTAGLSADPETFAKNRELEVIHCR 273
           FPGDYGWDTAGLSADPETFAKNRELEVIHCR
Sbjct: 73  FPGDYGWDTAGLSADPETFAKNRELEVIHCR 103


Top