BLASTX nr result
ID: Rauwolfia21_contig00029554
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00029554
(227 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002440164.1| hypothetical protein SORBIDRAFT_09g027090 [S... 74 3e-11
ref|XP_004966246.1| PREDICTED: transcription factor IIIB 90 kDa ... 70 3e-10
ref|XP_004966245.1| PREDICTED: transcription factor IIIB 90 kDa ... 70 3e-10
ref|XP_004966244.1| PREDICTED: transcription factor IIIB 90 kDa ... 70 3e-10
ref|XP_004966243.1| PREDICTED: transcription factor IIIB 90 kDa ... 70 3e-10
gb|AFW78951.1| hypothetical protein ZEAMMB73_136276 [Zea mays] 69 9e-10
gb|AFW78950.1| hypothetical protein ZEAMMB73_136276 [Zea mays] 69 9e-10
gb|ACN36651.1| unknown [Zea mays] gi|413946303|gb|AFW78952.1| hy... 69 9e-10
ref|NP_001141990.1| hypothetical protein [Zea mays] gi|194706710... 69 9e-10
gb|AFW80945.1| hypothetical protein ZEAMMB73_313717 [Zea mays] g... 68 1e-09
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ... 67 2e-09
emb|CBI31214.3| unnamed protein product [Vitis vinifera] 67 2e-09
gb|EMT11226.1| Transcription factor IIIB 70 kDa subunit [Aegilop... 67 3e-09
gb|ABR17974.1| unknown [Picea sitchensis] 67 3e-09
gb|EMT23867.1| Transcription factor IIIB 90 kDa subunit [Aegilop... 65 1e-08
ref|XP_002969557.1| hypothetical protein SELMODRAFT_410325 [Sela... 63 4e-08
ref|XP_003560745.1| PREDICTED: transcription factor IIIB 60 kDa ... 62 6e-08
ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa ... 59 7e-07
ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa ... 59 7e-07
ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa ... 59 9e-07
>ref|XP_002440164.1| hypothetical protein SORBIDRAFT_09g027090 [Sorghum bicolor]
gi|241945449|gb|EES18594.1| hypothetical protein
SORBIDRAFT_09g027090 [Sorghum bicolor]
Length = 579
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP+ +D GYICC CG++ Q+V+TEEPTFVKG GESRLAG+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTEEPTFVKGNTGESRLAGS 55
>ref|XP_004966246.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X4
[Setaria italica]
Length = 539
Score = 70.1 bits (170), Expect = 3e-10
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP+ +D GYICC CG++ ++++T+EPTFVK P G SRLAG+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDEEIYTDEPTFVKDPSGTSRLAGS 55
>ref|XP_004966245.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X3
[Setaria italica]
Length = 576
Score = 70.1 bits (170), Expect = 3e-10
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP+ +D GYICC CG++ ++++T+EPTFVK P G SRLAG+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDEEIYTDEPTFVKDPSGTSRLAGS 55
>ref|XP_004966244.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X2
[Setaria italica]
Length = 574
Score = 70.1 bits (170), Expect = 3e-10
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP+ +D GYICC CG++ ++++T+EPTFVK P G SRLAG+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDEEIYTDEPTFVKDPSGTSRLAGS 55
>ref|XP_004966243.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like isoform X1
[Setaria italica]
Length = 600
Score = 70.1 bits (170), Expect = 3e-10
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP+ +D GYICC CG++ ++++T+EPTFVK P G SRLAG+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDEEIYTDEPTFVKDPSGTSRLAGS 55
>gb|AFW78951.1| hypothetical protein ZEAMMB73_136276 [Zea mays]
Length = 148
Score = 68.6 bits (166), Expect = 9e-10
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP+ +D GYICC CG++ Q+V+T+EPTFVK G+SRLAG+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTDEPTFVKDNKGQSRLAGS 55
>gb|AFW78950.1| hypothetical protein ZEAMMB73_136276 [Zea mays]
Length = 425
Score = 68.6 bits (166), Expect = 9e-10
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP+ +D GYICC CG++ Q+V+T+EPTFVK G+SRLAG+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTDEPTFVKDNKGQSRLAGS 55
>gb|ACN36651.1| unknown [Zea mays] gi|413946303|gb|AFW78952.1| hypothetical protein
ZEAMMB73_136276 [Zea mays]
Length = 90
Score = 68.6 bits (166), Expect = 9e-10
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP+ +D GYICC CG++ Q+V+T+EPTFVK G+SRLAG+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTDEPTFVKDNKGQSRLAGS 55
>ref|NP_001141990.1| hypothetical protein [Zea mays] gi|194706710|gb|ACF87439.1| unknown
[Zea mays] gi|413946300|gb|AFW78949.1| hypothetical
protein ZEAMMB73_136276 [Zea mays]
Length = 580
Score = 68.6 bits (166), Expect = 9e-10
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP+ +D GYICC CG++ Q+V+T+EPTFVK G+SRLAG+
Sbjct: 1 MVYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTDEPTFVKDNKGQSRLAGS 55
>gb|AFW80945.1| hypothetical protein ZEAMMB73_313717 [Zea mays]
gi|413948297|gb|AFW80946.1| hypothetical protein
ZEAMMB73_313717 [Zea mays]
Length = 588
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
M++C +C CP+ +D GYICC CG++ Q+V+T+EPTFVK G+SRLAG+
Sbjct: 1 MIYCTHCADYCPSIKDPDKGYICCGTCGKVLDQEVYTDEPTFVKDNTGQSRLAGS 55
>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
vinifera]
Length = 529
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAG 6
MVWC NC RDC T+R +GY+CC CG++ QD F+ +P FVK G+S+++G
Sbjct: 1 MVWCTNCARDCRTER-LLNGYLCCTACGKVVDQDNFSNDPVFVKNAAGQSQMSG 53
>emb|CBI31214.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAG 6
MVWC NC RDC T+R +GY+CC CG++ QD F+ +P FVK G+S+++G
Sbjct: 1 MVWCTNCARDCRTER-LLNGYLCCTACGKVVDQDNFSNDPVFVKNAAGQSQMSG 53
>gb|EMT11226.1| Transcription factor IIIB 70 kDa subunit [Aegilops tauschii]
Length = 583
Score = 66.6 bits (161), Expect = 3e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAG 6
MV+C +C CP +D GYICC CG++ Q+++T+EPTFVK G SRLAG
Sbjct: 1 MVYCTHCADYCPYIKDPDKGYICCGTCGKVLDQEIYTDEPTFVKDSSGASRLAG 54
>gb|ABR17974.1| unknown [Picea sitchensis]
Length = 746
Score = 66.6 bits (161), Expect = 3e-09
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAG 6
MVWC C +D PT+RD +G+ICC CGR+ ++++ +PTFVK GG+S+ +G
Sbjct: 1 MVWCSYCGKDQPTERDDINGFICCTGCGRVLDDNIYSSDPTFVKTAGGQSQFSG 54
>gb|EMT23867.1| Transcription factor IIIB 90 kDa subunit [Aegilops tauschii]
Length = 337
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAG 6
MV+C +C DCP +D +G+ CC CG++ QD++TEEPTF K G+SRL G
Sbjct: 1 MVYCSHCDDDCPYVKDPDNGFTCCGMCGKVIDQDMYTEEPTFFKDSSGQSRLRG 54
>ref|XP_002969557.1| hypothetical protein SELMODRAFT_410325 [Selaginella moellendorffii]
gi|300163033|gb|EFJ29645.1| hypothetical protein
SELMODRAFT_410325 [Selaginella moellendorffii]
Length = 507
Score = 63.2 bits (152), Expect = 4e-08
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAG 6
MVWC C +D DRD +G+ CC CGR+ +V++ EPTF KG G+S+L G
Sbjct: 1 MVWCSYCAKDQIADRDDINGFTCCTGCGRVLDDNVYSSEPTFCKGSAGQSQLVG 54
>ref|XP_003560745.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like
[Brachypodium distachyon]
Length = 516
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MV+C +C CP +D GYICC CG++ QD++++EPTF+ G+SR+ GT
Sbjct: 1 MVYCTHCADYCPYIKDPDKGYICCGTCGKVLDQDIYSDEPTFISYGPGQSRVEGT 55
>ref|XP_006354652.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
tuberosum]
Length = 615
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MVWC NC +D PT +D G ICC CG++ +D F+ EPTFVK G+S+L+G+
Sbjct: 1 MVWCVNCAQDKPT-KDVE-GKICCSFCGKVLEEDNFSIEPTFVKNASGQSQLSGS 53
>ref|XP_004229719.1| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Solanum
lycopersicum]
Length = 615
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAGT 3
MVWC NC +D PT +D G ICC CG++ +D F+ EPTFVK G+S+L+G+
Sbjct: 1 MVWCVNCAQDKPT-KDVE-GKICCSFCGKVLEEDNFSIEPTFVKNASGQSQLSGS 53
>ref|XP_003578728.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like
[Brachypodium distachyon]
Length = 580
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = -1
Query: 167 MVWCPNCLRDCPTDRDFSSGYICCFECGRIHYQDVFTEEPTFVKGPGGESRLAG 6
M +C +C CP +D GYICC CG++ QD++ EPTFVK G+S+ AG
Sbjct: 1 MFYCTHCADYCPYIKDPDKGYICCGTCGKVLDQDIYNAEPTFVKDGLGQSQRAG 54