BLASTX nr result

ID: Rauwolfia21_contig00029544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00029544
         (746 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362027.1| PREDICTED: SNF2 domain-containing protein CL...    81   4e-13
ref|XP_004230870.1| PREDICTED: helicase ARIP4-like [Solanum lyco...    80   9e-13
ref|XP_002305447.2| hypothetical protein POPTR_0004s16640g [Popu...    75   2e-11
gb|EXC17234.1| Helicase ARIP4 [Morus notabilis]                        74   7e-11
ref|XP_002884170.1| defective in RNA-directed DNA methylation 1 ...    72   1e-10
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...    72   2e-10
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...    72   2e-10
ref|XP_006487355.1| PREDICTED: SNF2 domain-containing protein CL...    71   4e-10
ref|XP_006423382.1| hypothetical protein CICLE_v10027795mg [Citr...    71   4e-10
ref|NP_179232.1| putative chromatin remodeling protein [Arabidop...    70   7e-10
ref|XP_006409440.1| hypothetical protein EUTSA_v10022532mg [Eutr...    69   1e-09
ref|XP_002530324.1| ATP-dependent helicase, putative [Ricinus co...    69   1e-09
ref|XP_004289651.1| PREDICTED: DNA repair protein rhp54-like [Fr...    66   1e-08
gb|EMJ02614.1| hypothetical protein PRUPE_ppa001303mg [Prunus pe...    65   2e-08
gb|EOX97926.1| SNF2 domain-containing protein / helicase domain-...    65   2e-08
gb|EOX97924.1| SNF2 domain-containing protein / helicase domain-...    65   2e-08
emb|CBI15777.3| unnamed protein product [Vitis vinifera]               64   7e-08
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...    64   7e-08
ref|XP_006594408.1| PREDICTED: transcriptional regulator ATRX-li...    63   1e-07
ref|XP_006379256.1| hypothetical protein POPTR_0009s12350g [Popu...    63   1e-07

>ref|XP_006362027.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Solanum
           tuberosum]
          Length = 925

 Score = 80.9 bits (198), Expect = 4e-13
 Identities = 36/75 (48%), Positives = 54/75 (72%)
 Frame = -2

Query: 226 SKINEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHA 47
           +++ +DKGVYVG+EDDD++++   Q + G  DI   WNEM+ ALE SKD A +   ++H 
Sbjct: 239 AELEKDKGVYVGVEDDDEIDDGAEQPDEGLTDI---WNEMSFALEFSKDVAAEPSPDEHT 295

Query: 46  IEDAERCDHSFILKE 2
           +E+ + CDHSFILK+
Sbjct: 296 VEEEDECDHSFILKD 310


>ref|XP_004230870.1| PREDICTED: helicase ARIP4-like [Solanum lycopersicum]
          Length = 922

 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 37/75 (49%), Positives = 52/75 (69%)
 Frame = -2

Query: 226 SKINEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHA 47
           ++I  DKGVYVG+EDDD++++   Q + G  DI   WNEM+ ALE SKD A +   ++H 
Sbjct: 236 AEIETDKGVYVGVEDDDEIDDGAEQPDEGLTDI---WNEMSFALEFSKDVAAEPSPDEHT 292

Query: 46  IEDAERCDHSFILKE 2
            E+ + CDHSFILK+
Sbjct: 293 FEEEDECDHSFILKD 307


>ref|XP_002305447.2| hypothetical protein POPTR_0004s16640g [Populus trichocarpa]
           gi|550341178|gb|EEE85958.2| hypothetical protein
           POPTR_0004s16640g [Populus trichocarpa]
          Length = 912

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 13/123 (10%)
 Frame = -2

Query: 331 ESNKDKDVCVGFKDDE-EVEVENGQLDSCFD----------GLSKISKINEDKGVYVGME 185
           +S KDK V VG +DDE + E+++  L    +           L+      +DKGVYVG+E
Sbjct: 204 DSKKDKGVYVGVEDDEVDTEIKDDGLQVSDNVGRRIQGEAASLTGEPDSKKDKGVYVGVE 263

Query: 184 DDDQVEE--DNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIEDAERCDHSFI 11
           DD+   E  D+G        + +IW EM+ ALECSKD   +S ++++  ED + CDHSF+
Sbjct: 264 DDEVDTEIKDDG--------LGDIWKEMSFALECSKDVVENSPSDENMEEDEDYCDHSFV 315

Query: 10  LKE 2
           LK+
Sbjct: 316 LKD 318


>gb|EXC17234.1| Helicase ARIP4 [Morus notabilis]
          Length = 725

 Score = 73.6 bits (179), Expect = 7e-11
 Identities = 49/128 (38%), Positives = 67/128 (52%)
 Frame = -2

Query: 385 EEDNGQTGYDCEGLAKISESNKDKDVCVGFKDDEEVEVENGQLDSCFDGLSKISKINEDK 206
           E+D     +    L + S  +  KDV V    D    VE  +L          + IN D+
Sbjct: 157 EDDGPSYNFQNVFLNQPSGGSFIKDVEVRDPADRRARVEPIKLHG-----ETNADINRDR 211

Query: 205 GVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIEDAERC 26
           GVYVG+ED+   + +N   + G  D+   WNEM++ALE SKD AVD   ++   ED E C
Sbjct: 212 GVYVGVEDES--DSENSAEDGGLQDM---WNEMSMALEFSKDVAVDPSADEQVKEDEESC 266

Query: 25  DHSFILKE 2
           DHSFILK+
Sbjct: 267 DHSFILKD 274


>ref|XP_002884170.1| defective in RNA-directed DNA methylation 1 [Arabidopsis lyrata
           subsp. lyrata] gi|297330010|gb|EFH60429.1| defective in
           RNA-directed DNA methylation 1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 815

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 41/96 (42%), Positives = 58/96 (60%)
 Frame = -2

Query: 289 DEEVEVENGQLDSCFDGLSKISKINEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNE 110
           D+ + +ENG              +  +KGVYVG+EDDD   E     EA   D+ NIWNE
Sbjct: 264 DKVIAIENG--------------VANEKGVYVGVEDDDIDNES----EAADEDLGNIWNE 305

Query: 109 MAVALECSKDTAVDSLNEQHAIEDAERCDHSFILKE 2
           MA+++ECSKD A ++ ++Q A +  E C+HSFILK+
Sbjct: 306 MAMSIECSKDIAWETSHKQKA-DVVEDCEHSFILKD 340


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 37/75 (49%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
 Frame = -2

Query: 220 INEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSK--DTAVDSLNEQHA 47
           IN+DKGVY+G+E+D+  +E +GQ  +    + +IWN+M +ALECSK  D AVDS + Q  
Sbjct: 224 INKDKGVYIGVEEDE--DEVSGQANSEDDGLGDIWNDMQMALECSKDLDAAVDSSSNQPT 281

Query: 46  IEDAERCDHSFILKE 2
            ED + C+HSF+LK+
Sbjct: 282 TEDVD-CEHSFLLKD 295


>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 37/75 (49%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
 Frame = -2

Query: 220 INEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSK--DTAVDSLNEQHA 47
           IN+DKGVY+G+E+D+  +E +GQ  +    + +IWN+M +ALECSK  D AVDS + Q  
Sbjct: 224 INKDKGVYIGVEEDE--DEVSGQANSEDDGLGDIWNDMQMALECSKDLDAAVDSSSNQPT 281

Query: 46  IEDAERCDHSFILKE 2
            ED + C+HSF+LK+
Sbjct: 282 TEDVD-CEHSFLLKD 295


>ref|XP_006487355.1| PREDICTED: SNF2 domain-containing protein CLASSY 3-like isoform X1
           [Citrus sinensis] gi|568868100|ref|XP_006487356.1|
           PREDICTED: SNF2 domain-containing protein CLASSY 3-like
           isoform X2 [Citrus sinensis]
          Length = 892

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
 Frame = -2

Query: 220 INEDKGVYVGMEDDDQVE---EDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQH 50
           + +DKGVYVG+E DD  +   ED+G        + +IW EM++A+E SKD A D+ + +H
Sbjct: 207 VEKDKGVYVGVEGDDDNQKKAEDDG--------LGDIWQEMSMAMEISKDVAEDNSSAEH 258

Query: 49  AIEDAERCDHSFILKE 2
             EDA+ CDHSF+LK+
Sbjct: 259 MGEDADDCDHSFVLKD 274


>ref|XP_006423382.1| hypothetical protein CICLE_v10027795mg [Citrus clementina]
           gi|557525316|gb|ESR36622.1| hypothetical protein
           CICLE_v10027795mg [Citrus clementina]
          Length = 865

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
 Frame = -2

Query: 220 INEDKGVYVGMEDDDQVE---EDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQH 50
           + +DKGVYVG+E DD  +   ED+G        + +IW EM++A+E SKD A D+ + +H
Sbjct: 180 VEKDKGVYVGVEGDDDNQKKAEDDG--------LGDIWQEMSMAMEISKDVAEDNSSAEH 231

Query: 49  AIEDAERCDHSFILKE 2
             EDA+ CDHSF+LK+
Sbjct: 232 MGEDADDCDHSFVLKD 247


>ref|NP_179232.1| putative chromatin remodeling protein [Arabidopsis thaliana]
           gi|4544390|gb|AAD22300.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251398|gb|AEC06492.1|
           putative chromatin remodeling protein [Arabidopsis
           thaliana]
          Length = 888

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 35/70 (50%), Positives = 50/70 (71%)
 Frame = -2

Query: 211 DKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIEDAE 32
           +KGVYVG+E+DD   E     EA   D+ NIWNEMA+++ECSKD A ++ +++ A +  E
Sbjct: 214 EKGVYVGVEEDDSDNES----EAADEDLGNIWNEMALSIECSKDVARETSHKEKA-DVVE 268

Query: 31  RCDHSFILKE 2
            C+HSFILK+
Sbjct: 269 DCEHSFILKD 278


>ref|XP_006409440.1| hypothetical protein EUTSA_v10022532mg [Eutrema salsugineum]
           gi|557110602|gb|ESQ50893.1| hypothetical protein
           EUTSA_v10022532mg [Eutrema salsugineum]
          Length = 939

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
 Frame = -2

Query: 391 VVEEDNGQTGYDCEGLAKISESNKDKDVCV--GFKDDEEVEVENGQLDSCFDGLSKISKI 218
           V+  +NG   Y       + +++ DK + +  G   D+ V V   + D     LS  + +
Sbjct: 210 VLPIENGMVDYQS---VSVGQTSGDKVLAIEDGMVYDKSVTVGQTRRDRV---LSIENGV 263

Query: 217 NEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIED 38
             DKGVYVG+EDDD   E     EA   D+ +IWNEMA+++ CSKD A     ++  +ED
Sbjct: 264 ASDKGVYVGVEDDDSGNES----EAADEDLGSIWNEMAMSIVCSKDGASHKEPKEDEVED 319

Query: 37  AERCDHSFILKE 2
              C+HSFIL +
Sbjct: 320 ---CEHSFILMD 328


>ref|XP_002530324.1| ATP-dependent helicase, putative [Ricinus communis]
           gi|223530128|gb|EEF32040.1| ATP-dependent helicase,
           putative [Ricinus communis]
          Length = 1157

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
 Frame = -2

Query: 340 KISESNKDKDVCVGFKDD--EEVEVENGQLDSCFDGLSKISKINEDKGVYVGMEDDDQVE 167
           KIS + K+    +  +D+   +++ E+   D+    +  +S I  D  +Y  ME+   +E
Sbjct: 503 KISMAIKEDSQHISVEDNVLSKIDTEDDIQDTVGKRVKALS-IKVDDSMYTDMENAMAIE 561

Query: 166 EDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIEDAERCDHSFILKE 2
           EDN Q++     +A+IW EM  A+E SKD AVD        EDAE CDHSF+LK+
Sbjct: 562 EDNRQIDVEDDGLADIWKEMKFAIEYSKDFAVDPATYGCLEEDAEACDHSFVLKD 616


>ref|XP_004289651.1| PREDICTED: DNA repair protein rhp54-like [Fragaria vesca subsp.
           vesca]
          Length = 896

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
 Frame = -2

Query: 421 NANIGLEARYVVEEDNGQT-----GYDCEGLAKISESNKDKDVCVGFKDDEEVEVENGQL 257
           NA     A  +++ D  QT      Y  + +     S   KD+ +    ++    + G  
Sbjct: 153 NAPAASTAIVIIDSDEEQTEDQRPSYSFQEVFMTQPSYSFKDIILPQPSEQVFRKDPGVR 212

Query: 256 DSCFDGLSKISKINEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDT 77
           D   +     +  N+D GVYVG+ED++  E+D+G        + + W EM++A+E SKD 
Sbjct: 213 DQVEE-----TDTNKDPGVYVGVEDEESTEDDDG--------LGDAWMEMSMAIESSKDI 259

Query: 76  AVDSLNEQHAIEDAERCDHSFILKE 2
            VD L+E+   E    C+HSF+LK+
Sbjct: 260 TVDPLSEERTSEG--DCEHSFVLKD 282


>gb|EMJ02614.1| hypothetical protein PRUPE_ppa001303mg [Prunus persica]
          Length = 859

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
 Frame = -2

Query: 226 SKINEDKGVYVGMEDDDQ----VEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLN 59
           +KI  D GVYVG+EDDD      EED+G        + +IWNEM++ALE +KD  VD  +
Sbjct: 177 TKIKNDPGVYVGVEDDDNHQTDTEEDDG--------LGDIWNEMSMALESNKDVVVDPSS 228

Query: 58  E--QHAIEDAERCDHSFILKE 2
           E      ED + CDHSF+LK+
Sbjct: 229 EGMSDGGEDCD-CDHSFVLKD 248


>gb|EOX97926.1| SNF2 domain-containing protein / helicase domain-containing
           protein, putative isoform 3 [Theobroma cacao]
          Length = 894

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 34/73 (46%), Positives = 45/73 (61%)
 Frame = -2

Query: 220 INEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIE 41
           I +DKGVYVG+E+D        Q EA    + +IW EM++ALE SKD   D  + +   E
Sbjct: 216 IKKDKGVYVGVEEDVDT-----QTEAADDGLGDIWQEMSMALEFSKDGFEDPSSSERMSE 270

Query: 40  DAERCDHSFILKE 2
           D E CDHSF+LK+
Sbjct: 271 DEEDCDHSFVLKD 283


>gb|EOX97924.1| SNF2 domain-containing protein / helicase domain-containing
           protein, putative isoform 1 [Theobroma cacao]
           gi|508706029|gb|EOX97925.1| SNF2 domain-containing
           protein / helicase domain-containing protein, putative
           isoform 1 [Theobroma cacao] gi|508706031|gb|EOX97927.1|
           SNF2 domain-containing protein / helicase
           domain-containing protein, putative isoform 1 [Theobroma
           cacao]
          Length = 899

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 34/73 (46%), Positives = 45/73 (61%)
 Frame = -2

Query: 220 INEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIE 41
           I +DKGVYVG+E+D        Q EA    + +IW EM++ALE SKD   D  + +   E
Sbjct: 221 IKKDKGVYVGVEEDVDT-----QTEAADDGLGDIWQEMSMALEFSKDGFEDPSSSERMSE 275

Query: 40  DAERCDHSFILKE 2
           D E CDHSF+LK+
Sbjct: 276 DEEDCDHSFVLKD 288


>emb|CBI15777.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -2

Query: 208 KGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIEDAER 29
           KG YVG+EDD +  E N Q +    D+A++W E  +AL+ SKD AVD   E+   E  E 
Sbjct: 217 KGEYVGVEDDMEASEGNLQAKTKDDDLADMWQEFDLALQSSKDVAVDP--EEDGKEGEEE 274

Query: 28  CDHSFILKE 2
           C+HSF+LK+
Sbjct: 275 CEHSFVLKD 283


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
           vinifera]
          Length = 944

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -2

Query: 208 KGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIEDAER 29
           KG YVG+EDD +  E N Q +    D+A++W E  +AL+ SKD AVD   E+   E  E 
Sbjct: 257 KGEYVGVEDDMEASEGNLQAKTKDDDLADMWQEFDLALQSSKDVAVDP--EEDGKEGEEE 314

Query: 28  CDHSFILKE 2
           C+HSF+LK+
Sbjct: 315 CEHSFVLKD 323


>ref|XP_006594408.1| PREDICTED: transcriptional regulator ATRX-like [Glycine max]
          Length = 953

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 31/70 (44%), Positives = 47/70 (67%)
 Frame = -2

Query: 211 DKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIEDAE 32
           DKGVY+G+++ +  + D    +     + +IW EM++A+ECSKDT V+ L ++   ED E
Sbjct: 288 DKGVYIGVQEVEDHQGDTADDDG----LEDIWKEMSMAIECSKDTYVNPLPDEEVKED-E 342

Query: 31  RCDHSFILKE 2
            CDHSFILK+
Sbjct: 343 DCDHSFILKD 352


>ref|XP_006379256.1| hypothetical protein POPTR_0009s12350g [Populus trichocarpa]
           gi|550331580|gb|ERP57053.1| hypothetical protein
           POPTR_0009s12350g [Populus trichocarpa]
          Length = 905

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 33/73 (45%), Positives = 47/73 (64%)
 Frame = -2

Query: 220 INEDKGVYVGMEDDDQVEEDNGQLEAGCYDIANIWNEMAVALECSKDTAVDSLNEQHAIE 41
           I +DKGVYVG+E+D   E D G  + G   + +IW EM+ ALE SKD   +   +++  E
Sbjct: 182 ITKDKGVYVGVEED---EVDTGIEDDG---LGDIWKEMSFALESSKDVVENPQPDENMEE 235

Query: 40  DAERCDHSFILKE 2
           D + CDHSF+LK+
Sbjct: 236 DEDYCDHSFVLKD 248


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