BLASTX nr result
ID: Rauwolfia21_contig00029461
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00029461
(272 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 95 8e-18
gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 95 8e-18
gb|AFS41725.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 95 8e-18
gb|AEX60843.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 95 8e-18
gb|ABJ74187.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 94 1e-17
gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 94 2e-17
gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 94 2e-17
gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 94 2e-17
gb|AFS41748.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 93 4e-17
gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 93 4e-17
gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 92 7e-17
gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 92 9e-17
gb|AFS41753.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 91 1e-16
gb|AEX60842.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 91 1e-16
gb|AEX60839.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 91 1e-16
ref|XP_003581511.1| PREDICTED: ribulose bisphosphate carboxylase... 91 2e-16
ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase... 91 2e-16
gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 91 2e-16
ref|NP_176880.1| ribulose bisphosphate carboxylase small chain 1... 90 3e-16
ref|XP_006285820.1| hypothetical protein CARUB_v10007296mg [Caps... 90 3e-16
>gb|AFS41754.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium mustelinum]
Length = 179
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 133 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AFS41732.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366486|gb|AFS41740.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366528|gb|AFS41761.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 179
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 133 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AFS41725.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium raimondii]
Length = 179
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 133 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AEX60843.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366484|gb|AFS41739.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366500|gb|AFS41747.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366526|gb|AFS41760.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 179
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 133 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|ABJ74187.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Artemisia annua]
Length = 90
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQV+KEL+EAKKEYPNAFIRIIGFDNVRQVQCISFIA+KPPGY
Sbjct: 44 CTDSAQVMKELQEAKKEYPNAFIRIIGFDNVRQVQCISFIAHKPPGY 90
>gb|AFS41744.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 182
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 136 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKGY 182
>gb|AFS41724.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium raimondii]
Length = 182
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 136 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPEGY 182
>gb|AEX60841.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366462|gb|AFS41728.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366476|gb|AFS41735.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium barbadense]
gi|406366492|gb|AFS41743.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium tomentosum] gi|406366506|gb|AFS41750.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
gi|406366520|gb|AFS41757.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 182
Score = 93.6 bits (231), Expect = 2e-17
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 136 CTDSAQVLKELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPEGY 182
>gb|AFS41748.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium tomentosum]
Length = 179
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEE KK YPNAFIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 133 CTDSAQVLKELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AFS41733.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
Length = 179
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEE KK YPNAFIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 133 CTDSAQVLKELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AFS41756.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium darwinii]
Length = 182
Score = 92.0 bits (227), Expect = 7e-17
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVL+ELEE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 136 CTDSAQVLEELEECKKEYPNAFIRIIGFDNVRQVQCISFIAYKPEGY 182
>gb|AFS41729.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366478|gb|AFS41736.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366508|gb|AFS41751.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium mustelinum]
Length = 182
Score = 91.7 bits (226), Expect = 9e-17
Identities = 43/47 (91%), Positives = 43/47 (91%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELE KKEYPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 136 CTDSAQVLKELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKGY 182
>gb|AFS41753.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium mustelinum]
Length = 179
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVL+ELEE KK YPNAFIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 133 CTDSAQVLEELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AEX60842.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366450|gb|AFS41722.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium arboreum] gi|406366452|gb|AFS41723.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium arboreum]
gi|406366466|gb|AFS41730.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium hirsutum] gi|406366468|gb|AFS41731.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium hirsutum]
gi|406366480|gb|AFS41737.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366496|gb|AFS41745.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366510|gb|AFS41752.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium mustelinum] gi|406366524|gb|AFS41759.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium darwinii]
Length = 179
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVL+ELEE KK YPNAFIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 133 CTDSAQVLEELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKPPGF 179
>gb|AEX60839.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(chloroplast) [Gossypium hirsutum]
gi|406366482|gb|AFS41738.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium barbadense] gi|406366498|gb|AFS41746.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (chloroplast) [Gossypium tomentosum]
gi|406366522|gb|AFS41758.1| ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (chloroplast)
[Gossypium darwinii]
Length = 179
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVL+ELEE KK YPNAFIRIIGFDNVRQVQCISFIAYKPPG+
Sbjct: 133 CTDSAQVLEELEECKKAYPNAFIRIIGFDNVRQVQCISFIAYKPPGF 179
>ref|XP_003581511.1| PREDICTED: ribulose bisphosphate carboxylase small chain A,
chloroplastic-like [Brachypodium distachyon]
Length = 176
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPG 138
C D+ QVLKELEEAKKEYP+AFIRIIGFDNVRQVQCISFIAYKPPG
Sbjct: 124 CTDATQVLKELEEAKKEYPDAFIRIIGFDNVRQVQCISFIAYKPPG 169
>ref|XP_004303137.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 182
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C D++QVLKELEEAKK YPNAFIRIIGFDNVRQVQCISFIAYKP GY
Sbjct: 136 CTDASQVLKELEEAKKAYPNAFIRIIGFDNVRQVQCISFIAYKPAGY 182
>gb|AEA48975.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit [Rosa
roxburghii]
Length = 179
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKELEEAKK +P+ FIRIIGFDNVRQVQCISFIAYKPPGY
Sbjct: 133 CTDSAQVLKELEEAKKAHPDGFIRIIGFDNVRQVQCISFIAYKPPGY 179
>ref|NP_176880.1| ribulose bisphosphate carboxylase small chain 1A [Arabidopsis
thaliana] gi|27735223|sp|P10795.2|RBS1A_ARATH RecName:
Full=Ribulose bisphosphate carboxylase small chain 1A,
chloroplastic; Short=RuBisCO small subunit 1A; Flags:
Precursor gi|11762170|gb|AAG40363.1|AF325011_1 000C10C11
[Arabidopsis thaliana]
gi|15294200|gb|AAK95277.1|AF410291_1 F1O19.10/F1O19.10
[Arabidopsis thaliana] gi|4204274|gb|AAD10655.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|15451002|gb|AAK96772.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|15809842|gb|AAL06849.1|
At1g67090/F1O19.10 [Arabidopsis thaliana]
gi|16604426|gb|AAL24219.1| At1g67090/F1O19.10
[Arabidopsis thaliana] gi|16649141|gb|AAL24422.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|17065072|gb|AAL32690.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|17065270|gb|AAL32789.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|17473628|gb|AAL38277.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|20260064|gb|AAM13379.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|20260080|gb|AAM13387.1|
ribulose bisphosphate carboxylase, small subunit
[Arabidopsis thaliana] gi|20453287|gb|AAM19882.1|
At1g67090/F1O19.10 [Arabidopsis thaliana]
gi|23198308|gb|AAN15681.1| ribulose bisphosphate
carboxylase, small subunit [Arabidopsis thaliana]
gi|25083492|gb|AAN72087.1| ribulose bisphosphate
carboxylase, small subunit [Arabidopsis thaliana]
gi|110741032|dbj|BAE98610.1| ribulose bisphosphate
carboxylase like protein, small subunit [Arabidopsis
thaliana] gi|110741446|dbj|BAE98685.1| ribulose
bisphosphate carboxylase like protein, small subunit
[Arabidopsis thaliana] gi|110741475|dbj|BAE98695.1|
ribulose bisphosphate carboxylase like protein, small
subunit [Arabidopsis thaliana]
gi|110741865|dbj|BAE98874.1| ribulose bisphosphate
carboxylase like protein, small subunit [Arabidopsis
thaliana] gi|332196473|gb|AEE34594.1| ribulose
bisphosphate carboxylase small chain 1A [Arabidopsis
thaliana]
Length = 180
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKE+EE KKEYPNAFIRIIGFDN RQVQCISFIAYKPP +
Sbjct: 132 CTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSF 178
>ref|XP_006285820.1| hypothetical protein CARUB_v10007296mg [Capsella rubella]
gi|482554525|gb|EOA18718.1| hypothetical protein
CARUB_v10007296mg [Capsella rubella]
Length = 181
Score = 90.1 bits (222), Expect = 3e-16
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = +1
Query: 1 CNDSAQVLKELEEAKKEYPNAFIRIIGFDNVRQVQCISFIAYKPPGY 141
C DSAQVLKE+EE KKEYPNAFIRIIGFDN RQVQCISFIAYKPP +
Sbjct: 132 CTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSF 178