BLASTX nr result

ID: Rauwolfia21_contig00026973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00026973
         (335 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    64   3e-08
emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]    64   3e-08
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    60   3e-07
ref|XP_006352946.1| PREDICTED: RING-H2 finger protein ATL52-like...    60   4e-07
ref|XP_006587595.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    58   1e-06
ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    58   1e-06
gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobro...    57   2e-06
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    56   4e-06
ref|XP_004246183.1| PREDICTED: RING-H2 finger protein ATL52-like...    55   7e-06

>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/53 (54%), Positives = 40/53 (75%)
 Frame = +2

Query: 8   VAGSKRPVEEVSRSNNRSRILHCVTSPTAMKRSFSSGRFLFPKRARGSNIVLP 166
           V  SK  V E+S+ ++R+R+LHCV SP +MKRSFSSGR LF + ARG + ++P
Sbjct: 314 VGSSKVAVGEISKYSHRNRVLHCVMSPVSMKRSFSSGRLLFTRHARGRDGIIP 366


>emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
          Length = 1377

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/53 (54%), Positives = 40/53 (75%)
 Frame = +2

Query: 8    VAGSKRPVEEVSRSNNRSRILHCVTSPTAMKRSFSSGRFLFPKRARGSNIVLP 166
            V  SK  V E+S+ ++R+R+LHCV SP +MKRSFSSGR LF + ARG + ++P
Sbjct: 1316 VGSSKVAVGEISKYSHRNRVLHCVMSPVSMKRSFSSGRLLFTRHARGRDGIIP 1368


>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/62 (50%), Positives = 38/62 (61%)
 Frame = +2

Query: 5   DVAGSKRPVEEVSRSNNRSRILHCVTSPTAMKRSFSSGRFLFPKRARGSNIVLPL*KFLN 184
           DV  SK  V E SRS++R RILHCV SP +MKRSFSSGR    K  R    + P+  F  
Sbjct: 306 DVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPVPNFTT 365

Query: 185 RS 190
           ++
Sbjct: 366 QN 367


>ref|XP_006352946.1| PREDICTED: RING-H2 finger protein ATL52-like [Solanum tuberosum]
          Length = 344

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/46 (54%), Positives = 34/46 (73%)
 Frame = +2

Query: 32  EEVSRSNNRSRILHCVTSPTAMKRSFSSGRFLFPKRARGSNIVLPL 169
           +EV      +R+ +CV +P  MKRSFSSGRF+FPKR RG N+++PL
Sbjct: 299 QEVGEEEEVNRLPYCVPTPMGMKRSFSSGRFMFPKRGRGQNMIIPL 344


>ref|XP_006587595.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like isoform X2
           [Glycine max]
          Length = 357

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/51 (56%), Positives = 34/51 (66%)
 Frame = +2

Query: 17  SKRPVEEVSRSNNRSRILHCVTSPTAMKRSFSSGRFLFPKRARGSNIVLPL 169
           SK    E S+S+ R R+LHCV SP AMKRSFSSGRF   +  RG   VLP+
Sbjct: 307 SKNSRGESSKSSYRRRVLHCVLSPIAMKRSFSSGRFSLSRNGRGKQWVLPV 357


>ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like isoform X1
           [Glycine max]
          Length = 370

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/51 (56%), Positives = 34/51 (66%)
 Frame = +2

Query: 17  SKRPVEEVSRSNNRSRILHCVTSPTAMKRSFSSGRFLFPKRARGSNIVLPL 169
           SK    E S+S+ R R+LHCV SP AMKRSFSSGRF   +  RG   VLP+
Sbjct: 320 SKNSRGESSKSSYRRRVLHCVLSPIAMKRSFSSGRFSLSRNGRGKQWVLPV 370


>gb|EOY23974.1| RING/U-box superfamily protein, putative [Theobroma cacao]
          Length = 370

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/54 (48%), Positives = 37/54 (68%)
 Frame = +2

Query: 8   VAGSKRPVEEVSRSNNRSRILHCVTSPTAMKRSFSSGRFLFPKRARGSNIVLPL 169
           +AGS +   E S+ +N+ R+LHCV +P AMKRSFSSGRF   ++ R  +  +PL
Sbjct: 317 IAGSSKQSAEGSKLSNKMRVLHCVMNPVAMKRSFSSGRFFLTRQGRVRDPAIPL 370


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/51 (54%), Positives = 34/51 (66%)
 Frame = +2

Query: 17  SKRPVEEVSRSNNRSRILHCVTSPTAMKRSFSSGRFLFPKRARGSNIVLPL 169
           SK    E S+S+ R ++LHCV SP AMKRSFSSGRF   +  RG   VLP+
Sbjct: 314 SKNSRGESSKSSYRRKVLHCVLSPIAMKRSFSSGRFSLSRNGRGRQWVLPV 364


>ref|XP_004246183.1| PREDICTED: RING-H2 finger protein ATL52-like [Solanum lycopersicum]
          Length = 341

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/55 (47%), Positives = 36/55 (65%)
 Frame = +2

Query: 5   DVAGSKRPVEEVSRSNNRSRILHCVTSPTAMKRSFSSGRFLFPKRARGSNIVLPL 169
           +V  S++ V E     N   + +CV +P  +KRSFSSGRF+FPKR RG N ++PL
Sbjct: 289 EVGTSRQEVREEEEEENT--LPYCVPTPMGIKRSFSSGRFIFPKRGRGQNTIIPL 341