BLASTX nr result
ID: Rauwolfia21_contig00025992
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00025992
(965 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE05066.1| OSJNBa0094P09.5 [Oryza sativa Japonica Group] gi... 69 3e-09
gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Ja... 68 6e-09
gb|AAU44091.1| putative polyprotein [Oryza sativa Japonica Group] 67 8e-09
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc... 67 1e-08
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera] 67 1e-08
gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subc... 67 1e-08
gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subc... 67 1e-08
ref|XP_002489303.1| hypothetical protein SORBIDRAFT_0010s005460 ... 67 1e-08
gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group] 67 1e-08
gb|ABA97460.1| retrotransposon protein, putative, Ty1-copia subc... 66 2e-08
emb|CAN63175.1| hypothetical protein VITISV_027195 [Vitis vinifera] 66 2e-08
emb|CAH67291.1| OSIGBa0103O01.9 [Oryza sativa Indica Group] 66 2e-08
gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group] 66 2e-08
gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group] 66 2e-08
gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] 66 2e-08
gb|AAT44242.1| putative ubiquitin carrier protein [Oryza sativa ... 66 2e-08
ref|XP_004986594.1| PREDICTED: uncharacterized protein LOC101753... 65 3e-08
gb|ABA98225.1| retrotransposon protein, putative, Ty1-copia subc... 65 3e-08
gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subc... 65 3e-08
gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subc... 65 3e-08
>emb|CAE05066.1| OSJNBa0094P09.5 [Oryza sativa Japonica Group]
gi|32492383|emb|CAE05129.1| OSJNBa0079F16.21 [Oryza
sativa Japonica Group]
Length = 849
Score = 68.6 bits (166), Expect = 3e-09
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKL+P+G I KYK RLVAK + QKE Y+F YSPVAR + +L
Sbjct: 480 KPMGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEYFFDTYSPVARLTTIRVL 534
>gb|AAR01736.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
gi|108709997|gb|ABF97792.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1177
Score = 67.8 bits (164), Expect = 6e-09
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = -1
Query: 959 YKSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
YK CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR + +L
Sbjct: 757 YKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 812
>gb|AAU44091.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1117
Score = 67.4 bits (163), Expect = 8e-09
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
KS CKWIFKKKL+P+G I KYK RLVAK + QKE +F YSPVAR + +L
Sbjct: 647 KSVGCKWIFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 701
>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1151
Score = 67.0 bits (162), Expect = 1e-08
Identities = 32/55 (58%), Positives = 38/55 (69%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKL+PNG I KYK RLVAK + QKE +F YSPVAR + +L
Sbjct: 704 KPVGCKWVFKKKLRPNGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 758
>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
Length = 839
Score = 67.0 bits (162), Expect = 1e-08
Identities = 36/61 (59%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVAR-TSYYMLLYFPS 780
K CKWIFKKK+KP+G I KYK RLVAK FKQKE +F YSPV R TS +L+ +
Sbjct: 521 KHLGCKWIFKKKMKPDGTIDKYKARLVAKGFKQKESLDFFDTYSPVTRITSIRVLIAIVA 580
Query: 779 L 777
L
Sbjct: 581 L 581
>gb|ABA96250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 66.6 bits (161), Expect = 1e-08
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKL+P+G I KYK+RLVAK + QKE +F YSPVAR + +L
Sbjct: 943 KPVGCKWVFKKKLRPDGTIEKYKVRLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 997
>gb|ABA93966.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1212
Score = 66.6 bits (161), Expect = 1e-08
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVAR-TSYYMLLYFPS 780
K CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR T+ +LL P+
Sbjct: 797 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKECEDFFDTYSPVARLTTIRVLLSLPA 856
>ref|XP_002489303.1| hypothetical protein SORBIDRAFT_0010s005460 [Sorghum bicolor]
gi|241946951|gb|EES20096.1| hypothetical protein
SORBIDRAFT_0010s005460 [Sorghum bicolor]
Length = 699
Score = 66.6 bits (161), Expect = 1e-08
Identities = 32/55 (58%), Positives = 38/55 (69%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKL+P+G I KYK RLVAK + QKE YF YSPVAR + +L
Sbjct: 228 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDYFDTYSPVARLTTIRVL 282
>gb|AAV44166.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1342
Score = 66.6 bits (161), Expect = 1e-08
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKL+P+G I KYK+RLVAK + QKE +F YSPVAR + +L
Sbjct: 915 KPVGCKWVFKKKLRPDGTIEKYKVRLVAKGYTQKEGEDFFDTYSPVARLTTIRVL 969
>gb|ABA97460.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 786
Score = 66.2 bits (160), Expect = 2e-08
Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVAR-TSYYMLL 792
K CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR T+ ++LL
Sbjct: 216 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIHVLL 271
>emb|CAN63175.1| hypothetical protein VITISV_027195 [Vitis vinifera]
Length = 338
Score = 66.2 bits (160), Expect = 2e-08
Identities = 38/68 (55%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVAR-TSYYMLL---Y 789
K CKWIFKKK+KP+G I KYK RLVAK FKQKE +F YSPV R TS L+
Sbjct: 132 KPLGCKWIFKKKMKPDGTIDKYKARLVAKGFKQKEGLDFFDTYSPVTRITSIRXLIARTT 191
Query: 788 FPSLRIHK 765
+L+IH+
Sbjct: 192 LHNLKIHQ 199
>emb|CAH67291.1| OSIGBa0103O01.9 [Oryza sativa Indica Group]
Length = 857
Score = 66.2 bits (160), Expect = 2e-08
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLLY 789
K CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR + +L+
Sbjct: 481 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLF 536
>gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1229
Score = 66.2 bits (160), Expect = 2e-08
Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVAR-TSYYMLL 792
K CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR T+ ++LL
Sbjct: 760 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIHVLL 815
>gb|AAV59441.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1225
Score = 66.2 bits (160), Expect = 2e-08
Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVAR-TSYYMLL 792
K CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR T+ ++LL
Sbjct: 738 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIHVLL 793
>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
Length = 1264
Score = 66.2 bits (160), Expect = 2e-08
Identities = 32/55 (58%), Positives = 38/55 (69%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKLKP+G I KYK RLVAK + QKE +F YSPVAR + +L
Sbjct: 795 KPVGCKWVFKKKLKPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARMTTIRVL 849
>gb|AAT44242.1| putative ubiquitin carrier protein [Oryza sativa Japonica Group]
Length = 974
Score = 65.9 bits (159), Expect = 2e-08
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKLKP+G I KYK RL+AK + QKE +F YSPVAR + +L
Sbjct: 709 KPVGCKWVFKKKLKPDGTIEKYKARLIAKGYTQKEGEDFFDTYSPVARLTTIRVL 763
>ref|XP_004986594.1| PREDICTED: uncharacterized protein LOC101753122, partial [Setaria
italica]
Length = 602
Score = 65.5 bits (158), Expect = 3e-08
Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVAR-TSYYMLL 792
K CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR TS +LL
Sbjct: 403 KPVGCKWVFKKKLRPDGTIDKYKARLVAKGYTQKEGEDFFDTYSPVARLTSIRVLL 458
>gb|ABA98225.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1199
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR + +L
Sbjct: 729 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTMIRVL 783
>gb|ABA93790.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1370
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR + +L
Sbjct: 900 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTMIRVL 954
>gb|ABA94191.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1060
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -1
Query: 956 KSTPCKWIFKKKLKPNGIIYKYKIRLVAKVFKQKERSYYFGYYSPVARTSYYMLL 792
K CKW+FKKKL+P+G I KYK RLVAK + QKE +F YSPVAR + +L
Sbjct: 701 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTIIRVL 755