BLASTX nr result

ID: Rauwolfia21_contig00025942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00025942
         (258 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173443.1| hypothetical protein NitaMp105 [Nicotiana tabac...    62   8e-08
ref|XP_002535856.1| conserved hypothetical protein [Ricinus comm...    58   1e-06

>ref|YP_173443.1| hypothetical protein NitaMp105 [Nicotiana tabacum]
           gi|56806607|dbj|BAD83508.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 160

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/47 (70%), Positives = 35/47 (74%)
 Frame = -1

Query: 255 DLLSMAGGFFRIKQDWGGQGRRIGTRGDAYASSLSI*FPSFPVSGSG 115
           DL SMAG F   +  WGGQGR IG+RGDAYASSLSI FPSF V G G
Sbjct: 71  DLFSMAGAFVS-RVCWGGQGRWIGSRGDAYASSLSIGFPSFSVYGEG 116


>ref|XP_002535856.1| conserved hypothetical protein [Ricinus communis]
           gi|223521723|gb|EEF26527.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/32 (84%), Positives = 28/32 (87%)
 Frame = -1

Query: 210 WGGQGRRIGTRGDAYASSLSI*FPSFPVSGSG 115
           WGGQGRRIG+RGDAYASSLSI FPSF V G G
Sbjct: 15  WGGQGRRIGSRGDAYASSLSIEFPSFAVYGEG 46


Top