BLASTX nr result

ID: Rauwolfia21_contig00025832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00025832
         (512 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY12006.1| NOL1/NOP2/sun family protein / antitermination Nu...   122   6e-26
ref|XP_004251938.1| PREDICTED: ribosomal RNA small subunit methy...   120   1e-25
ref|XP_002522772.1| ribosomal RNA small subunit methyltransferas...   113   3e-23
ref|XP_004295189.1| PREDICTED: ribosomal RNA small subunit methy...   112   7e-23
ref|XP_006344895.1| PREDICTED: putative ribosomal RNA methyltran...   111   9e-23
ref|XP_006344894.1| PREDICTED: putative ribosomal RNA methyltran...   111   9e-23
ref|XP_006344891.1| PREDICTED: putative ribosomal RNA methyltran...   111   9e-23
gb|ESW14417.1| hypothetical protein PHAVU_008G279400g [Phaseolus...   110   2e-22
gb|EMJ06236.1| hypothetical protein PRUPE_ppa004181mg [Prunus pe...   110   3e-22
ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferas...   109   3e-22
ref|XP_004491518.1| PREDICTED: ribosomal RNA small subunit methy...   109   4e-22
ref|XP_003519634.2| PREDICTED: putative ribosomal RNA methyltran...   108   6e-22
ref|XP_006474882.1| PREDICTED: putative ribosomal RNA methyltran...   108   7e-22
ref|XP_006474881.1| PREDICTED: putative ribosomal RNA methyltran...   108   7e-22
ref|XP_006474880.1| PREDICTED: putative ribosomal RNA methyltran...   108   7e-22
ref|XP_006474879.1| PREDICTED: putative ribosomal RNA methyltran...   108   7e-22
ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methy...   107   1e-21
emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]   107   1e-21
ref|XP_006452604.1| hypothetical protein CICLE_v10010260mg [Citr...   107   2e-21
ref|XP_002300381.2| NOL1/NOP2/sun family protein [Populus tricho...   105   6e-21

>gb|EOY12006.1| NOL1/NOP2/sun family protein / antitermination NusB
           domain-containing protein [Theobroma cacao]
          Length = 526

 Score =  122 bits (305), Expect = 6e-26
 Identities = 62/84 (73%), Positives = 68/84 (80%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           K +K  KRT + N+S ST K GL   + K  KLN EVSPHRAVSAVRLMRIELGGAFADL
Sbjct: 21  KPLKLTKRTNKSNTSFSTAKKGLLSPSHKVQKLNLEVSPHRAVSAVRLMRIELGGAFADL 80

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNE+GKGSG NEMGYVERT+GFRT
Sbjct: 81  LNEKGKGSGDNEMGYVERTLGFRT 104


>ref|XP_004251938.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
           [Solanum lycopersicum]
          Length = 564

 Score =  120 bits (302), Expect = 1e-25
 Identities = 64/84 (76%), Positives = 69/84 (82%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           KQVKFAK+  Q NS+ S R+ G      K+ KLN EVSPHRAVSAVRLMRIELGGAFADL
Sbjct: 60  KQVKFAKKISQ-NSATSVRRAGSGSPLRKTHKLNLEVSPHRAVSAVRLMRIELGGAFADL 118

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNEQGKGSG NEMGYVERT+GFRT
Sbjct: 119 LNEQGKGSGDNEMGYVERTLGFRT 142


>ref|XP_002522772.1| ribosomal RNA small subunit methyltransferase B, putative [Ricinus
           communis] gi|223538010|gb|EEF39623.1| ribosomal RNA
           small subunit methyltransferase B, putative [Ricinus
           communis]
          Length = 527

 Score =  113 bits (282), Expect = 3e-23
 Identities = 56/82 (68%), Positives = 65/82 (79%)
 Frame = +1

Query: 235 VKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADLLN 414
           +KF+KR  +   S+S  + G      K+ KLN EVSPHRAVSAVRLMRIE+GGAFADLLN
Sbjct: 24  LKFSKRANKPKKSLSAPRKGPVSPLKKTQKLNLEVSPHRAVSAVRLMRIEMGGAFADLLN 83

Query: 415 EQGKGSGYNEMGYVERTIGFRT 480
           E+GKGSG NEMGYVERT+GFRT
Sbjct: 84  EKGKGSGENEMGYVERTLGFRT 105


>ref|XP_004295189.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
           [Fragaria vesca subsp. vesca]
          Length = 529

 Score =  112 bits (279), Expect = 7e-23
 Identities = 57/84 (67%), Positives = 69/84 (82%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           K +KF +RT+   +SIS  + G  + + K+ KLN E+SPHRAVSAVRLMRIE+GGAFADL
Sbjct: 27  KSLKFEQRTK---TSISAPRKGQFNPSRKTQKLNSEISPHRAVSAVRLMRIEMGGAFADL 83

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNE+GKGSG NEMGYVERT+GFRT
Sbjct: 84  LNERGKGSGENEMGYVERTLGFRT 107


>ref|XP_006344895.1| PREDICTED: putative ribosomal RNA methyltransferase Nop2-like
           isoform X5 [Solanum tuberosum]
          Length = 455

 Score =  111 bits (278), Expect = 9e-23
 Identities = 60/84 (71%), Positives = 64/84 (76%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           KQVKF K+  Q N + S R         K+ KLN EVSPHRAVSAVRLMRIE GGAFADL
Sbjct: 47  KQVKFPKKISQ-NPATSVRPADSGSPLRKTHKLNLEVSPHRAVSAVRLMRIEFGGAFADL 105

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNEQGKGSG NEMGYVERT+GFRT
Sbjct: 106 LNEQGKGSGDNEMGYVERTLGFRT 129


>ref|XP_006344894.1| PREDICTED: putative ribosomal RNA methyltransferase Nop2-like
           isoform X4 [Solanum tuberosum]
          Length = 475

 Score =  111 bits (278), Expect = 9e-23
 Identities = 60/84 (71%), Positives = 64/84 (76%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           KQVKF K+  Q N + S R         K+ KLN EVSPHRAVSAVRLMRIE GGAFADL
Sbjct: 47  KQVKFPKKISQ-NPATSVRPADSGSPLRKTHKLNLEVSPHRAVSAVRLMRIEFGGAFADL 105

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNEQGKGSG NEMGYVERT+GFRT
Sbjct: 106 LNEQGKGSGDNEMGYVERTLGFRT 129


>ref|XP_006344891.1| PREDICTED: putative ribosomal RNA methyltransferase Nop2-like
           isoform X1 [Solanum tuberosum]
           gi|565356060|ref|XP_006344892.1| PREDICTED: putative
           ribosomal RNA methyltransferase Nop2-like isoform X2
           [Solanum tuberosum]
          Length = 551

 Score =  111 bits (278), Expect = 9e-23
 Identities = 60/84 (71%), Positives = 64/84 (76%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           KQVKF K+  Q N + S R         K+ KLN EVSPHRAVSAVRLMRIE GGAFADL
Sbjct: 47  KQVKFPKKISQ-NPATSVRPADSGSPLRKTHKLNLEVSPHRAVSAVRLMRIEFGGAFADL 105

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNEQGKGSG NEMGYVERT+GFRT
Sbjct: 106 LNEQGKGSGDNEMGYVERTLGFRT 129


>gb|ESW14417.1| hypothetical protein PHAVU_008G279400g [Phaseolus vulgaris]
          Length = 532

 Score =  110 bits (275), Expect = 2e-22
 Identities = 57/84 (67%), Positives = 63/84 (75%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           K +K  +R R  N SI T   G      K+ KLN EVSPHRAVSAVRLMRIE GGAFADL
Sbjct: 28  KPLKLPRRIRGTNISIPTTAEGSGKRLLKTQKLNLEVSPHRAVSAVRLMRIEFGGAFADL 87

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNE+GKGSG NEMGYV+RT+GFRT
Sbjct: 88  LNEKGKGSGENEMGYVQRTLGFRT 111


>gb|EMJ06236.1| hypothetical protein PRUPE_ppa004181mg [Prunus persica]
          Length = 525

 Score =  110 bits (274), Expect = 3e-22
 Identities = 62/107 (57%), Positives = 75/107 (70%)
 Frame = +1

Query: 160 QALSISVLNSTEFFXXXXXXXXXKQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEV 339
           Q LS+ VL S E           K +K  KRT+   +SIS  + G  + + K+ K+N E+
Sbjct: 3   QVLSLGVLLSAE---TNRSSFSSKSLKLDKRTK---TSISAPRKGKLNPSHKTQKVNLEI 56

Query: 340 SPHRAVSAVRLMRIELGGAFADLLNEQGKGSGYNEMGYVERTIGFRT 480
           SPHRAVSAVRLMRIE+GGAFADLLNE+GKGSG NEMGYV RT+GFRT
Sbjct: 57  SPHRAVSAVRLMRIEMGGAFADLLNEKGKGSGANEMGYVGRTLGFRT 103


>ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferase [Medicago truncatula]
           gi|355519174|gb|AET00798.1| Ribosomal RNA small subunit
           methyltransferase [Medicago truncatula]
          Length = 654

 Score =  109 bits (273), Expect = 3e-22
 Identities = 57/85 (67%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSI-STRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFAD 405
           K  K + RT   N SI S+  NG ++ + K  KLN ++SPHRAVSAVRLMRIELGGAFAD
Sbjct: 24  KPFKLSHRTHSTNISILSSTNNGSANRSVKPQKLNSDISPHRAVSAVRLMRIELGGAFAD 83

Query: 406 LLNEQGKGSGYNEMGYVERTIGFRT 480
           LLNE+GKGSG NEMGYV+RT+GFRT
Sbjct: 84  LLNEKGKGSGENEMGYVQRTLGFRT 108


>ref|XP_004491518.1| PREDICTED: ribosomal RNA small subunit methyltransferase B-like
           [Cicer arietinum]
          Length = 531

 Score =  109 bits (272), Expect = 4e-22
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           + +K   RTR+ N SI T     ++ + K  KLN ++SPHRAVSAVRLMRIELGGAFADL
Sbjct: 27  ESLKLPHRTRKTNISIPTSTKVTTNRSVKPQKLNSDISPHRAVSAVRLMRIELGGAFADL 86

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNE+GKGSG NEMGYV+RT+GFRT
Sbjct: 87  LNEKGKGSGENEMGYVQRTLGFRT 110


>ref|XP_003519634.2| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Glycine max]
          Length = 534

 Score =  108 bits (271), Expect = 6e-22
 Identities = 57/84 (67%), Positives = 64/84 (76%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           K +K   RT   N SI +   G  +   K+ KLN EVSPHRAVSAVRLMRIELGGAFADL
Sbjct: 30  KPLKLPHRTCSTNISIPSTAKGGGNRLLKTQKLNSEVSPHRAVSAVRLMRIELGGAFADL 89

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNE+GKGSG NEMGYV+RT+GFRT
Sbjct: 90  LNEKGKGSGENEMGYVQRTLGFRT 113


>ref|XP_006474882.1| PREDICTED: putative ribosomal RNA methyltransferase nop2-like
           isoform X4 [Citrus sinensis]
          Length = 496

 Score =  108 bits (270), Expect = 7e-22
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +1

Query: 238 KFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADLLNE 417
           K A  TR+  +SIST+K      + ++  LN EVSPHRAVSAVRLMRI+LGGAFADLLN+
Sbjct: 24  KQAASTRKPRTSISTKKRAKVSPSRRTQNLNLEVSPHRAVSAVRLMRIQLGGAFADLLNK 83

Query: 418 QGKGSGYNEMGYVERTIGFRT 480
           +GKGSG NEMGYVERT+GFRT
Sbjct: 84  KGKGSGDNEMGYVERTLGFRT 104


>ref|XP_006474881.1| PREDICTED: putative ribosomal RNA methyltransferase nop2-like
           isoform X3 [Citrus sinensis]
          Length = 506

 Score =  108 bits (270), Expect = 7e-22
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +1

Query: 238 KFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADLLNE 417
           K A  TR+  +SIST+K      + ++  LN EVSPHRAVSAVRLMRI+LGGAFADLLN+
Sbjct: 24  KQAASTRKPRTSISTKKRAKVSPSRRTQNLNLEVSPHRAVSAVRLMRIQLGGAFADLLNK 83

Query: 418 QGKGSGYNEMGYVERTIGFRT 480
           +GKGSG NEMGYVERT+GFRT
Sbjct: 84  KGKGSGDNEMGYVERTLGFRT 104


>ref|XP_006474880.1| PREDICTED: putative ribosomal RNA methyltransferase nop2-like
           isoform X2 [Citrus sinensis]
          Length = 526

 Score =  108 bits (270), Expect = 7e-22
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +1

Query: 238 KFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADLLNE 417
           K A  TR+  +SIST+K      + ++  LN EVSPHRAVSAVRLMRI+LGGAFADLLN+
Sbjct: 24  KQAASTRKPRTSISTKKRAKVSPSRRTQNLNLEVSPHRAVSAVRLMRIQLGGAFADLLNK 83

Query: 418 QGKGSGYNEMGYVERTIGFRT 480
           +GKGSG NEMGYVERT+GFRT
Sbjct: 84  KGKGSGDNEMGYVERTLGFRT 104


>ref|XP_006474879.1| PREDICTED: putative ribosomal RNA methyltransferase nop2-like
           isoform X1 [Citrus sinensis]
          Length = 528

 Score =  108 bits (270), Expect = 7e-22
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +1

Query: 238 KFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADLLNE 417
           K A  TR+  +SIST+K      + ++  LN EVSPHRAVSAVRLMRI+LGGAFADLLN+
Sbjct: 24  KQAASTRKPRTSISTKKRAKVSPSRRTQNLNLEVSPHRAVSAVRLMRIQLGGAFADLLNK 83

Query: 418 QGKGSGYNEMGYVERTIGFRT 480
           +GKGSG NEMGYVERT+GFRT
Sbjct: 84  KGKGSGDNEMGYVERTLGFRT 104


>ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
           vinifera] gi|296089930|emb|CBI39749.3| unnamed protein
           product [Vitis vinifera]
          Length = 525

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/84 (66%), Positives = 68/84 (80%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           K +K AK   + N++I TR  G   +A+++  +N E+SPHRAVSAVRLMRIELGGAFADL
Sbjct: 22  KPLKVAKT--RPNTAIPTRSTGTRRNANRTYGVNLEISPHRAVSAVRLMRIELGGAFADL 79

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNE+GKGSG NEMGYVERT+GFRT
Sbjct: 80  LNERGKGSGDNEMGYVERTLGFRT 103


>emb|CAN67145.1| hypothetical protein VITISV_042360 [Vitis vinifera]
          Length = 324

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/84 (66%), Positives = 68/84 (80%)
 Frame = +1

Query: 229 KQVKFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADL 408
           K +K AK   + N++I TR  G   +A+++  +N E+SPHRAVSAVRLMRIELGGAFADL
Sbjct: 22  KPLKVAKT--RPNTAIPTRSTGTRRNANRTYGVNLEISPHRAVSAVRLMRIELGGAFADL 79

Query: 409 LNEQGKGSGYNEMGYVERTIGFRT 480
           LNE+GKGSG NEMGYVERT+GFRT
Sbjct: 80  LNERGKGSGDNEMGYVERTLGFRT 103


>ref|XP_006452604.1| hypothetical protein CICLE_v10010260mg [Citrus clementina]
           gi|557555830|gb|ESR65844.1| hypothetical protein
           CICLE_v10010260mg [Citrus clementina]
          Length = 524

 Score =  107 bits (266), Expect = 2e-21
 Identities = 54/81 (66%), Positives = 64/81 (79%)
 Frame = +1

Query: 238 KFAKRTRQHNSSISTRKNGLSDSASKSSKLNWEVSPHRAVSAVRLMRIELGGAFADLLNE 417
           K A  TR+  +SIST+K      + ++  LN EVSPHRAVSAVRLMRI+ GGAFADLLN+
Sbjct: 22  KQAASTRKPRTSISTKKRAKVSPSRRTQNLNLEVSPHRAVSAVRLMRIQFGGAFADLLNK 81

Query: 418 QGKGSGYNEMGYVERTIGFRT 480
           +GKGSG NEMGYVERT+GFRT
Sbjct: 82  KGKGSGDNEMGYVERTLGFRT 102


>ref|XP_002300381.2| NOL1/NOP2/sun family protein [Populus trichocarpa]
           gi|550349122|gb|EEE85186.2| NOL1/NOP2/sun family protein
           [Populus trichocarpa]
          Length = 527

 Score =  105 bits (262), Expect = 6e-21
 Identities = 54/81 (66%), Positives = 64/81 (79%), Gaps = 3/81 (3%)
 Frame = +1

Query: 247 KRTRQHNSSISTRKNGLSDSAS---KSSKLNWEVSPHRAVSAVRLMRIELGGAFADLLNE 417
           KR  +  +S+STR+       S   K+ KLN +VSPHRAVSAVRLMRIE+GGAFADLLN+
Sbjct: 25  KRIHKPKTSLSTRRKATQSPQSPLRKTQKLNLQVSPHRAVSAVRLMRIEMGGAFADLLND 84

Query: 418 QGKGSGYNEMGYVERTIGFRT 480
           +GKGSG NEMGYVERT+GFRT
Sbjct: 85  KGKGSGDNEMGYVERTLGFRT 105


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