BLASTX nr result

ID: Rauwolfia21_contig00025684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00025684
         (253 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853902.1| hypothetical protein AMTR_s00036p00173790 [A...    58   1e-06
ref|XP_006352368.1| PREDICTED: isoleucine--tRNA ligase, cytoplas...    56   4e-06
ref|XP_004250257.1| PREDICTED: isoleucine--tRNA ligase, cytoplas...    56   4e-06
ref|XP_002263182.1| PREDICTED: isoleucyl-tRNA synthetase, cytopl...    55   7e-06
emb|CAN60577.1| hypothetical protein VITISV_034773 [Vitis vinifera]    55   7e-06

>ref|XP_006853902.1| hypothetical protein AMTR_s00036p00173790 [Amborella trichopoda]
           gi|548857570|gb|ERN15369.1| hypothetical protein
           AMTR_s00036p00173790 [Amborella trichopoda]
          Length = 1167

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 31/52 (59%), Positives = 34/52 (65%), Gaps = 11/52 (21%)
 Frame = -3

Query: 125 AGIIKDTVTRYQSMTG-----------HGLPGKHEIDDTLGIKSRNEVIEMG 3
           AG IKD VTRYQSM G           HGLP +HEID  LGI SRN+V+EMG
Sbjct: 62  AGTIKDIVTRYQSMNGYHVTRRFGWDCHGLPVEHEIDKKLGITSRNDVLEMG 113


>ref|XP_006352368.1| PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like isoform X1
           [Solanum tuberosum]
          Length = 1182

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 11/52 (21%)
 Frame = -3

Query: 125 AGIIKDTVTRYQSMTGH-----------GLPGKHEIDDTLGIKSRNEVIEMG 3
           AG IKD VTRYQSMTGH           GLP +HEID+ L IK++ +VIEMG
Sbjct: 62  AGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDEKLQIKTKQQVIEMG 113


>ref|XP_004250257.1| PREDICTED: isoleucine--tRNA ligase, cytoplasmic-like [Solanum
           lycopersicum]
          Length = 1182

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 11/52 (21%)
 Frame = -3

Query: 125 AGIIKDTVTRYQSMTGH-----------GLPGKHEIDDTLGIKSRNEVIEMG 3
           AG IKD VTRYQSMTGH           GLP +HEID+ L IK++ +VIEMG
Sbjct: 62  AGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDEKLQIKTKQQVIEMG 113


>ref|XP_002263182.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic-like [Vitis
           vinifera]
          Length = 1183

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 11/52 (21%)
 Frame = -3

Query: 125 AGIIKDTVTRYQSMTGH-----------GLPGKHEIDDTLGIKSRNEVIEMG 3
           AG IKD VTRYQSMTGH           GLP +HEID  LGI++R +V++MG
Sbjct: 62  AGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDKKLGIQTREDVLKMG 113


>emb|CAN60577.1| hypothetical protein VITISV_034773 [Vitis vinifera]
          Length = 1140

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 11/52 (21%)
 Frame = -3

Query: 125 AGIIKDTVTRYQSMTGH-----------GLPGKHEIDDTLGIKSRNEVIEMG 3
           AG IKD VTRYQSMTGH           GLP +HEID  LGI++R +V++MG
Sbjct: 62  AGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDKKLGIQTREDVLKMG 113


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