BLASTX nr result
ID: Rauwolfia21_contig00025625
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00025625
(552 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera] 168 3e-46
emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera] 167 1e-45
emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera] 164 7e-45
emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera] 165 5e-44
emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera] 163 5e-44
emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera] 161 2e-43
dbj|BAF36296.1| hypothetical protein [Ipomoea trifida] 161 9e-43
gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida] 161 9e-43
gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa] 157 3e-41
gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopers... 157 3e-41
gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana] 158 5e-41
dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis tha... 157 1e-40
ref|XP_004309897.1| PREDICTED: uncharacterized protein LOC101292... 152 1e-40
ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304... 152 1e-40
gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea] 156 6e-40
gb|AAL68851.1|AF466199_10 putative copia polyprotein [Sorghum bi... 145 2e-38
ref|XP_004237326.1| PREDICTED: uncharacterized protein LOC101252... 150 3e-38
gb|ABA92033.1| retrotransposon protein, putative, Ty1-copia subc... 143 1e-37
emb|CCW72596.1| ORW1943Ba0047B01.15 [Oryza rufipogon] 145 2e-37
gb|ABF96131.1| retrotransposon protein, putative, Ty1-copia subc... 141 3e-37
>emb|CAN60947.1| hypothetical protein VITISV_015758 [Vitis vinifera]
Length = 1306
Score = 168 bits (426), Expect(2) = 3e-46
Identities = 77/97 (79%), Positives = 90/97 (92%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWK+ IQ+ELN+L+KREVFGPVV+ P+DVKPVGYKWVFVRKRNENNE++RYKARLVA
Sbjct: 846 DWPKWKEXIQAELNSLTKREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVA 905
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPGIDY ETYSPV+DAIT R+L+SLAV+ +D
Sbjct: 906 QGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLD 942
Score = 42.7 bits (99), Expect(2) = 3e-46
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
+RLM+V+TAYLY ++ +D +MKIP+GF +P
Sbjct: 943 MRLMDVITAYLYGSMDNDIYMKIPEGFKLP 972
>emb|CAN66208.1| hypothetical protein VITISV_035070 [Vitis vinifera]
Length = 1496
Score = 167 bits (424), Expect(2) = 1e-45
Identities = 77/97 (79%), Positives = 90/97 (92%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWK+AIQ+ELN+L+KREVFGPVV+ P+DVKPVGYKWVFVRKRNENNE++RYKARLVA
Sbjct: 962 DWPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVA 1021
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QG SQRPGIDY ETYSPV+DAIT R+L+SLAV+ +D
Sbjct: 1022 QGXSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLD 1058
Score = 41.2 bits (95), Expect(2) = 1e-45
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
+RLM+V+T YLY ++ +D +MKIP+GF +P
Sbjct: 1059 MRLMDVITTYLYGSMDNDIYMKIPEGFELP 1088
>emb|CAN79264.1| hypothetical protein VITISV_034881 [Vitis vinifera]
Length = 1360
Score = 164 bits (414), Expect(2) = 7e-45
Identities = 76/97 (78%), Positives = 87/97 (89%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWK AI ELN+L+KREVFGPVV+ P+DVKPVGYKWVFV KRNENNE++RYKARLVA
Sbjct: 826 DWPKWKXAIXXELNSLTKREVFGPVVQTPEDVKPVGYKWVFVXKRNENNEIIRYKARLVA 885
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPGIDY ETYSPV+DAIT R+L+SLAV+ +D
Sbjct: 886 QGFSQRPGIDYEETYSPVMDAITFRFLISLAVSEGLD 922
Score = 42.7 bits (99), Expect(2) = 7e-45
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
+RLM+V+TAYLY ++ +D +MKIP+GF +P
Sbjct: 923 MRLMDVITAYLYGSMDNDIYMKIPEGFKLP 952
>emb|CAN80162.1| hypothetical protein VITISV_038102 [Vitis vinifera]
Length = 701
Score = 165 bits (418), Expect(2) = 5e-44
Identities = 75/97 (77%), Positives = 89/97 (91%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWK+AIQ+ELN+L+KREVFGP+V+ P+DVKPVGYKWVFVRK NENNE++RYKARLVA
Sbjct: 178 DWPKWKEAIQAELNSLTKREVFGPIVQTPEDVKPVGYKWVFVRKPNENNEIIRYKARLVA 237
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPGIDY ETYSP++DAIT R+L+SLAV +D
Sbjct: 238 QGFSQRPGIDYEETYSPIMDAITFRFLISLAVLEGLD 274
Score = 38.5 bits (88), Expect(2) = 5e-44
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -1
Query: 255 LMNVVTAYLYRNLASDSHMKIPKGFTMP 172
LM+V+T YLY ++ +D +MKIP+GF +P
Sbjct: 277 LMDVITTYLYGSMDNDIYMKIPEGFKLP 304
>emb|CAN69821.1| hypothetical protein VITISV_030674 [Vitis vinifera]
Length = 570
Score = 163 bits (413), Expect(2) = 5e-44
Identities = 71/97 (73%), Positives = 89/97 (91%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWK+ IQ+ELN+L+KRE+FGP+V+ P+DVKP+GYKWVFVRK +ENNE++RYKARLVA
Sbjct: 151 DWPKWKEVIQAELNSLTKREIFGPIVKTPEDVKPIGYKWVFVRKCDENNEIIRYKARLVA 210
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPG+DY ETYSPV+DAIT R+L+SLAV+ +D
Sbjct: 211 QGFSQRPGVDYEETYSPVIDAITFRFLISLAVSEGLD 247
Score = 40.4 bits (93), Expect(2) = 5e-44
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTM 175
+RLMNV+T YLY ++ +D +MKIP+GF +
Sbjct: 248 MRLMNVITTYLYGSIDNDIYMKIPEGFKL 276
>emb|CAN68598.1| hypothetical protein VITISV_003488 [Vitis vinifera]
Length = 1146
Score = 161 bits (407), Expect(2) = 2e-43
Identities = 75/97 (77%), Positives = 88/97 (90%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
D KWK+AIQ+ELN+L+KREVFGPVV+ P+DVKPVGYKWVFVRKRNENNE++RYKARLVA
Sbjct: 647 DXPKWKEAIQAELNSLTKREVFGPVVQTPEDVKPVGYKWVFVRKRNENNEIIRYKARLVA 706
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFS RPGIDY TYSPV+DAIT R+L+SLAV+ +D
Sbjct: 707 QGFSXRPGIDYEXTYSPVMDAITFRFLISLAVSEGLD 743
Score = 40.8 bits (94), Expect(2) = 2e-43
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
+R M+V+TAYLY ++ +D +MKIP+GF +P
Sbjct: 744 MRXMDVITAYLYGSMDNDIYMKIPEGFKLP 773
>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
Length = 1291
Score = 161 bits (407), Expect(2) = 9e-43
Identities = 74/97 (76%), Positives = 87/97 (89%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DWLKWK+AI++ELN+L+KR+VFGP V PKDV PVG KWVFVRKRNENNEVVRYKARLVA
Sbjct: 654 DWLKWKEAIEAELNSLNKRKVFGPTVLTPKDVIPVGSKWVFVRKRNENNEVVRYKARLVA 713
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGF+QRPGID+ +TYSPV+D I+ RYL+SLAVN +D
Sbjct: 714 QGFTQRPGIDFEQTYSPVIDGISFRYLISLAVNMKLD 750
Score = 38.5 bits (88), Expect(2) = 9e-43
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
++LM+VVTAYLY +L +D +MKIP+G P
Sbjct: 751 MQLMDVVTAYLYGSLDADIYMKIPEGIQNP 780
>gb|AAS79613.1| putative copia-like polyprotein [Ipomoea trifida]
Length = 1190
Score = 161 bits (407), Expect(2) = 9e-43
Identities = 74/97 (76%), Positives = 87/97 (89%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DWLKWK+AI++ELN+L+KR+VFGP V PKDV PVG KWVFVRKRNENNEVVRYKARLVA
Sbjct: 654 DWLKWKEAIEAELNSLNKRKVFGPTVLTPKDVIPVGSKWVFVRKRNENNEVVRYKARLVA 713
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGF+QRPGID+ +TYSPV+D I+ RYL+SLAVN +D
Sbjct: 714 QGFTQRPGIDFEQTYSPVIDGISFRYLISLAVNMKLD 750
Score = 38.5 bits (88), Expect(2) = 9e-43
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
++LM+VVTAYLY +L +D +MKIP+G P
Sbjct: 751 MQLMDVVTAYLYGSLDADIYMKIPEGIQNP 780
>gb|AFP55536.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1508
Score = 157 bits (398), Expect(2) = 3e-41
Identities = 74/97 (76%), Positives = 84/97 (86%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWKDAIQ EL++L+KR+VFGPV + P VKPVG+KWVFVRKRNE NEVVRYK+RLVA
Sbjct: 954 DWPKWKDAIQVELDSLTKRQVFGPVTQTPPSVKPVGHKWVFVRKRNEKNEVVRYKSRLVA 1013
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPGIDY ETYSPV+D IT RYLVSL V+ +D
Sbjct: 1014 QGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLD 1050
Score = 37.0 bits (84), Expect(2) = 3e-41
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
++LM+VVT YLY +L S+ +MK+P G +P
Sbjct: 1051 MQLMDVVTTYLYGDLDSEIYMKVPDGLQLP 1080
>gb|AAK84483.1| putative copia-like polyprotein [Solanum lycopersicum]
Length = 779
Score = 157 bits (397), Expect(2) = 3e-41
Identities = 72/92 (78%), Positives = 82/92 (89%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWKDAIQ+EL +L KRE FGP++R P+ +KPVGYKW+FVRKRNE EV+RYKARLVA
Sbjct: 379 DWPKWKDAIQAELASLEKRESFGPIIRTPEGIKPVGYKWIFVRKRNEKGEVMRYKARLVA 438
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAV 276
QGFSQRPGIDY ETYSPVVDAIT RYL++LAV
Sbjct: 439 QGFSQRPGIDYMETYSPVVDAITFRYLINLAV 470
Score = 37.4 bits (85), Expect(2) = 3e-41
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
+RLM+VVTAYLY +L + MKIP+ F +P
Sbjct: 476 MRLMDVVTAYLYGSLDHNIFMKIPEAFKVP 505
>gb|AAF67380.1| Hypothetical protein T15F17.l [Arabidopsis thaliana]
Length = 1141
Score = 158 bits (399), Expect(2) = 5e-41
Identities = 70/97 (72%), Positives = 84/97 (86%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DWLKWK+AI EL +L KR+VFGP++R P ++KPVG+KWVFVRKRNE NE+VR+KARLVA
Sbjct: 618 DWLKWKEAIDVELGSLKKRDVFGPILRTPSNIKPVGHKWVFVRKRNEKNEIVRHKARLVA 677
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPG+DY ETYSPVVDA T RYL+SLA+ +D
Sbjct: 678 QGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLD 714
Score = 35.8 bits (81), Expect(2) = 5e-41
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMPFPELLSQGTGKSSSR 127
LRLM+VVTAYLY L ++ +M++P+G + +G K+ SR
Sbjct: 715 LRLMDVVTAYLYGPLDNEIYMRLPEGIEL-------KGKDKNGSR 752
>dbj|BAA97087.1| copia-type pol polyprotein-like [Arabidopsis thaliana]
Length = 1123
Score = 157 bits (396), Expect(2) = 1e-40
Identities = 69/97 (71%), Positives = 84/97 (86%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DWLKWK+AI EL +L +R+VFGP++R P ++KPVG+KWVFVRKRNE NE+VR+KARLVA
Sbjct: 618 DWLKWKEAIDVELGSLKRRDVFGPILRTPSNIKPVGHKWVFVRKRNEKNEIVRHKARLVA 677
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPG+DY ETYSPVVDA T RYL+SLA+ +D
Sbjct: 678 QGFSQRPGVDYEETYSPVVDATTFRYLISLAIRENLD 714
Score = 35.8 bits (81), Expect(2) = 1e-40
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMPFPELLSQGTGKSSSR 127
LRLM+VVTAYLY L ++ +M++P+G + +G K+ SR
Sbjct: 715 LRLMDVVTAYLYGPLDNEIYMRLPEGIEL-------KGKDKNGSR 752
>ref|XP_004309897.1| PREDICTED: uncharacterized protein LOC101292366 [Fragaria vesca
subsp. vesca]
Length = 611
Score = 152 bits (383), Expect(2) = 1e-40
Identities = 72/97 (74%), Positives = 83/97 (85%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWK AIQ+EL++L+KR+VFGPVV P VKPVG+KWVFVRK NE NEV+RYKARLVA
Sbjct: 334 DWPKWKVAIQAELDSLTKRQVFGPVVLTPPSVKPVGHKWVFVRKHNEKNEVLRYKARLVA 393
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPGI+Y ETYSPV+D IT RYLVSL V+ +D
Sbjct: 394 QGFSQRPGINYEETYSPVMDVITFRYLVSLVVSEKLD 430
Score = 40.8 bits (94), Expect(2) = 1e-40
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
++LM+VVTAYLY +L S+ +MK+P G T+P
Sbjct: 431 MQLMDVVTAYLYGDLDSEIYMKVPDGITLP 460
>ref|XP_004309292.1| PREDICTED: uncharacterized protein LOC101304635, partial [Fragaria
vesca subsp. vesca]
Length = 521
Score = 152 bits (383), Expect(2) = 1e-40
Identities = 72/97 (74%), Positives = 83/97 (85%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWK AIQ+EL++L+KR+VFGPV+ P VKPVG+KWVFVRKRNE NEV+ YKARLVA
Sbjct: 322 DWPKWKVAIQAELDSLTKRQVFGPVMLTPPSVKPVGHKWVFVRKRNEKNEVLLYKARLVA 381
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPGIDY ETYSPV+D IT RYLVSL V+ +D
Sbjct: 382 QGFSQRPGIDYEETYSPVMDVITFRYLVSLVVSEKLD 418
Score = 40.8 bits (94), Expect(2) = 1e-40
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
++LM+VVTAYLY +L S+ +MK+P G T+P
Sbjct: 419 MQLMDVVTAYLYGDLDSEIYMKVPDGITLP 448
>gb|AEL30347.1| copia-like polyprotein [Arachis hypogaea]
Length = 692
Score = 156 bits (395), Expect(2) = 6e-40
Identities = 72/91 (79%), Positives = 85/91 (93%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWK+ +++EL++L+KREVFGPVVR P+DVKPVGY+WVFVRKRN+ NEVVRYKARL+A
Sbjct: 233 DWPKWKEVMKAELDSLAKREVFGPVVRTPEDVKPVGYQWVFVRKRNKKNEVVRYKARLMA 292
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLA 279
QGFSQRPGIDY ETYSPV+DAITL YLVSL+
Sbjct: 293 QGFSQRPGIDYEETYSPVMDAITLSYLVSLS 323
Score = 33.5 bits (75), Expect(2) = 6e-40
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMPFP 166
+ LM+VVTAYLY +L D +MK+P+ + P
Sbjct: 330 MHLMDVVTAYLYGSLDRDIYMKVPEELKISKP 361
>gb|AAL68851.1|AF466199_10 putative copia polyprotein [Sorghum bicolor]
Length = 1082
Score = 145 bits (367), Expect(2) = 2e-38
Identities = 67/92 (72%), Positives = 81/92 (88%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW +WKDAIQ+E+++L+KR+VF V+ P V PVG+KWVFVRKRNENNEVVR+KARLVA
Sbjct: 601 DWNQWKDAIQAEISSLTKRQVFSQVIPTPPQVFPVGFKWVFVRKRNENNEVVRHKARLVA 660
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAV 276
QGF+QRPGID+NETYSPV+ IT RYL+SLAV
Sbjct: 661 QGFTQRPGIDFNETYSPVMGGITFRYLISLAV 692
Score = 39.7 bits (91), Expect(2) = 2e-38
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
++LM+VVTAYLY +L SD +MK+P G +P
Sbjct: 698 MQLMDVVTAYLYGSLDSDIYMKVPDGIPIP 727
>ref|XP_004237326.1| PREDICTED: uncharacterized protein LOC101252478 [Solanum
lycopersicum]
Length = 753
Score = 150 bits (378), Expect(2) = 3e-38
Identities = 69/97 (71%), Positives = 82/97 (84%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
D KW++ IQSELN+L+KREV GPVV+ P DVKP+GYKWVFVRKRNE NE+VRYKA LV
Sbjct: 406 DLPKWEEVIQSELNSLAKREVLGPVVQTPSDVKPIGYKWVFVRKRNEKNEIVRYKACLVE 465
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAVNATVD 261
QGFSQRPG+DY ETY PV+DAIT RYL+ LAV+ ++
Sbjct: 466 QGFSQRPGVDYEETYLPVMDAITFRYLIGLAVHENLE 502
Score = 34.7 bits (78), Expect(2) = 3e-38
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMPFPELLSQGTGKSSSR*LQKT 112
+ LM+V+T+YLY +L ++ +M +PKG + PE S + K S LQK+
Sbjct: 503 IHLMDVLTSYLYGSLDNEIYMTVPKGHKI--PEACSSISRKIYSIRLQKS 550
>gb|ABA92033.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1263
Score = 143 bits (360), Expect(2) = 1e-37
Identities = 65/92 (70%), Positives = 78/92 (84%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWKD+I +EL +L KR+VF V+ P+ + PVGYKWVFVRKRNENNEVVRYKAR VA
Sbjct: 760 DWNKWKDSIDAELASLYKRDVFSAVMPTPRGIFPVGYKWVFVRKRNENNEVVRYKARFVA 819
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAV 276
QGF+Q+PG+D+NETYSPV+ IT RYL+SLAV
Sbjct: 820 QGFTQKPGVDFNETYSPVMSGITFRYLISLAV 851
Score = 39.7 bits (91), Expect(2) = 1e-37
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
++LM+VVTAYLY +L SD +MK+P G +P
Sbjct: 857 MQLMDVVTAYLYGSLDSDIYMKVPDGIDIP 886
>emb|CCW72596.1| ORW1943Ba0047B01.15 [Oryza rufipogon]
Length = 1307
Score = 145 bits (365), Expect(2) = 2e-37
Identities = 67/92 (72%), Positives = 79/92 (85%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWKDAI +EL +L KR+VF V+ P+ + PVGYKWVF+RKRNENNEVVRYKARLVA
Sbjct: 816 DWNKWKDAINTELASLYKRDVFSAVMPTPRGIFPVGYKWVFLRKRNENNEVVRYKARLVA 875
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAV 276
QGF+Q+PGID+NETYSPV+ IT RYL+SLAV
Sbjct: 876 QGFTQKPGIDFNETYSPVMSGITFRYLISLAV 907
Score = 37.0 bits (84), Expect(2) = 2e-37
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKG 184
++LM+VVTAYLY +L SD +MK+P G
Sbjct: 913 MQLMDVVTAYLYGSLDSDIYMKVPDG 938
>gb|ABF96131.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1275
Score = 141 bits (356), Expect(2) = 3e-37
Identities = 65/92 (70%), Positives = 78/92 (84%)
Frame = -2
Query: 551 DWLKWKDAIQSELNALSKREVFGPVVRIPKDVKPVGYKWVFVRKRNENNEVVRYKARLVA 372
DW KWKDAI +EL +L KR+VF V+ + + PVGYKWVFVRKRNENNEVVRYKARL+A
Sbjct: 927 DWNKWKDAIDAELASLYKRDVFSGVMPTHRGIFPVGYKWVFVRKRNENNEVVRYKARLIA 986
Query: 371 QGFSQRPGIDYNETYSPVVDAITLRYLVSLAV 276
QGF+Q+PG+D+NETYSPV+ IT RYL+SLAV
Sbjct: 987 QGFTQKPGVDFNETYSPVMSGITFRYLISLAV 1018
Score = 39.7 bits (91), Expect(2) = 3e-37
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = -1
Query: 261 LRLMNVVTAYLYRNLASDSHMKIPKGFTMP 172
++LM+VVTAYLY +L SD +MK+P G +P
Sbjct: 1024 MQLMDVVTAYLYGSLDSDIYMKVPDGIDIP 1053