BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00025585
         (2410 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   703   0.0  
ref|XP_004237977.1| PREDICTED: pentatricopeptide repeat-containi...   692   0.0  
ref|XP_006338085.1| PREDICTED: pentatricopeptide repeat-containi...   688   0.0  
gb|EXC16677.1| hypothetical protein L484_007723 [Morus notabilis]     665   0.0  
ref|XP_006472504.1| PREDICTED: pentatricopeptide repeat-containi...   664   0.0  
ref|XP_006433856.1| hypothetical protein CICLE_v10000867mg [Citr...   664   0.0  
gb|EOY33044.1| Pentatricopeptide repeat superfamily protein isof...   658   0.0  
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   652   0.0  
ref|XP_004301354.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   644   0.0  
emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]   635   e-179
ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containi...   631   e-178
ref|XP_002301082.1| hypothetical protein POPTR_0002s10380g [Popu...   630   e-178
ref|XP_004501623.1| PREDICTED: pentatricopeptide repeat-containi...   628   e-177
ref|XP_003602939.1| Pentatricopeptide repeat-containing protein ...   626   e-176
ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containi...   620   e-174
gb|ESW09636.1| hypothetical protein PHAVU_009G143500g, partial [...   607   e-170
ref|XP_006287559.1| hypothetical protein CARUB_v10000770mg [Caps...   528   e-147
ref|XP_006403586.1| hypothetical protein EUTSA_v10010303mg [Eutr...   527   e-147
ref|XP_002873896.1| pentatricopeptide repeat-containing protein ...   527   e-147
ref|NP_974803.1| pentatricopeptide repeat-containing protein [Ar...   523   e-145

>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein At5g18475-like
            [Vitis vinifera]
          Length = 513

 Score =  703 bits (1814), Expect = 0.0
 Identities = 342/487 (70%), Positives = 415/487 (85%), Gaps = 3/487 (0%)
 Frame = -1

Query: 2161 PLQYFKPQNP--DSRARTSDTISGVPRKR-RYISHEYAINLINRERHPEHALEFFNKVSD 1991
            PLQY    +P  D  A  + T    PRK+ ++ISHE AINLI RE  P+ ALE FN+V++
Sbjct: 26   PLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAE 85

Query: 1990 QKSFNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHH 1811
            Q+ F+HNN+TYA IL+KLA SKKF  ID++LHQMTYETCKFHEGIF++LMKHFSK  LH 
Sbjct: 86   QRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHE 145

Query: 1810 KVLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNI 1631
            +V++MF+AI+P+VR KPSLKAISTCLNLLVE+NQ+DL R FLLN++K+L+L+PNTCIFNI
Sbjct: 146  RVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNI 205

Query: 1630 LVKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSK 1451
            LVK+HCK GD+++A  VV EMK S  SYP+LITYSTL++G C  GRL+EAIE+FEEMVSK
Sbjct: 206  LVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSK 265

Query: 1450 DQILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLED 1271
            DQILPDALTYN LI+GFC   KVDRA KIMEFMKKNGC+PNVFNYSALMNG CKEGRLE+
Sbjct: 266  DQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEE 325

Query: 1270 AKEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILG 1091
            AKE+F+EMK+ G++PD VGYTTLI++ CR+ RVDEA+ELLK+M+E  CRAD VTFNVILG
Sbjct: 326  AKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILG 385

Query: 1090 GLCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLP 911
            GLCR  RF+EA  MLE+LP++GV LNKASYRIVLNSLC+EGEL KAT+L+GLML R VLP
Sbjct: 386  GLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLP 445

Query: 910  HFATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLL 731
            HFATSNELLV LCEAGK   A + L GL+ELGFKPEP++W+LLV++ CRERKLLP+F+LL
Sbjct: 446  HFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELL 505

Query: 730  DELILQD 710
            D+L++Q+
Sbjct: 506  DDLVIQE 512


>ref|XP_004237977.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475-like
            [Solanum lycopersicum]
          Length = 511

 Score =  692 bits (1786), Expect = 0.0
 Identities = 335/488 (68%), Positives = 405/488 (82%), Gaps = 5/488 (1%)
 Frame = -1

Query: 2161 PLQY-----FKPQNPDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKV 1997
            PL Y      +P  P  R  TS+    VPRKR+YISHE A+NLI +E+    ALE FNKV
Sbjct: 27   PLDYQGRNSLRPGAPIERDGTSEQ---VPRKRKYISHESAVNLIKQEKDARRALEIFNKV 83

Query: 1996 SDQKSFNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRL 1817
            SDQK FNHNNSTYA +L++LA+ KKF  +++I+HQM YETCKFHEG+F +LMKH+S+S L
Sbjct: 84   SDQKGFNHNNSTYAVLLHRLAVCKKFETVEAIIHQMKYETCKFHEGVFTNLMKHYSRSSL 143

Query: 1816 HHKVLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIF 1637
            H KVL+MF+AI P+VR KPSL AISTCLNLLVEA QI+LA+ FLLN QK+L+LKPNTCIF
Sbjct: 144  HEKVLEMFDAILPIVREKPSLNAISTCLNLLVEAKQIELAKEFLLNVQKHLYLKPNTCIF 203

Query: 1636 NILVKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMV 1457
            NILVKYHCKKGD++AA  VV EM+ S  S+P+LITYSTL+DG CRCGRL++A+++FE+M+
Sbjct: 204  NILVKYHCKKGDVDAAFVVVEEMRKSRVSHPNLITYSTLMDGLCRCGRLQDALDLFEKML 263

Query: 1456 SKDQILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRL 1277
            +KDQI PDALTYN+LI+ FCR GKVDRA+ I+ FM+KNGC PN+ NY+ALMNG CKEGR+
Sbjct: 264  AKDQIPPDALTYNILINAFCRAGKVDRARNIIGFMRKNGCQPNIVNYTALMNGFCKEGRV 323

Query: 1276 EDAKEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVI 1097
            EDAKE+F+EMK  G++PD VGYTTLI+  CR+ +VDE IELL EMK+ GC+AD VT  +I
Sbjct: 324  EDAKEVFHEMKGVGLKPDVVGYTTLINSFCRAGKVDEGIELLDEMKDKGCKADDVTIKII 383

Query: 1096 LGGLCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRV 917
            LGGLCR  R  EA NMLE+LP+DGV L+K SYRIVLN LCKEGEL KA +LLGLMLARR 
Sbjct: 384  LGGLCRASRSSEAFNMLERLPYDGVHLSKESYRIVLNFLCKEGELVKAMDLLGLMLARRF 443

Query: 916  LPHFATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQ 737
            +PHFATSNEL+V LCEAGKA  AA+ LFGL+E+GFKPEP TWS+L+DV CRERKLLP+FQ
Sbjct: 444  VPHFATSNELIVQLCEAGKAADAALALFGLLEMGFKPEPQTWSMLIDVICRERKLLPAFQ 503

Query: 736  LLDELILQ 713
            LLDEL+LQ
Sbjct: 504  LLDELVLQ 511


>ref|XP_006338085.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475-like
            [Solanum tuberosum]
          Length = 511

 Score =  688 bits (1776), Expect = 0.0
 Identities = 327/473 (69%), Positives = 398/473 (84%)
 Frame = -1

Query: 2134 PDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQKSFNHNNSTYA 1955
            PD+  +   T   +PRKR+YISHE A+NLI +ER    ALE FNKVSDQK FNHNNSTYA
Sbjct: 38   PDAPIKRDGTSEQLPRKRKYISHESAVNLIKQERDARRALEIFNKVSDQKGFNHNNSTYA 97

Query: 1954 AILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVLDMFNAIQPL 1775
             +L++LA+ KKF  +D+I+HQM YETCKFHEG+F +LMKH+SKS LH KVL+MFNAI P+
Sbjct: 98   VLLHRLAVCKKFETVDAIIHQMKYETCKFHEGVFTNLMKHYSKSSLHEKVLEMFNAILPI 157

Query: 1774 VRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVKYHCKKGDLE 1595
            VR KPSL AISTCLNLL+EA QI+LA+ FLLN QK+L LKPNTCIFNILVKYHC+KGD+E
Sbjct: 158  VREKPSLNAISTCLNLLIEAKQIELAKEFLLNVQKHLDLKPNTCIFNILVKYHCRKGDVE 217

Query: 1594 AAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQILPDALTYNL 1415
            AA  VV EM+ S  S+P+LITYSTL+DG CRCGRL++A+++FE+M++KDQI PDALTYN+
Sbjct: 218  AAFVVVEEMRKSRVSHPNLITYSTLMDGLCRCGRLQDALDLFEKMLAKDQIPPDALTYNI 277

Query: 1414 LIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKEIFNEMKAGG 1235
            LI+ FCR GKVDRA+ I+ FM+KNGC PN+ NY+ALMNG CKEGR+ DAKE+F+EMK  G
Sbjct: 278  LINAFCRAGKVDRARNIIGFMRKNGCQPNIVNYTALMNGFCKEGRVGDAKEVFHEMKGVG 337

Query: 1234 VQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGGLCRRCRFDEAL 1055
            ++PD VGYTTLI+  CR+ +VD+ IELL+EMK+ GC+AD VT  +ILGGLCR  R  EA 
Sbjct: 338  LKPDVVGYTTLINSFCRAGKVDKGIELLEEMKDKGCKADDVTIKIILGGLCRASRSSEAF 397

Query: 1054 NMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFATSNELLVSL 875
            +MLE+LP+DGV L+K SYRIVLN LCKEGEL+KA +LLGLMLARR +PHFATSNEL+V L
Sbjct: 398  DMLERLPYDGVHLSKESYRIVLNFLCKEGELEKAMDLLGLMLARRFVPHFATSNELIVQL 457

Query: 874  CEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDELIL 716
            CEAGKA  AA+ LFGL+E+ FKPEP TWS+L+DV CRERKLLP+FQLLDEL+L
Sbjct: 458  CEAGKAADAALALFGLLEMSFKPEPRTWSMLIDVICRERKLLPAFQLLDELVL 510


>gb|EXC16677.1| hypothetical protein L484_007723 [Morus notabilis]
          Length = 513

 Score =  665 bits (1716), Expect = 0.0
 Identities = 333/483 (68%), Positives = 394/483 (81%), Gaps = 2/483 (0%)
 Frame = -1

Query: 2161 PLQYFKPQNPDSRARTSDTISGVP--RKRRYISHEYAINLINRERHPEHALEFFNKVSDQ 1988
            P+Q  K  +      T    S +   RK +YISH+ AINLI RER P+ ALE FN VS+Q
Sbjct: 30   PVQLSKASSKKPDPPTESIASSLEGRRKAKYISHDTAINLIKRERDPQRALEIFNSVSEQ 89

Query: 1987 KSFNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHK 1808
            K FNHN  TY+ IL+KLALSKKFG ID+IL QM YETCKFHE IF++LMKHFSK  LH K
Sbjct: 90   KGFNHNGDTYSTILHKLALSKKFGAIDAILRQMMYETCKFHEPIFLNLMKHFSKYALHEK 149

Query: 1807 VLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNIL 1628
            VL+MF+AI+ + R KPSLKAISTCLNLLVEAN+IDLAR FL++++KNL LKPNTCIFNIL
Sbjct: 150  VLEMFHAIRSIAREKPSLKAISTCLNLLVEANRIDLARQFLMHSRKNLSLKPNTCIFNIL 209

Query: 1627 VKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKD 1448
            VK+HC+ GDLE+A  VV+EMK ++ SYP+LITYSTL+DG C  GRL+ AIE+FEEM+SKD
Sbjct: 210  VKHHCRNGDLESAFEVVKEMKKAKISYPNLITYSTLIDGLCVSGRLKGAIELFEEMISKD 269

Query: 1447 QILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDA 1268
            QILPDALT+N+LI+GFCR GKVDRA+KIMEFMK NGC PNVFNYSAL+NG  K GR E+A
Sbjct: 270  QILPDALTFNVLINGFCRDGKVDRARKIMEFMKSNGCSPNVFNYSALINGFFKVGRFEEA 329

Query: 1267 KEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGG 1088
            +EIF EMK+ G +PDKVGYTT+I+  CR+ R DEA+ELLKEMK   CRAD+VTFNVI GG
Sbjct: 330  EEIFYEMKSFGPKPDKVGYTTIINCFCRTGRTDEAMELLKEMKGGECRADVVTFNVIFGG 389

Query: 1087 LCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPH 908
            LCR  R +EAL MLE+LP++G+ LNKASYRIVLN LC++GEL KAT LL LML R  +PH
Sbjct: 390  LCREGRLEEALRMLERLPYEGMHLNKASYRIVLNFLCQKGELKKATSLLDLMLGRGFVPH 449

Query: 907  FATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLD 728
            FATSNELLV LC AG A  AA+ LFGL+E+GFKPEPD+W++LVD+  RERKLL SFQLLD
Sbjct: 450  FATSNELLVRLCNAGMADDAAMALFGLLEMGFKPEPDSWAILVDLISRERKLLSSFQLLD 509

Query: 727  ELI 719
            ELI
Sbjct: 510  ELI 512


>ref|XP_006472504.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475-like
            isoform X1 [Citrus sinensis]
            gi|568836969|ref|XP_006472505.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At5g18475-like isoform X2 [Citrus sinensis]
          Length = 521

 Score =  664 bits (1713), Expect = 0.0
 Identities = 323/486 (66%), Positives = 396/486 (81%), Gaps = 2/486 (0%)
 Frame = -1

Query: 2161 PLQYFKPQNP--DSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQ 1988
            PL+  K   P  D    TSDT     ++ R+ISH  AI+LI  E+ P+ ALE FN VS+Q
Sbjct: 29   PLEVIKANTPKADPPVETSDTCVDARKRSRFISHGAAISLIKCEKEPQCALEIFNTVSEQ 88

Query: 1987 KSFNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHK 1808
            K FNHNN+TYA IL+KLA  KKF  +D++L QMTYETCKFHEGIF++LMKHFS   LH +
Sbjct: 89   KGFNHNNATYATILDKLARYKKFEAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148

Query: 1807 VLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNIL 1628
            VL+MF+ I P+ R KPSLKAISTCLNLL+E+NQ+DLA+ FL  + ++L LKPNTCIFNIL
Sbjct: 149  VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNRHLRLKPNTCIFNIL 208

Query: 1627 VKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKD 1448
            +K+HCK+G LE+A  V++EMK S+ SYP+LITYSTL+DG C+ GR  EAIE+FEEMVSKD
Sbjct: 209  IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268

Query: 1447 QILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDA 1268
            QILPDALTYN+LIDGFC  GKVDRAKKIMEFMK NGC+PNVFNY+ LMNG CKEG+L++A
Sbjct: 269  QILPDALTYNVLIDGFCHGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328

Query: 1267 KEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGG 1088
            KE+F+EMK   ++PD +GYTTLI+  CR+  VDEA+ELLKEMKE GC+AD+VTFN+ILGG
Sbjct: 329  KEVFDEMKNFHLKPDTIGYTTLINCFCRAGGVDEALELLKEMKERGCKADIVTFNIILGG 388

Query: 1087 LCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPH 908
            LCR  R +EAL MLEKL +DG+ LNKASYRIVLN LC++GEL+KA ELL LML R  LPH
Sbjct: 389  LCREGRIEEALGMLEKLWYDGIYLNKASYRIVLNFLCQKGELEKAIELLRLMLCRGFLPH 448

Query: 907  FATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLD 728
            +ATSNELLV LC+AG A  AA+ LFGLVE+GFKPE D+W+LLV++ CR RKLL +F LLD
Sbjct: 449  YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVEMICRGRKLLFAFVLLD 508

Query: 727  ELILQD 710
            EL++++
Sbjct: 509  ELVIKE 514


>ref|XP_006433856.1| hypothetical protein CICLE_v10000867mg [Citrus clementina]
            gi|567882597|ref|XP_006433857.1| hypothetical protein
            CICLE_v10000867mg [Citrus clementina]
            gi|557535978|gb|ESR47096.1| hypothetical protein
            CICLE_v10000867mg [Citrus clementina]
            gi|557535979|gb|ESR47097.1| hypothetical protein
            CICLE_v10000867mg [Citrus clementina]
          Length = 521

 Score =  664 bits (1712), Expect = 0.0
 Identities = 321/486 (66%), Positives = 396/486 (81%), Gaps = 2/486 (0%)
 Frame = -1

Query: 2161 PLQYFKPQNP--DSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQ 1988
            PL+  K   P  D    TSDT     ++ ++ISH  AI+LI  E+ P+ ALE FN VS+Q
Sbjct: 29   PLEVIKANTPKADPPVETSDTCVDARKRSKFISHGAAISLIKCEKEPQRALEIFNTVSEQ 88

Query: 1987 KSFNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHK 1808
            K FNHNN TYA IL+KL   KKF  +D++L QMTYETCKFHEGIF++LMKHFS   LH +
Sbjct: 89   KGFNHNNGTYATILDKLVRYKKFQAVDAVLRQMTYETCKFHEGIFLNLMKHFSNCSLHER 148

Query: 1807 VLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNIL 1628
            VL+MF+ I P+ R KPSLKAISTCLNLL+E+NQ+DLA+ FL  + ++L LKPNTCIFNIL
Sbjct: 149  VLEMFHKIHPITREKPSLKAISTCLNLLIESNQVDLAQNFLKYSNQHLRLKPNTCIFNIL 208

Query: 1627 VKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKD 1448
            +K+HCK+G LE+A  V++EMK S+ SYP+LITYSTL+DG C+ GR  EAIE+FEEMVSKD
Sbjct: 209  IKHHCKRGTLESAFEVLKEMKKSQMSYPNLITYSTLIDGLCKNGRFREAIELFEEMVSKD 268

Query: 1447 QILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDA 1268
            QILPDALTYN+LIDGFCR GKVDRAKKIMEFMK NGC+PNVFNY+ LMNG CKEG+L++A
Sbjct: 269  QILPDALTYNVLIDGFCRGGKVDRAKKIMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEA 328

Query: 1267 KEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGG 1088
            KE+F+EMK   ++PD +GYTTLI+  CR+ RVDEA+ELLKEMKE GC+AD+VTFN+ILGG
Sbjct: 329  KEVFDEMKNFLLKPDTIGYTTLINCFCRAGRVDEALELLKEMKERGCKADIVTFNIILGG 388

Query: 1087 LCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPH 908
            LCR  + +EAL MLEKL +DG+ LNKASYRIVLN  C++GEL+KA ELL LML R  LPH
Sbjct: 389  LCREGKIEEALGMLEKLWYDGIYLNKASYRIVLNFSCQKGELEKAIELLRLMLCRGFLPH 448

Query: 907  FATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLD 728
            +ATSNELLV LC+AG A  AA+ LFGLVE+GFKPE D+W+LLV++ CR RKLL +F+LLD
Sbjct: 449  YATSNELLVRLCKAGMAEDAAIALFGLVEMGFKPESDSWALLVELICRGRKLLFAFELLD 508

Query: 727  ELILQD 710
            EL++++
Sbjct: 509  ELVIKE 514


>gb|EOY33044.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
            cacao] gi|508785789|gb|EOY33045.1| Pentatricopeptide
            repeat superfamily protein isoform 1 [Theobroma cacao]
          Length = 530

 Score =  658 bits (1697), Expect = 0.0
 Identities = 318/486 (65%), Positives = 396/486 (81%), Gaps = 2/486 (0%)
 Frame = -1

Query: 2161 PLQYFKP--QNPDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQ 1988
            PLQ+ K   Q  D       T++   RK R++SHE AINLI RER P+ ALE FN+VS+Q
Sbjct: 29   PLQFLKANSQKRDPPPEIPYTLTESQRKPRFVSHETAINLIKRERDPQRALEIFNRVSEQ 88

Query: 1987 KSFNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHK 1808
            K F+HNN+TY  IL+KL  SKKF  IDSIL QMTYETCKFHEG+F++LMKHFSK  LH +
Sbjct: 89   KGFSHNNATYGTILHKLVQSKKFQAIDSILRQMTYETCKFHEGVFLNLMKHFSKFSLHDR 148

Query: 1807 VLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNIL 1628
            VL+MF AIQP+VR KPSLKAISTCLNLL+E+NQ+DLAR FLLN++K+L L+PNTCIFNIL
Sbjct: 149  VLEMFYAIQPIVREKPSLKAISTCLNLLIESNQVDLARHFLLNSKKSLRLRPNTCIFNIL 208

Query: 1627 VKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKD 1448
            VK+HCK GDLE+A  VV+EMK S  SYP+LITYSTL+ G C  GRL+EAIE+FEEMV+KD
Sbjct: 209  VKHHCKNGDLESAFEVVKEMKKSRVSYPNLITYSTLMGGLCESGRLKEAIELFEEMVAKD 268

Query: 1447 QILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDA 1268
            QILPD LTYN+LI+GFC  GKVDRA+KIMEFMK NGC+PN+FNYS L+NG CKEGR ++A
Sbjct: 269  QILPDVLTYNILINGFCCRGKVDRARKIMEFMKNNGCNPNLFNYSTLINGFCKEGRWQEA 328

Query: 1267 KEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGG 1088
            KE+F EM++ G++PD +GYTTLI+ LCR+++++EA+ELLKEMKE  C+AD+VT NV+LGG
Sbjct: 329  KEVFVEMESIGLKPDTIGYTTLINCLCRAAQIEEAMELLKEMKEKECQADVVTLNVLLGG 388

Query: 1087 LCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPH 908
            LCR  RF +AL MLEKLP++GV LNKASYRIVLNSLC++ E++KA +L+GLML R  +PH
Sbjct: 389  LCREGRFQDALQMLEKLPYEGVYLNKASYRIVLNSLCQKDEMEKAAKLVGLMLDRGFVPH 448

Query: 907  FATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLD 728
            +ATSN+LL+ LC+AG    A   L GL E GFKPEP  W  L ++ C+ERKLL  F+LLD
Sbjct: 449  YATSNDLLIRLCKAGMVDDAVTALVGLAETGFKPEPHCWEFLTELNCKERKLLSVFELLD 508

Query: 727  ELILQD 710
            EL++++
Sbjct: 509  ELVIKE 514


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  652 bits (1682), Expect = 0.0
 Identities = 317/483 (65%), Positives = 388/483 (80%), Gaps = 2/483 (0%)
 Frame = -1

Query: 2161 PLQYFK--PQNPDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQ 1988
            PLQ+ K  P  PDS   TS T+    RK ++ISHE AINLI RE+ P+HALE FN V +Q
Sbjct: 26   PLQFSKAAPLVPDSPTETSSTLVETGRKCKFISHESAINLIKREKDPQHALEIFNMVGEQ 85

Query: 1987 KSFNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHK 1808
            K FNHN++TY+ +++KLA +KKF  +D++LHQMTYETCKFHE IF++LMKHF KS LH +
Sbjct: 86   KGFNHNHATYSTLIHKLAQTKKFHAVDALLHQMTYETCKFHENIFLNLMKHFYKSSLHER 145

Query: 1807 VLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNIL 1628
            VL+MF AIQP+VR KPSLKAISTCLN+LVE+ QIDLA+  LL   ++L ++PNTCIFNIL
Sbjct: 146  VLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNIL 205

Query: 1627 VKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKD 1448
            VK+HCK GDLE+A+ V+ EMK S  SYP++ITYSTL+DG C  GRL+EAIE+FEEMVSKD
Sbjct: 206  VKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKD 265

Query: 1447 QILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDA 1268
            QILPDALTY++LI GFC  GK DRA+KIMEFM+ NGC PNVFNYS LMNG CKEGRLE+A
Sbjct: 266  QILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEA 325

Query: 1267 KEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGG 1088
            KE+F+EMK+ G++PD VGYTTLI+  C   R+DEA+ELLKEM E  C+AD VTFNV+L G
Sbjct: 326  KEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKG 385

Query: 1087 LCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPH 908
            LCR  RFDEAL MLE L ++GV LNK SYRIVLN LC++GEL+K+  LLGLML+R  +PH
Sbjct: 386  LCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPH 445

Query: 907  FATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLD 728
            +ATSNELLV LCEAG    A   LFGL ++GF PEP +W+ L++  CRERKLL  F+L+D
Sbjct: 446  YATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVD 505

Query: 727  ELI 719
            EL+
Sbjct: 506  ELV 508



 Score = 99.8 bits (247), Expect = 5e-18
 Identities = 72/264 (27%), Positives = 125/264 (47%), Gaps = 37/264 (14%)
 Frame = -1

Query: 1810 KVLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNI 1631
            + +++F  +    +  P     S  +       + D AR  +   + N    PN   +++
Sbjct: 253  EAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSN-GCDPNVFNYSV 311

Query: 1630 LVKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSK 1451
            L+   CK+G LE A  V  EMKSS    P  + Y+TL++ FC  GR++EA+E+ +EM   
Sbjct: 312  LMNGFCKEGRLEEAKEVFDEMKSSGLK-PDTVGYTTLINCFCGVGRIDEAMELLKEMTEM 370

Query: 1450 DQILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLED 1271
             +   DA+T+N+L+ G CR G+ D A +++E +   G + N  +Y  ++N LC++G LE 
Sbjct: 371  -KCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEK 429

Query: 1270 AKEIFNEMKAGGVQPD----------------------------KVGYTT-------LID 1196
            +  +   M + G  P                             ++G+T        LI+
Sbjct: 430  SCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIE 489

Query: 1195 YLCRSSRVDEAIELLKEM--KETG 1130
            Y+CR  ++    EL+ E+  KE+G
Sbjct: 490  YICRERKLLFVFELVDELVEKESG 513


>ref|XP_004301354.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At5g18475-like [Fragaria vesca subsp. vesca]
          Length = 568

 Score =  644 bits (1660), Expect = 0.0
 Identities = 305/467 (65%), Positives = 389/467 (83%)
 Frame = -1

Query: 2110 DTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQKSFNHNNSTYAAILNKLAL 1931
            DT +   RK +YISH  AINLI RER P+HALE FN VS+QK FNHNN+TYA ILNKL+ 
Sbjct: 100  DTRTEARRKSKYISHNAAINLIKRERDPQHALEIFNMVSEQKGFNHNNATYATILNKLSQ 159

Query: 1930 SKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVLDMFNAIQPLVRAKPSLK 1751
            SKKF  +D++L+QM Y+TCKFHEGIF++LMKHFSK  +H +VL+MF+AIQP+VR KPSLK
Sbjct: 160  SKKFKAVDAVLYQMKYDTCKFHEGIFLNLMKHFSKFSMHERVLEMFHAIQPIVREKPSLK 219

Query: 1750 AISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVKYHCKKGDLEAAIAVVRE 1571
             ISTCLNLL+EANQ+D+A+ FL++ +K+L+LK NTCI NILVK++CK GDLE+A  VV++
Sbjct: 220  CISTCLNLLIEANQVDMAQQFLMHLKKSLNLKLNTCIANILVKHYCKNGDLESAFEVVKK 279

Query: 1570 MKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQILPDALTYNLLIDGFCRW 1391
            MK S+ SYP+LITYSTL+DG C+ G+L EA+++F+EM+SK+QILPD LTYN+L+ GFCR 
Sbjct: 280  MKKSKLSYPNLITYSTLIDGLCQSGKLTEAMDMFDEMISKEQILPDVLTYNILMKGFCRA 339

Query: 1390 GKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKEIFNEMKAGGVQPDKVGY 1211
            GKVDRA+KI++FMK  GC+PN++NYS LMNG CKE RL++A+E+ +EMK+ G++PD V Y
Sbjct: 340  GKVDRARKILDFMKSKGCNPNIYNYSTLMNGFCKEVRLKEAQELLDEMKSFGIKPDTVVY 399

Query: 1210 TTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGGLCRRCRFDEALNMLEKLPW 1031
            TTLID  CR+ RVDEAIELLKEMKE  C+AD VTFNVILGGLCR CR ++AL ML++LP+
Sbjct: 400  TTLIDCHCRTGRVDEAIELLKEMKERRCKADTVTFNVILGGLCRECRIEDALKMLDELPY 459

Query: 1030 DGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFATSNELLVSLCEAGKATK 851
            +G+ LNK SYRIVLNSL ++G+L+KA ELL LM+ R  +PH+ATSN LLVSLCEAG    
Sbjct: 460  EGIYLNKGSYRIVLNSLYQKGDLNKAKELLRLMMGRGFVPHYATSNGLLVSLCEAGMIDD 519

Query: 850  AAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDELILQD 710
            A   LFGLVE+GFKP  D+W+  V+  CRERKLLP+F+LLDEL+ ++
Sbjct: 520  ATTALFGLVEMGFKPLLDSWAXFVESICRERKLLPAFELLDELVNEE 566


>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  635 bits (1639), Expect = e-179
 Identities = 319/487 (65%), Positives = 384/487 (78%), Gaps = 3/487 (0%)
 Frame = -1

Query: 2161 PLQYFKPQNP--DSRARTSDTISGVPRKR-RYISHEYAINLINRERHPEHALEFFNKVSD 1991
            PLQY    +P  D  A  + T    PRK+ ++ISHE AINLI RE  P+ ALE FN+V++
Sbjct: 96   PLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAE 155

Query: 1990 QKSFNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHH 1811
            Q+ F+HNN+TYA IL+KLA SKKF  ID++LHQMTYETCKFHEGIF++LMKHFSK  LH 
Sbjct: 156  QRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHE 215

Query: 1810 KVLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNI 1631
            +V++MF+AI P+VR KPSLKAISTCLNLLVE+NQ  +                       
Sbjct: 216  RVVEMFDAIXPIVREKPSLKAISTCLNLLVESNQSSIT---------------------- 253

Query: 1630 LVKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSK 1451
                  K GD+++A  VV EMK S  SYP+LITYSTL++G C  GRL+EAIE+FEEMVSK
Sbjct: 254  -----AKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSK 308

Query: 1450 DQILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLED 1271
            DQILPDALTYN LI+GFC   KVDRA KIMEFMKKNGC+PNVFNYSALMNG CKEGRLE+
Sbjct: 309  DQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEE 368

Query: 1270 AKEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILG 1091
            AKE+F+EMK+ G++PD VGYTTLI++ CR+ RVDEA+ELLK+M E  CRAD VTFNVILG
Sbjct: 369  AKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILG 428

Query: 1090 GLCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLP 911
            GLCR  RF+EA  MLE+LP++GV LNKASYRIVLNSLC+EGEL KAT+L+GLML R VLP
Sbjct: 429  GLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLP 488

Query: 910  HFATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLL 731
            HFATSNELLV LCEAGK   A + L GL+ELGFKPEP++W+LLV++ CRERKLLP+F+LL
Sbjct: 489  HFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELL 548

Query: 730  DELILQD 710
            D+L++Q+
Sbjct: 549  DDLVIQE 555


>ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475-like
            [Cucumis sativus] gi|449497032|ref|XP_004160294.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g18475-like [Cucumis sativus]
          Length = 504

 Score =  631 bits (1628), Expect = e-178
 Identities = 304/459 (66%), Positives = 375/459 (81%)
 Frame = -1

Query: 2086 KRRYISHEYAINLINRERHPEHALEFFNKVSDQKSFNHNNSTYAAILNKLALSKKFGYID 1907
            K  YISHE AI LI  ER P+HAL+ FN VS+Q+ FNHN++TYA+I+  LA  KKF  ID
Sbjct: 44   KSSYISHETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAID 103

Query: 1906 SILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVLDMFNAIQPLVRAKPSLKAISTCLNL 1727
             +LHQMTY+TCK HEGIF++LMKHFSKS +H +VLDMF AI+ +VR KPSLKAISTCLNL
Sbjct: 104  GVLHQMTYDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNL 163

Query: 1726 LVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVKYHCKKGDLEAAIAVVREMKSSEASY 1547
            LVE++++DLAR  L+NA+  L+L+PNTCIFNILVK+HC+ GDL+AA  VV+EMKS+  SY
Sbjct: 164  LVESDRVDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSY 223

Query: 1546 PSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQILPDALTYNLLIDGFCRWGKVDRAKK 1367
            P+L+TYSTL+ G C  G+L+EAIE FEEMVSKD ILPDALTYN+LI+GFC+ GKVDRA+ 
Sbjct: 224  PNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRART 283

Query: 1366 IMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKEIFNEMKAGGVQPDKVGYTTLIDYLC 1187
            I+EFMK NGC PNVFNYS LMNG CKEGRL++AKE+FNE+K+ G++PD + YTTLI+ LC
Sbjct: 284  ILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLC 343

Query: 1186 RSSRVDEAIELLKEMKETGCRADMVTFNVILGGLCRRCRFDEALNMLEKLPWDGVILNKA 1007
            R+ RVDEA ELL++MK+  CRAD VTFNV+LGGLCR  RFDEAL+M++KLP++G  LNK 
Sbjct: 344  RTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKG 403

Query: 1006 SYRIVLNSLCKEGELDKATELLGLMLARRVLPHFATSNELLVSLCEAGKATKAAVMLFGL 827
            SYRIVLN L ++GEL KATELLGLML R  +PH ATSN LL+ LC  G    A   L GL
Sbjct: 404  SYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGL 463

Query: 826  VELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDELILQD 710
            +E+GFKPE ++W  LVD+ CRERK+LP F+LLD L+ Q+
Sbjct: 464  LEMGFKPEHESWFTLVDLICRERKMLPVFELLDVLVTQE 502



 Score =  139 bits (351), Expect = 4e-30
 Identities = 87/315 (27%), Positives = 163/315 (51%)
 Frame = -1

Query: 1858 IFIDLMKHFSKSRLHHKVLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLN 1679
            IF  L+KH  ++       ++   ++    + P+L   ST +  L E  ++  A  F   
Sbjct: 192  IFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEE 251

Query: 1678 AQKNLHLKPNTCIFNILVKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRC 1499
                 ++ P+   +NIL+   C++G ++ A  ++  MKS+  S P++  YS L++G+C+ 
Sbjct: 252  MVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCS-PNVFNYSVLMNGYCKE 310

Query: 1498 GRLEEAIEVFEEMVSKDQILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFN 1319
            GRL+EA EVF E+ S   + PD ++Y  LI+  CR G+VD A ++++ MK   C  +   
Sbjct: 311  GRLQEAKEVFNEIKSLG-MKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVT 369

Query: 1318 YSALMNGLCKEGRLEDAKEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMK 1139
            ++ ++ GLC+EGR ++A ++  ++   G   +K  Y  ++++L +   + +A ELL  M 
Sbjct: 370  FNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLML 429

Query: 1138 ETGCRADMVTFNVILGGLCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELD 959
              G      T N +L  LC      +A+  L  L   G      S+  +++ +C+E ++ 
Sbjct: 430  NRGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKML 489

Query: 958  KATELLGLMLARRVL 914
               ELL +++ +  L
Sbjct: 490  PVFELLDVLVTQEYL 504


>ref|XP_002301082.1| hypothetical protein POPTR_0002s10380g [Populus trichocarpa]
            gi|222842808|gb|EEE80355.1| hypothetical protein
            POPTR_0002s10380g [Populus trichocarpa]
          Length = 509

 Score =  630 bits (1625), Expect = e-178
 Identities = 307/456 (67%), Positives = 372/456 (81%)
 Frame = -1

Query: 2089 RKRRYISHEYAINLINRERHPEHALEFFNKVSDQKSFNHNNSTYAAILNKLALSKKFGYI 1910
            RK ++ISHE A+NLI  ER P+HALE FN V +QK FNHN++TY+ I++KLA +KKF  +
Sbjct: 43   RKPKFISHETAVNLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAV 102

Query: 1909 DSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVLDMFNAIQPLVRAKPSLKAISTCLN 1730
            D++L QM YETCKFHE +F++LMK+F+KS    +V++MFN IQP+VR KPSLKAISTCLN
Sbjct: 103  DALLRQMMYETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLN 162

Query: 1729 LLVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVKYHCKKGDLEAAIAVVREMKSSEAS 1550
            LLVE+ Q+DL R FLL+  K+  LKPNTCIFNI +KYHCK GDLE+A AVV+EMK S  S
Sbjct: 163  LLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSIS 222

Query: 1549 YPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQILPDALTYNLLIDGFCRWGKVDRAK 1370
            YP+LITYSTL+DG C  GRL+EAIE+FEEMVSKDQILPDALTYN+LI+GF  WGKVDRAK
Sbjct: 223  YPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAK 282

Query: 1369 KIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKEIFNEMKAGGVQPDKVGYTTLIDYL 1190
            KIMEFMK NGC PNVFNYSALM+G CKEGRLE+A + F EMK  G++ D VGYT LI+Y 
Sbjct: 283  KIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYF 342

Query: 1189 CRSSRVDEAIELLKEMKETGCRADMVTFNVILGGLCRRCRFDEALNMLEKLPWDGVILNK 1010
            CR  R+DEA+ LL+EMKET C+AD+VT NV+L G C   R +EAL ML +L  +G+ LNK
Sbjct: 343  CRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNK 402

Query: 1009 ASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFATSNELLVSLCEAGKATKAAVMLFG 830
            ASYRIVLNSLC++G+LDKA ELLGL L+R  +PH ATSNELLV LC+AG A  A V L+G
Sbjct: 403  ASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYG 462

Query: 829  LVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDEL 722
            L E+GFKPE D+W+LLV+  CRERKLL +F+LLDEL
Sbjct: 463  LAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDEL 498



 Score =  152 bits (384), Expect = 7e-34
 Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 6/373 (1%)
 Frame = -1

Query: 2026 EHALEFFNKVSDQKSFNHNNSTYAAILNKLALSKKFGYIDSIL------HQMTYETCKFH 1865
            E  +E FNK+        +    +  LN L  SK+   +   L      H +   TC F+
Sbjct: 135  ERVVEMFNKIQPIVREKPSLKAISTCLNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFN 194

Query: 1864 EGIFIDLMKHFSKSRLHHKVLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFL 1685
              IFI   K+  KS        +   ++    + P+L   ST ++ L E+ ++  A    
Sbjct: 195  --IFI---KYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELF 249

Query: 1684 LNAQKNLHLKPNTCIFNILVKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFC 1505
                    + P+   +N+L+      G ++ A  ++  MKS+  S P++  YS L+ GFC
Sbjct: 250  EEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNGCS-PNVFNYSALMSGFC 308

Query: 1504 RCGRLEEAIEVFEEMVSKDQILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNV 1325
            + GRLEEA++ FEEM     +  D + Y +LI+ FCR+G++D A  ++E MK+  C  ++
Sbjct: 309  KEGRLEEAMDAFEEMKIFG-LKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADI 367

Query: 1324 FNYSALMNGLCKEGRLEDAKEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKE 1145
               + L+ G C EGR E+A  + N + + G+  +K  Y  +++ LC+   +D+A+ELL  
Sbjct: 368  VTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGL 427

Query: 1144 MKETGCRADMVTFNVILGGLCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGE 965
                G      T N +L GLC+    D+A+  L  L   G    + S+ +++  +C+E +
Sbjct: 428  TLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERK 487

Query: 964  LDKATELLGLMLA 926
            L  A ELL  + A
Sbjct: 488  LLLAFELLDELTA 500



 Score = 96.3 bits (238), Expect = 6e-17
 Identities = 52/178 (29%), Positives = 98/178 (55%)
 Frame = -1

Query: 1660 LKPNTCIFNILVKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEA 1481
            LK +T  + IL+ Y C+ G ++ A+A++ EMK ++     ++T + L+ GFC  GR EEA
Sbjct: 328  LKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCK-ADIVTVNVLLRGFCGEGRTEEA 386

Query: 1480 IEVFEEMVSKDQILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMN 1301
            + +   + S+   L  A +Y ++++  C+ G +D+A +++      G  P+    + L+ 
Sbjct: 387  LGMLNRLSSEGIYLNKA-SYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLV 445

Query: 1300 GLCKEGRLEDAKEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGC 1127
            GLCK G  +DA      +   G +P++  +  L++++CR  ++  A ELL E+    C
Sbjct: 446  GLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERKLLLAFELLDELTANEC 503


>ref|XP_004501623.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475-like
            isoform X1 [Cicer arietinum]
            gi|502133024|ref|XP_004501624.1| PREDICTED:
            pentatricopeptide repeat-containing protein
            At5g18475-like isoform X2 [Cicer arietinum]
          Length = 510

 Score =  628 bits (1619), Expect = e-177
 Identities = 306/484 (63%), Positives = 388/484 (80%), Gaps = 3/484 (0%)
 Frame = -1

Query: 2161 PLQYFKPQ---NPDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSD 1991
            PL + KP+    P+    +++T     RK +YI+H+ AINLI RE+ P+HAL+ FN VS+
Sbjct: 27   PLNFSKPKLDPPPEITLPSNET----RRKNKYITHDVAINLIKREKDPQHALKIFNMVSE 82

Query: 1990 QKSFNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHH 1811
            QK FNHNN+TYA+IL+KLA  KKF  +D +LHQMTYETC+FHEGIFI+LMKH+SK   H 
Sbjct: 83   QKGFNHNNATYASILHKLAQFKKFQAVDRVLHQMTYETCQFHEGIFINLMKHYSKCSFHE 142

Query: 1810 KVLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNI 1631
            KVLD F +IQP+VR KPS KAISTCLNLLV++NQ+DLAR  LL+A+++L  KPN CIFNI
Sbjct: 143  KVLDAFFSIQPIVREKPSPKAISTCLNLLVDSNQVDLARQLLLHAKRSLIYKPNVCIFNI 202

Query: 1630 LVKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSK 1451
            LVKYHC+ GD+E+A  VV EM+ S+ SYP++ITYST++DG CR GRL+EA E+FEEMVSK
Sbjct: 203  LVKYHCRNGDIESAFEVVEEMRKSKYSYPNVITYSTMMDGLCRNGRLKEAFELFEEMVSK 262

Query: 1450 DQILPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLED 1271
            D+I+PD LTYN+LI+GFCR GK DRA+ ++EFMK NGC PNVFNYSAL++GLCK G+L+D
Sbjct: 263  DRIVPDPLTYNVLINGFCRGGKPDRARNVIEFMKSNGCCPNVFNYSALVDGLCKVGKLQD 322

Query: 1270 AKEIFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILG 1091
            AK +F EMK+ G++PD V YT+LI++ CR+ ++DEAIELLKEMKE  C+AD V FNVILG
Sbjct: 323  AKGVFAEMKSSGLKPDTVTYTSLINFFCRNRKIDEAIELLKEMKENECQADTVAFNVILG 382

Query: 1090 GLCRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLP 911
            G+CR  RF+EAL+M+EKLP  GV LNK SYRIVLNSL ++ EL KA +LL LML+R  LP
Sbjct: 383  GMCREGRFEEALDMIEKLPQQGVYLNKGSYRIVLNSLTQKCELRKAKKLLELMLSRGFLP 442

Query: 910  HFATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLL 731
            H+ATSNELL+S C+ G    AA  LF LVE+GF+P  D W LL+++ CR+RKLL  F+LL
Sbjct: 443  HYATSNELLISFCKEGMVDDAAAALFDLVEMGFQPPLDCWELLIELICRDRKLLYVFELL 502

Query: 730  DELI 719
            DEL+
Sbjct: 503  DELV 506


>ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355491987|gb|AES73190.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  626 bits (1615), Expect = e-176
 Identities = 301/481 (62%), Positives = 381/481 (79%)
 Frame = -1

Query: 2161 PLQYFKPQNPDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQKS 1982
            PL + KP  P         ++   +K +YI+H+ AINLI RE+ P+HAL+ FN VS+QK 
Sbjct: 102  PLNFTKPLEPKLDPPPEIVVAETRKKSKYITHDVAINLIKREKDPQHALKIFNMVSEQKG 161

Query: 1981 FNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVL 1802
            FNHNN+TYA IL KLA  KKF  +D +LHQMTYE CKFHEG+FI+LMKH+SK   H KV 
Sbjct: 162  FNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEACKFHEGVFINLMKHYSKCGFHEKVF 221

Query: 1801 DMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVK 1622
            D F +IQ +VR KPS KAIS+CLNLLV++NQ+DL R  LL A+++L  KPN CIFNILVK
Sbjct: 222  DAFLSIQTIVREKPSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVK 281

Query: 1621 YHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQI 1442
            YHC++GD+++A  VV+EM++S+ SYP++ITYSTL+DG CR GRL+EA E+FEEMVSKDQI
Sbjct: 282  YHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQI 341

Query: 1441 LPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKE 1262
            +PD LTYN+LI+GFCR GK DRA+ ++EFMK NGC PNVFNYSAL++GLCK G+L+DAK 
Sbjct: 342  VPDPLTYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKG 401

Query: 1261 IFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGGLC 1082
            +  EMK+ G++PD + YT+LI++  R+ ++DEAIELL EMKE  C+AD VTFNVILGGLC
Sbjct: 402  VLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLC 461

Query: 1081 RRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFA 902
            R  RFDEAL+M+EKLP  GV LNK SYRIVLNSL +  EL KA +LLGLML+R  +PH+A
Sbjct: 462  REGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYA 521

Query: 901  TSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDEL 722
            TSNELLV LC+ G A  AA  LF LV++GF+P+ D+W LL+D+ CR+RKLL  F+LLDEL
Sbjct: 522  TSNELLVRLCKEGMANDAATALFDLVDMGFQPQHDSWELLIDLICRDRKLLYVFELLDEL 581

Query: 721  I 719
            +
Sbjct: 582  V 582


>ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18475-like
            [Glycine max]
          Length = 546

 Score =  620 bits (1598), Expect = e-174
 Identities = 297/482 (61%), Positives = 384/482 (79%)
 Frame = -1

Query: 2161 PLQYFKPQNPDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQKS 1982
            PL++ K   P       + +   PRKR++ISH+ AI+LI RE+ P+HAL  FN VS+Q  
Sbjct: 68   PLKFTKADPPP------EPLPSPPRKRKHISHDSAIDLIKREKDPQHALNIFNMVSEQNG 121

Query: 1981 FNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVL 1802
            F HNN+TYA IL+KLA    F  +D +LHQMTYETCKFHEGIF++LMKHFSKS LH K+L
Sbjct: 122  FQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHEGIFVNLMKHFSKSSLHEKLL 181

Query: 1801 DMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVK 1622
              + +IQP+VR KPS KA+STCLNLL+++N++DLAR  LL+A+++L  KPN C+FNILVK
Sbjct: 182  HAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDLARKLLLHAKRDLTRKPNVCVFNILVK 241

Query: 1621 YHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQI 1442
            YHCK GDL++A  +V EM++SE SYP+L+TYSTL+DG CR GR++EA ++FEEMVS+D I
Sbjct: 242  YHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHI 301

Query: 1441 LPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKE 1262
            +PD LTYN+LI+GFCR GK DRA+ +++FMK NGC+PNV+NYSAL++GLCK G+LEDAK 
Sbjct: 302  VPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKG 361

Query: 1261 IFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGGLC 1082
            +  E+K  G++PD V YT+LI++LCR+ + DEAIELL+EMKE GC+AD VTFNV+LGGLC
Sbjct: 362  VLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLC 421

Query: 1081 RRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFA 902
            R  +F+EAL+M+EKLP  GV LNK SYRIVLNSL ++ EL +A ELLGLML R   PH+A
Sbjct: 422  REGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYA 481

Query: 901  TSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDEL 722
            TSNELLV LC+AG    AAV LF LVE+GF+P  +TW +L+ + CRERKLL  F+LLDEL
Sbjct: 482  TSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVFELLDEL 541

Query: 721  IL 716
            ++
Sbjct: 542  VV 543



 Score = 91.3 bits (225), Expect = 2e-15
 Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 35/261 (13%)
 Frame = -1

Query: 1810 KVLDMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNI 1631
            +  D+F  +       P     +  +N      + D AR  ++   K+    PN   ++ 
Sbjct: 287  EAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARN-VIQFMKSNGCYPNVYNYSA 345

Query: 1630 LVKYHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSK 1451
            LV   CK G LE A  V+ E+K S    P  +TY++L++  CR G+ +EAIE+ EEM  +
Sbjct: 346  LVDGLCKVGKLEDAKGVLAEIKGSGLK-PDAVTYTSLINFLCRNGKSDEAIELLEEM-KE 403

Query: 1450 DQILPDALTYNLLIDGFCRWGKVD-----------------------------------R 1376
            +    D++T+N+L+ G CR GK +                                   R
Sbjct: 404  NGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKR 463

Query: 1375 AKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKEIFNEMKAGGVQPDKVGYTTLID 1196
            AK+++  M + G  P+    + L+  LCK G ++DA     ++   G QP    +  LI 
Sbjct: 464  AKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIG 523

Query: 1195 YLCRSSRVDEAIELLKEMKET 1133
             +CR  ++    ELL E+  T
Sbjct: 524  LICRERKLLYVFELLDELVVT 544


>gb|ESW09636.1| hypothetical protein PHAVU_009G143500g, partial [Phaseolus vulgaris]
          Length = 742

 Score =  607 bits (1564), Expect = e-170
 Identities = 299/471 (63%), Positives = 370/471 (78%)
 Frame = -1

Query: 2161 PLQYFKPQNPDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQKS 1982
            PL++ KP  P       +T    PRKR++ISH+ AINLI RE+ P+ AL+ FN VS QK 
Sbjct: 34   PLKFTKPAQPKPDP-PPETAVEPPRKRKFISHDGAINLIKREKDPQLALKIFNMVSQQKG 92

Query: 1981 FNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVL 1802
            F HNN+TYA IL KLA   KF  +D +LHQMTYETCKFHEGIF++LM HFSKS LH KVL
Sbjct: 93   FQHNNATYATILEKLARCNKFHAVDRVLHQMTYETCKFHEGIFVNLMSHFSKSSLHDKVL 152

Query: 1801 DMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVK 1622
              F +IQP+VR KPS KA++TCLNLL+++N++DLAR  LL+A++ L  KPN CIFNILVK
Sbjct: 153  QAFFSIQPIVRDKPSPKALTTCLNLLLDSNRVDLARKLLLHAKRGLTHKPNVCIFNILVK 212

Query: 1621 YHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQI 1442
            YHCK GDLE+A  VV+EM+SSE SYP+LITYSTL+DG CR GRL EA ++FEEMVS+D I
Sbjct: 213  YHCKNGDLESAFEVVKEMRSSEFSYPNLITYSTLMDGLCRNGRLREAFQLFEEMVSRDHI 272

Query: 1441 LPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKE 1262
            +PD LTYN+LI+GFCR GK D A+ ++EFMK NGC+PNV+NYSAL+NGLC+ G+LEDAK 
Sbjct: 273  VPDPLTYNVLINGFCREGKPDHARNVIEFMKSNGCYPNVYNYSALVNGLCRIGKLEDAKG 332

Query: 1261 IFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGGLC 1082
            +  EMK  G++PD V YT+LI+YLCR+ +V EAI+LL+EMKE   +AD V FN+ILGGLC
Sbjct: 333  VLAEMKNSGLKPDAVTYTSLINYLCRNGQVGEAIQLLEEMKENKIQADTVVFNLILGGLC 392

Query: 1081 RRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFA 902
            R  RF+EAL+MLEKLP  GV LNK SYRIVLNSL + GEL  A ELLGLML+R  LPH+A
Sbjct: 393  REDRFEEALDMLEKLPQQGVYLNKGSYRIVLNSLIQNGELKSAKELLGLMLSRGFLPHYA 452

Query: 901  TSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLL 749
            +SNELLV LC+ G A  AA  LF LVE+GF+P  ++W +L+ + CR+RKLL
Sbjct: 453  SSNELLVCLCKGGMADDAARALFDLVEMGFQPGLESWEILIGLICRDRKLL 503



 Score =  122 bits (306), Expect = 7e-25
 Identities = 98/347 (28%), Positives = 172/347 (49%), Gaps = 9/347 (2%)
 Frame = -1

Query: 1735 LNLLVEANQIDLA-RMFLLNAQKNLHLKPNTCIFNILVKY-HCKKGDLEAAIAVVREMKS 1562
            +NL+       LA ++F + +Q+      N     IL K   C K    A   V+ +M  
Sbjct: 68   INLIKREKDPQLALKIFNMVSQQKGFQHNNATYATILEKLARCNK--FHAVDRVLHQMTY 125

Query: 1561 SEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEM--VSKDQILPDALT--YNLLIDGFCR 1394
                +   I +  L+  F +    ++ ++ F  +  + +D+  P ALT   NLL+D    
Sbjct: 126  ETCKFHEGI-FVNLMSHFSKSSLHDKVLQAFFSIQPIVRDKPSPKALTTCLNLLLDS--- 181

Query: 1393 WGKVDRAKKIMEFMKKNGCH-PNVFNYSALMNGLCKEGRLEDAKEIFNEMKAGGVQ-PDK 1220
              +VD A+K++   K+   H PNV  ++ L+   CK G LE A E+  EM++     P+ 
Sbjct: 182  -NRVDLARKLLLHAKRGLTHKPNVCIFNILVKYHCKNGDLESAFEVVKEMRSSEFSYPNL 240

Query: 1219 VGYTTLIDYLCRSSRVDEAIELLKEM-KETGCRADMVTFNVILGGLCRRCRFDEALNMLE 1043
            + Y+TL+D LCR+ R+ EA +L +EM        D +T+NV++ G CR  + D A N++E
Sbjct: 241  ITYSTLMDGLCRNGRLREAFQLFEEMVSRDHIVPDPLTYNVLINGFCREGKPDHARNVIE 300

Query: 1042 KLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFATSNELLVSLCEAG 863
             +  +G   N  +Y  ++N LC+ G+L+ A  +L  M    + P   T   L+  LC  G
Sbjct: 301  FMKSNGCYPNVYNYSALVNGLCRIGKLEDAKGVLAEMKNSGLKPDAVTYTSLINYLCRNG 360

Query: 862  KATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDEL 722
            +  +A  +L  + E   + +   ++L++   CRE +   +  +L++L
Sbjct: 361  QVGEAIQLLEEMKENKIQADTVVFNLILGGLCREDRFEEALDMLEKL 407



 Score =  117 bits (293), Expect = 2e-23
 Identities = 64/238 (26%), Positives = 130/238 (54%), Gaps = 2/238 (0%)
 Frame = -1

Query: 1438 PDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNG-CHPNVFNYSALMNGLCKEGRLEDAKE 1262
            P+   +N+L+   C+ G ++ A ++++ M+ +   +PN+  YS LM+GLC+ GRL +A +
Sbjct: 202  PNVCIFNILVKYHCKNGDLESAFEVVKEMRSSEFSYPNLITYSTLMDGLCRNGRLREAFQ 261

Query: 1261 IFNEMKAGG-VQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGGL 1085
            +F EM +   + PD + Y  LI+  CR  + D A  +++ MK  GC  ++  ++ ++ GL
Sbjct: 262  LFEEMVSRDHIVPDPLTYNVLINGFCREGKPDHARNVIEFMKSNGCYPNVYNYSALVNGL 321

Query: 1084 CRRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHF 905
            CR  + ++A  +L ++   G+  +  +Y  ++N LC+ G++ +A +LL  M   ++    
Sbjct: 322  CRIGKLEDAKGVLAEMKNSGLKPDAVTYTSLINYLCRNGQVGEAIQLLEEMKENKIQADT 381

Query: 904  ATSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLL 731
               N +L  LC   +  +A  ML  L + G      ++ ++++   +  +L  + +LL
Sbjct: 382  VVFNLILGGLCREDRFEEALDMLEKLPQQGVYLNKGSYRIVLNSLIQNGELKSAKELL 439


>ref|XP_006287559.1| hypothetical protein CARUB_v10000770mg [Capsella rubella]
            gi|565459122|ref|XP_006287560.1| hypothetical protein
            CARUB_v10000770mg [Capsella rubella]
            gi|482556265|gb|EOA20457.1| hypothetical protein
            CARUB_v10000770mg [Capsella rubella]
            gi|482556266|gb|EOA20458.1| hypothetical protein
            CARUB_v10000770mg [Capsella rubella]
          Length = 506

 Score =  528 bits (1360), Expect = e-147
 Identities = 257/476 (53%), Positives = 351/476 (73%)
 Frame = -1

Query: 2146 KPQNPDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQKSFNHNN 1967
            K + P+S   +S +      K ++ISH  AI L+ RER P+ +L+ FN+ S QK FNHNN
Sbjct: 30   KMKKPNSPPESSISPLETNPKTKFISHASAIELMRRERDPQRSLDIFNRASQQKGFNHNN 89

Query: 1966 STYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVLDMFNA 1787
            +TY+ +L+ L   KKF  +D+ILHQM YETC+F E +F++LM+HFS+  LH KV+DMFN 
Sbjct: 90   ATYSVLLDNLVRHKKFLAVDAILHQMRYETCRFEESLFLNLMRHFSRFDLHDKVMDMFNL 149

Query: 1786 IQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVKYHCKK 1607
            IQ + R KPSLK+ISTCLNLL++A +I+LAR  LL A+ NL L+PNTCIFNILVK+HCK 
Sbjct: 150  IQVIARVKPSLKSISTCLNLLIDAGEINLARNLLLYAKHNLGLQPNTCIFNILVKHHCKN 209

Query: 1606 GDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQILPDAL 1427
            GD+++A  VV EMK S  SYP+ ITYSTL+D      R +EA+E+FE+M+SK+ ILPD +
Sbjct: 210  GDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGILPDPV 269

Query: 1426 TYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKEIFNEM 1247
            T+N++I+GFCR G+V RA+ I++FMKKNGC+PNV+NYSALMNG CKEG +++AK IFNE+
Sbjct: 270  TFNVMINGFCRSGEVKRAEMILDFMKKNGCNPNVYNYSALMNGFCKEGNIQEAKRIFNEV 329

Query: 1246 KAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGGLCRRCRF 1067
            K  G++ D VGYTTL++ LC++  +DEA++LL EMK + CR D +T NVIL GL    R 
Sbjct: 330  KEVGLRLDTVGYTTLMNCLCKNGAIDEAMKLLGEMKASRCRVDALTCNVILKGLSSEGRS 389

Query: 1066 DEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFATSNEL 887
            +EAL ML++   +GV L+K SYRI+LN LC  G+L+KA + L +M  R + PH AT NEL
Sbjct: 390  EEALQMLDQWGCEGVHLDKGSYRIILNGLCHNGKLEKAVKFLSVMSERGMWPHHATWNEL 449

Query: 886  LVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDELI 719
            +V LC +G A     +L G +++G +PEP +W  +V+  CRERKL+  F+LLD L+
Sbjct: 450  VVRLCGSGNAEMGVRVLIGFLKIGLQPEPSSWRAVVESSCRERKLVHVFELLDSLV 505


>ref|XP_006403586.1| hypothetical protein EUTSA_v10010303mg [Eutrema salsugineum]
            gi|557104705|gb|ESQ45039.1| hypothetical protein
            EUTSA_v10010303mg [Eutrema salsugineum]
          Length = 505

 Score =  527 bits (1358), Expect = e-147
 Identities = 257/481 (53%), Positives = 355/481 (73%)
 Frame = -1

Query: 2161 PLQYFKPQNPDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQKS 1982
            P+ + +   PD    +S +      K ++ISHE A+NLI  ER P+ AL+ FN +S QK 
Sbjct: 24   PICFTEKTKPDPPPESSISHVETNPKTKFISHESAVNLIKCERDPQCALDVFNILSRQKG 83

Query: 1981 FNHNNSTYAAILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVL 1802
            FNHN++TY+ +L+ L   KKF  +D+IL+QM YETC+F EG+F++LM+H+S+  LH KV+
Sbjct: 84   FNHNSATYSVLLDNLVRHKKFQAVDAILNQMKYETCRFQEGVFLNLMRHYSRFDLHEKVM 143

Query: 1801 DMFNAIQPLVRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVK 1622
            +MFN I  + R KPSL AISTCLNLL+++ ++DLAR  LL A+ +L L+PNTCIFNILVK
Sbjct: 144  EMFNLILMIARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKNHLGLQPNTCIFNILVK 203

Query: 1621 YHCKKGDLEAAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQI 1442
            +HCK GD+++A  VV EM+    SYP+LITYSTL++      R +EA+E+FE+M+S + I
Sbjct: 204  HHCKNGDVDSAFRVVEEMRRFGISYPNLITYSTLIECLFAHSRSKEAMELFEDMISNEGI 263

Query: 1441 LPDALTYNLLIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKE 1262
             PD +T+N++I+GFCR G+V+RAK I+EFMKKNGC+PNVFNYSALMNG CKEG++++AK 
Sbjct: 264  SPDPVTFNVMINGFCRAGQVERAKMIIEFMKKNGCNPNVFNYSALMNGFCKEGKIQEAKL 323

Query: 1261 IFNEMKAGGVQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGGLC 1082
            IF+E+K  G++ D VGYTTL++ LC++ ++DEA+ELL EMK +GC+AD +T+NVIL GL 
Sbjct: 324  IFDEVKETGLKLDTVGYTTLMNCLCKNGQIDEAMELLVEMKASGCKADALTYNVILRGLS 383

Query: 1081 RRCRFDEALNMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFA 902
               R ++AL ML +   +GV LNK SYRI+LN+LCK GEL+KA E L LM  + V PH A
Sbjct: 384  SEGRAEQALEMLGQWGCEGVHLNKGSYRIILNALCKNGELEKAVEFLSLMSKKGVWPHHA 443

Query: 901  TSNELLVSLCEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDEL 722
            T NEL+V LC +G A     +L G + +GFKPEP +W  +V   C+ERKLL   +L+D L
Sbjct: 444  TWNELVVQLCGSGNADIGVRVLKGFLGIGFKPEPQSWGAVVGSVCKERKLLHVIELVDSL 503

Query: 721  I 719
            +
Sbjct: 504  V 504


>ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297319733|gb|EFH50155.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 507

 Score =  527 bits (1358), Expect = e-147
 Identities = 255/471 (54%), Positives = 348/471 (73%)
 Frame = -1

Query: 2134 PDSRARTSDTISGVPRKRRYISHEYAINLINRERHPEHALEFFNKVSDQKSFNHNNSTYA 1955
            P+S   T +T      K ++ISHE  ++L+ RER P+ AL+ FNK S QK FNHNN+TY+
Sbjct: 39   PESSISTMETNP----KTKFISHESTVSLMKRERDPQRALDIFNKASQQKGFNHNNATYS 94

Query: 1954 AILNKLALSKKFGYIDSILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVLDMFNAIQPL 1775
             +L+ L   KKF  +D+ILHQM YETC+F E +F++LM+HFS+  LH KV++MFN IQ +
Sbjct: 95   VLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVI 154

Query: 1774 VRAKPSLKAISTCLNLLVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVKYHCKKGDLE 1595
             R KPSL AISTCLNLL+++ ++DLAR  LL A+ NL L+PNTCIFNILVK+HCK GD++
Sbjct: 155  ARVKPSLNAISTCLNLLIDSGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDID 214

Query: 1594 AAIAVVREMKSSEASYPSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQILPDALTYNL 1415
            +A  VV EMK S  SYP+ ITYSTL+D      R +EA+E+FE+M+SK  I PD + +N+
Sbjct: 215  SAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNV 274

Query: 1414 LIDGFCRWGKVDRAKKIMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKEIFNEMKAGG 1235
            +I+GFCR G+V+RAK I++FMKKNGC+PNV+NYSALMNG CKEG++++AK++F+E+K  G
Sbjct: 275  MINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTG 334

Query: 1234 VQPDKVGYTTLIDYLCRSSRVDEAIELLKEMKETGCRADMVTFNVILGGLCRRCRFDEAL 1055
            ++ D VGYTTL++ LCR+  +DEA++LL EMK + CRAD +T+NVIL GL    R +EAL
Sbjct: 335  LKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEAL 394

Query: 1054 NMLEKLPWDGVILNKASYRIVLNSLCKEGELDKATELLGLMLARRVLPHFATSNELLVSL 875
             ML++   +GV LNK SYRI+LN+LC  GEL+KA + L +M  R + PH AT NEL+V L
Sbjct: 395  QMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRL 454

Query: 874  CEAGKATKAAVMLFGLVELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDEL 722
            CE+G       +L G + +G  P P +W  +V+  C+ERKL+  F+LLD L
Sbjct: 455  CESGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKERKLVHVFELLDSL 505


>ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g18475 gi|110737103|dbj|BAF00503.1| hypothetical
            protein [Arabidopsis thaliana]
            gi|332005185|gb|AED92568.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 506

 Score =  523 bits (1346), Expect = e-145
 Identities = 250/456 (54%), Positives = 341/456 (74%)
 Frame = -1

Query: 2086 KRRYISHEYAINLINRERHPEHALEFFNKVSDQKSFNHNNSTYAAILNKLALSKKFGYID 1907
            K ++ISHE A++L+ RER P+  L+ FNK S QK FNHNN+TY+ +L+ L   KKF  +D
Sbjct: 50   KTKFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVD 109

Query: 1906 SILHQMTYETCKFHEGIFIDLMKHFSKSRLHHKVLDMFNAIQPLVRAKPSLKAISTCLNL 1727
            +ILHQM YETC+F E +F++LM+HFS+S LH KV++MFN IQ + R KPSL AISTCLNL
Sbjct: 110  AILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNL 169

Query: 1726 LVEANQIDLARMFLLNAQKNLHLKPNTCIFNILVKYHCKKGDLEAAIAVVREMKSSEASY 1547
            L+++ +++L+R  LL A+ NL L+PNTCIFNILVK+HCK GD+  A  VV EMK S  SY
Sbjct: 170  LIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISY 229

Query: 1546 PSLITYSTLVDGFCRCGRLEEAIEVFEEMVSKDQILPDALTYNLLIDGFCRWGKVDRAKK 1367
            P+ ITYSTL+D      R +EA+E+FE+M+SK+ I PD +T+N++I+GFCR G+V+RAKK
Sbjct: 230  PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289

Query: 1366 IMEFMKKNGCHPNVFNYSALMNGLCKEGRLEDAKEIFNEMKAGGVQPDKVGYTTLIDYLC 1187
            I++FMKKNGC+PNV+NYSALMNG CK G++++AK+ F+E+K  G++ D VGYTTL++  C
Sbjct: 290  ILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFC 349

Query: 1186 RSSRVDEAIELLKEMKETGCRADMVTFNVILGGLCRRCRFDEALNMLEKLPWDGVILNKA 1007
            R+   DEA++LL EMK + CRAD +T+NVIL GL    R +EAL ML++   +GV LNK 
Sbjct: 350  RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKG 409

Query: 1006 SYRIVLNSLCKEGELDKATELLGLMLARRVLPHFATSNELLVSLCEAGKATKAAVMLFGL 827
            SYRI+LN+LC  GEL+KA + L +M  R + PH AT NEL+V LCE+G       +L G 
Sbjct: 410  SYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGF 469

Query: 826  VELGFKPEPDTWSLLVDVFCRERKLLPSFQLLDELI 719
            + +G  P P +W  +V+  C+ERKL+  F+LLD L+
Sbjct: 470  LRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505