BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00024946
         (2060 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   483   e-133
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   477   e-131
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...   475   e-131
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   475   e-131
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   472   e-130
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   455   e-125
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...   448   e-123
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...   444   e-122
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   440   e-120
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...   439   e-120
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]   437   e-120
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   426   e-116
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   424   e-116
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   419   e-114
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   418   e-114
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   416   e-113
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   413   e-112
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]   409   e-111
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   407   e-111
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   407   e-110

>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  483 bits (1244), Expect = e-133
 Identities = 261/627 (41%), Positives = 363/627 (57%), Gaps = 31/627 (4%)
 Frame = -2

Query: 2059 DNLRFGTMRSQILNQEPLPGLDNVFSAALREE-------------------------GHH 1955
            D  RFG + + ++N +PLP L  ++S  +REE                          HH
Sbjct: 209  DESRFGGLCATLINMDPLPSLGEIYSRVIREEQRLASVHVREQKEEAVGFLARREQLDHH 268

Query: 1954 QVSSDQSTKPEASAFAVRNS--KGKSVTCDHCGKTGHERNQCWELIGYPP---DRKPNSV 1790
                  S++ E +  +  NS  KG+ VTC +CG+TGHE+ +CW+++G+P    +R     
Sbjct: 269  SRVDASSSRSEHTGGSRSNSIIKGR-VTCSNCGRTGHEKKECWQIVGFPDWWSERNGGRG 327

Query: 1789 KHMNRRKKPIYNGETGKANAVQVEDSVEQEEHGKAFNISKGMIPLKELAAE-IYSMIKEQ 1613
             +   R     NG  G+   +    +         F   + M  L +L  E   S     
Sbjct: 328  SNGRGRGGRGSNGGRGQGQVMAAHATSSNSSVFPEFT-EEHMRVLSQLVKEKSNSGSTSN 386

Query: 1612 KTQENVSGTALLASKLFWVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQA 1433
               + +SG   L      +LDSGASHHMT  L+ L  +  +P P  +   +G        
Sbjct: 387  NNSDRLSGKTKLGDI---ILDSGASHHMTGTLSSLTNVVPVP-PCPVGFADGSKAFALSV 442

Query: 1432 GTVKLNENLTLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGE 1253
            G + L+  ++L  VL+ PS  C LISV  L +   CL T++   C +QD +++ LIGSGE
Sbjct: 443  GVLTLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGE 502

Query: 1252 LRDGVYYLKGVTDKGIVAVARRTDGIIWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCD 1073
             R GVYYL  VT   I      +D  +WH RLGHPS   L+SLP  +K    T    +CD
Sbjct: 503  ERGGVYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLPLFSKTS-STVTSHSCD 561

Query: 1072 ICHRAKQTRQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYL 893
            +C RAKQTR+ FP S+NK  + F+LIHCD+WG Y+ P   G  YFL I+DDYSRAVW YL
Sbjct: 562  VCFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYL 621

Query: 892  LKEKSDTSQLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQ 713
            L EKS+  Q++  F    + Q+   ++  RSDNG EFMCLS YF +NGIIH+T+C  TPQ
Sbjct: 622  LLEKSEVRQVLTNFLKYAEKQFGKTVKMVRSDNGTEFMCLSSYFRENGIIHQTSCVGTPQ 681

Query: 712  QNGRVERKNRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLK 533
            QNGRVERK+RH+LNVARAL F+A+LP+KFWG+ +LTAAY+INRTP+ +L G+TPYE L  
Sbjct: 682  QNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHG 741

Query: 532  TTPSYDHMKVFGCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISR 353
            + P Y  ++VFG  CY + +   KDKF  RS  CIF+GYP G+KGWK+Y++E ++ L+SR
Sbjct: 742  SKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSR 801

Query: 352  DVIFLEDVKPFLSRTDTSPSPSHLPVL 272
            DVIF E+V P+     ++ + + LP +
Sbjct: 802  DVIFREEVFPYAGVNSSTLASTSLPTV 828


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  477 bits (1227), Expect = e-131
 Identities = 259/615 (42%), Positives = 371/615 (60%), Gaps = 24/615 (3%)
 Frame = -2

Query: 2050 RFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQST-KPEASAFAVRNS-----KG 1889
            RF ++RS I + EPLP L  V+S  +REE +   S  +   K EA  F+V++S     + 
Sbjct: 195  RFSSIRSSITDIEPLPDLYQVYSRVVREEQNLNASRTKDVVKTEAIGFSVQSSTTPRFRD 254

Query: 1888 KSVT-CDHCGKTGHERNQCWELIGYP-------PDRKPNSVKHMNRRKKPIYNGETGKAN 1733
            KS   C HC + GHE  QC+ + GYP       P     S +      +   +G  G  +
Sbjct: 255  KSTLFCTHCNRKGHEVTQCFLVHGYPDWWLEQNPQENQPSTRGRGSNGRGSSSGRGGNRS 314

Query: 1732 AVQVEDSVEQEEHGKAFNISKGMIPLK----ELAAEIYSMIKEQK---TQENVSGTALLA 1574
            +            G+A N       +     +  A++ S+++ Q+   + E +SG   L 
Sbjct: 315  SAPTTRG-----RGRANNAQAAAPTVSGDGNDQIAQLISLLQAQRPSSSSERLSGNTCLT 369

Query: 1573 SKLFWVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTLNR 1394
                 V+D+GASHHMT   +IL  + D+  P  ++ P+GK     + GT+ L+++  L+ 
Sbjct: 370  DG---VIDTGASHHMTGDCSILVDVFDIT-PSPVTKPDGKASQATKCGTLLLHDSYKLHD 425

Query: 1393 VLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKGVTD 1214
            VL+ P F+C LISV  L +  + +  ++   C +QD   R LIG+GE R+GVYY  GV  
Sbjct: 426  VLFVPDFDCTLISVSKLLKQTSSIAIFTDTFCFLQDRFLRTLIGAGEEREGVYYFTGVLA 485

Query: 1213 KGIVAVAR--RTDGIIWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHRAKQTRQP 1040
              +   +      G +WH RLGHPS   L SLP   +         +CD C R+KQTR+ 
Sbjct: 486  PRVHKASSDFAISGDLWHRRLGHPSTSVLLSLPECNRSSQGFDKIDSCDTCFRSKQTREV 545

Query: 1039 FPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLI 860
            FP+S NK  + F+LIH D+WG Y+TP+ TG  YFL ++DDYSR+VW YL+  K++ SQLI
Sbjct: 546  FPISNNKTMECFSLIHGDVWGPYRTPSTTGAVYFLTLVDDYSRSVWTYLMSSKTEVSQLI 605

Query: 859  KQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERKNRH 680
            K F AM + Q+  +++ FR+DNG EFMCL+ YF  +GI+H+T+C  TPQQNGRVERK+RH
Sbjct: 606  KNFCAMSERQFGKQVKAFRTDNGTEFMCLTPYFQTHGILHQTSCVDTPQQNGRVERKHRH 665

Query: 679  LLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVF 500
            +LNVARA  F+ NLP+KFWG+ +LTA ++INRTP+ +L+GKTPYE L    PSYD ++ F
Sbjct: 666  ILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPYELLFGERPSYDMLRSF 725

Query: 499  GCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPF 320
            GCLCYA++   +KDKF SRS +C+FIGYP G+K W++Y+LET K+  SRDV F ED+ P+
Sbjct: 726  GCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFHEDIYPY 785

Query: 319  LSRTDTS-PSPSHLP 278
             + T ++ P P   P
Sbjct: 786  ATATQSNVPLPPPTP 800


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score =  475 bits (1222), Expect = e-131
 Identities = 257/635 (40%), Positives = 373/635 (58%), Gaps = 24/635 (3%)
 Frame = -2

Query: 2059 DNLRFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQSTKPEASAFAVRNSK---- 1892
            D   +G ++S +L++ PLP L+  ++A  ++E    +S   + + +  +FAV+ +     
Sbjct: 192  DESVYGAVKSALLSRVPLPSLEEAYNALTQDEESKSLSRLHNERVDGVSFAVQTTSRPRD 251

Query: 1891 -GKSVTCDHCGKTGHERNQCWELIGYPPDRKPN-SVKHMNRRKKPIYNGETGKANAVQVE 1718
              ++  C +CG+ GH   QC++LIGYPP  +    +K+     +   +   GK +  +  
Sbjct: 252  SSENRVCSNCGRVGHLAEQCFKLIGYPPWLEEKLRLKNTASSSRGGLSSFKGKQSHGRGS 311

Query: 1717 DSVEQEEHGKAFNISKGMIPLKELAAE---------------IYSMIKEQKTQEN--VSG 1589
                    G A N+         L ++               + ++++E+K+  N   SG
Sbjct: 312  SINHVASSGMAANVVTNSSLTSPLTSDDRIGLSGLNDSQWKILQTILEERKSTSNDHQSG 371

Query: 1588 TALLASKLFWVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNEN 1409
               L S   W++DSGA++HMT  LA L  + D+P P+ I LP+G+     + G+V+L  +
Sbjct: 372  KYFLES---WIIDSGATNHMTGSLAFLRNVCDMP-PVLIKLPDGRFTTATKQGSVQLGSS 427

Query: 1408 LTLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYL 1229
            L L  VL+     C+LISV  LTR   C+   +   C +QD TT  LIG+G   +G+Y+ 
Sbjct: 428  LDLQDVLFVDGLHCHLISVSQLTRTRRCIFQITDKVCIVQDRTTLMLIGAGRELNGLYFF 487

Query: 1228 KGVTDKGIVAVARRTDGIIWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHRAKQT 1049
            +GV     V         +WH RLGHPS  +L  LPF + +   T   + C+IC +AKQT
Sbjct: 488  RGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLPF-SDVTSSTFDSKTCEICIQAKQT 546

Query: 1048 RQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTS 869
            R PFPLS NK +  F L+HCDLWG Y+T ++ G  YFL ++DDYSRAVW+YLL  K +  
Sbjct: 547  RDPFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFLTLVDDYSRAVWLYLLPSKQEAP 606

Query: 868  QLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERK 689
            + +K F A+V+ QY   I+  RSDNG EF+CLS++F   GIIHET+C  TPQQNGRVERK
Sbjct: 607  KHLKNFIALVERQYTTNIKMIRSDNGSEFICLSDFFAQKGIIHETSCVGTPQQNGRVERK 666

Query: 688  NRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHM 509
            +RH+LNVARALRF++ LP++FW  C LTAAY+INRTPT LL+GKTP+E +    P   H+
Sbjct: 667  HRHILNVARALRFQSGLPIEFWSYCALTAAYLINRTPTPLLKGKTPFELIYNRPPPLQHI 726

Query: 508  KVFGCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDV 329
            ++FGC+CY + +    DKF SRS + IF+GYP  +KGW++YN+ET  V +SRDV+F E  
Sbjct: 727  RIFGCICYVHNLKHGGDKFASRSNKSIFLGYPFAKKGWRVYNIETGVVSVSRDVVFRETE 786

Query: 328  KPF-LSRTDTSPSPSHLPVLQSPCGADESPTQPHV 227
              F +S  D+SPS    PVL      +E    P V
Sbjct: 787  FHFPISVMDSSPSLD--PVLVDSSELEEISMTPPV 819


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  475 bits (1222), Expect = e-131
 Identities = 251/615 (40%), Positives = 368/615 (59%), Gaps = 25/615 (4%)
 Frame = -2

Query: 2059 DNLRFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQSTKPEASAF---------- 1910
            D+ RFG + + ++  +P P L  ++S  +REE   +++S Q  + + SA           
Sbjct: 204  DDSRFGGLSATLIAMDPFPSLGEIYSRVVREE--QRLASVQIREQQQSAIGFLTRQSEVT 261

Query: 1909 -------AVRNSKGKSVTCDHCGKTGHERNQCWELIGYPP---DRKPNSVKHMNRRKKPI 1760
                   ++  S+ +SV C HCG++GHE+  CW+++G+P    +R     +  + R +  
Sbjct: 262  ADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRG- 320

Query: 1759 YNGETGKANAVQVEDSVEQEEHGKAFNISKGMIPLKELAAEIYSMIKEQKTQENVSGTAL 1580
                +G  N+ +    V    H    N+S    P  E   +   +I +    +N   +  
Sbjct: 321  -GRSSGSNNSGRGRGQVTAA-HATTSNLS----PFPEFTPDQLRVITQMIQNKNNGTSDK 374

Query: 1579 LASKLFW---VLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNEN 1409
            L+ K+     +LD+GASHHMT  L++L  +  +P    +   +G+       GT KL+E 
Sbjct: 375  LSGKMKLGDVILDTGASHHMTGQLSLLTNIVTIPS-CSVGFADGRKTFAISMGTFKLSET 433

Query: 1408 LTLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYL 1229
            ++L+ VLY P+  C+LISV  L + + CL  ++   C +QD  +R LIG+GE RDGVYYL
Sbjct: 434  VSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVYYL 493

Query: 1228 KGVTDKGIVAVARRTDGIIWHLRLGHPSEGSLASLP-FPTKLCFPTGYFQNCDICHRAKQ 1052
                   +  V   TD  +WH RLGHPS   L+SLP F    C  +   ++CD+C RAKQ
Sbjct: 494  TDAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSS--RSCDVCFRAKQ 551

Query: 1051 TRQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDT 872
            TR+ FP S NK+   F+LIHCD+WG Y+ P+  G  YFL I+DD+SR+VW YLL  KS+ 
Sbjct: 552  TREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEV 611

Query: 871  SQLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVER 692
              ++  F A  + Q+   ++  RSDNG EFMCLS YF + GI+H+T+C  TPQQNGRVER
Sbjct: 612  RSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQTSCVGTPQQNGRVER 671

Query: 691  KNRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDH 512
            K+RH+LNV+RAL F+A+LP+KFWG+ V+TAAY+INRTP+ +  G +PYE L    P YD 
Sbjct: 672  KHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDYDQ 731

Query: 511  MKVFGCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLED 332
            ++VFG  CYA+ +   KDKF  RS  CIF+GYP GQKGWK+Y+L T++ ++SRDV+F E+
Sbjct: 732  LRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFREN 791

Query: 331  VKPFLSRT-DTSPSP 290
            V P+ +   DT  +P
Sbjct: 792  VFPYATNEGDTIYTP 806


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  472 bits (1214), Expect = e-130
 Identities = 252/614 (41%), Positives = 365/614 (59%), Gaps = 24/614 (3%)
 Frame = -2

Query: 2059 DNLRFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQSTKPEASAF---------- 1910
            D+ RFG + + ++  +P P L  ++S  +REE   +++S Q  + + SA           
Sbjct: 204  DDSRFGGLSATLIAMDPFPSLGEIYSRVVREE--QRLASVQIREQQQSAIGFLTRQSEVT 261

Query: 1909 -------AVRNSKGKSVTCDHCGKTGHERNQCWELIGYPP---DRKPNSVKHMNRRKKPI 1760
                   ++  S+ +SV C HCG++GHE+  CW+++G+P    +R     +  + R +  
Sbjct: 262  ADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRG- 320

Query: 1759 YNGETGKANAVQVEDSVEQEEHGKAFNISKGMIPLKELAAEIYSMI--KEQKTQENVSGT 1586
                +G  N+ +    V    H    N+S       +    I  MI  K   T + +SG 
Sbjct: 321  -GRSSGSNNSGRGRGQVTAA-HATTSNLSSFPEFTPDQLRVITQMIQNKNNGTSDKLSGK 378

Query: 1585 ALLASKLFWVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNENL 1406
              L      +LD+GASHHMT  L++L  +  +P    +   + +       GT KL+E +
Sbjct: 379  MKLGDV---ILDTGASHHMTGQLSLLTNIVTIPS-CSVGFADDRKTFAISMGTFKLSETV 434

Query: 1405 TLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLK 1226
            +L+ VLY P+  C+LISV  L + + CL  ++   C +QD  +R LIG+GE RDGVYYL 
Sbjct: 435  SLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVYYLT 494

Query: 1225 GVTDKGIVAVARRTDGIIWHLRLGHPSEGSLASLP-FPTKLCFPTGYFQNCDICHRAKQT 1049
                  +  V   TD  +WH RLGHPS   L+SLP F    C  +   ++CD+C RAKQT
Sbjct: 495  DAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSS--RSCDVCFRAKQT 552

Query: 1048 RQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTS 869
            R+ FP S NK+   F+LIHCD+WG Y+ P+  G  YFL I+DD+SR+VW YLL  KS+  
Sbjct: 553  REVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVR 612

Query: 868  QLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERK 689
             ++  F A  + Q+   ++  RSDNG EFMCLS YF + GI+H+T+C  TPQQNGRVERK
Sbjct: 613  SVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQTSCVGTPQQNGRVERK 672

Query: 688  NRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHM 509
            +RH+LNV+RAL F+A+LP+KFWG+ V+TAAY+INRTP+ +  G +PYE L    P YD +
Sbjct: 673  HRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGLSPYELLHGCKPDYDQL 732

Query: 508  KVFGCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDV 329
            +VFG  CYA+ +   KDKF  RS  CIF+GYP GQKGWK+Y+L T++ ++SRDV+F E+V
Sbjct: 733  RVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDVVFRENV 792

Query: 328  KPFLSRT-DTSPSP 290
             P+ +   DT  +P
Sbjct: 793  FPYATNEGDTIYTP 806


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  455 bits (1170), Expect = e-125
 Identities = 252/598 (42%), Positives = 360/598 (60%), Gaps = 18/598 (3%)
 Frame = -2

Query: 2059 DNLRFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQSTKPEASAFAVRNSK---- 1892
            D+  FGT+RS IL  +PLP L  +++   +EE H  ++   + + E + FA    K    
Sbjct: 82   DDTTFGTVRSSILALDPLPTLGKIYAMVTQEERHRSMARG-ADRAEITVFAAXTEKPGGQ 140

Query: 1891 -GKSVTCDHCGKTGHERNQCWELIGYP---PDRKPNSVKHMNRRKKPIYNGETGKANAVQ 1724
              KS +C HCGKTGH+   C++L GYP   P R+    +   R +   Y G    +  V 
Sbjct: 141  TNKSGSCTHCGKTGHDVADCFQLKGYPDWWPTRQMGRGRGRGRGRNS-YAGRGATSGRVH 199

Query: 1723 VEDSVEQ---EEHGKAF--NISKGMIP--LKELAAEIYSMIKEQKTQ-ENVSGTALLASK 1568
              ++V +   +E G+    ++ + +IP    +   ++ ++++   +  E ++G   +  +
Sbjct: 200  YXNAVAEADTQEKGQCVGHDVERNIIPGLNDDNFQKLMALLRNGSSNAEKLTGKNKIVEE 259

Query: 1567 LFWVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTLNRVL 1388
              W+LDSGAS HMT    +   L    +   + LP+G   V  + G VKL+++L L  VL
Sbjct: 260  --WILDSGASMHMTGRRDLFDWLRKW-ETACVGLPDGTKTVANEMGYVKLSKDLCLKNVL 316

Query: 1387 YEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKGVTDKG 1208
            Y PS +CNLIS+  L ++ + +VT++ + C IQD T+R  IG G+LR+GVYY K +  + 
Sbjct: 317  YVPSLKCNLISIGQLLKEKDYIVTFTDSFCVIQDRTSRNPIGVGKLRNGVYYYKPLQGEK 376

Query: 1207 IVAVARRTDGIIWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHRAKQTRQPFPLS 1028
            + AV       +WH RLGHPS+  LAS+               CD C R KQ R  F LS
Sbjct: 377  VNAVKVEEKYELWHRRLGHPSDRVLASIHSLGNNVMKGIEDYVCDSCCRGKQVRNSFQLS 436

Query: 1027 LNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLIKQFH 848
              +A + F LIH D+WG Y+TPT +G HYFL I+DD+SR VWIYL+KEKS+T  +++ F 
Sbjct: 437  NKRAFEIFNLIHVDIWGPYRTPTTSGAHYFLTIVDDHSRGVWIYLMKEKSETKDILQNFC 496

Query: 847  AMVKTQYNAKIQRFRSDNGGEFMC--LSEYFLDNGIIHETTCPYTPQQNGRVERKNRHLL 674
             M KTQ++  ++  RSDNG EF    +  ++   GI+ E++   TPQ NGRVERK++H+L
Sbjct: 497  FMTKTQFDKPVKCIRSDNGLEFCXGQMMSFYKREGILRESSLVNTPQXNGRVERKHQHIL 556

Query: 673  NVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVFGC 494
            N+AR LRF+A LP+ FWG+CVLTAAY+INRTPT +L GKTPYE L    P+Y+H++VFG 
Sbjct: 557  NIARTLRFQACLPIDFWGECVLTAAYLINRTPTPILDGKTPYEILFGEKPNYEHLRVFGS 616

Query: 493  LCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPF 320
            LCYA+      DKFD RS RC F GYP G+KGWKL +LET +   SRDVIF E + PF
Sbjct: 617  LCYAHKKSRSNDKFDXRSRRCXFXGYPYGKKGWKLXDLETKEQFESRDVIFHETIFPF 674


>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score =  448 bits (1153), Expect = e-123
 Identities = 247/624 (39%), Positives = 363/624 (58%), Gaps = 25/624 (4%)
 Frame = -2

Query: 2059 DNLRFGTMRSQIL---NQEPLPGLDNVFSAALREEGHHQVSSDQSTKPEASAFAVRNSKG 1889
            D  +FGT R+ IL   +++    LD+++S  + EE H  ++  +  + +A  FAV+    
Sbjct: 202  DAAKFGTSRTNILGRLSRDDNISLDSIYSEIIAEERHLTITRSKEERVDAVGFAVQTGVN 261

Query: 1888 K--SVT-------CDHCGKTGHERNQCWELIGYPP-----DRKPNSVKHMNRRKKPIYNG 1751
               SVT       C HCG++ H  + C++L G P          +S +   R   P   G
Sbjct: 262  AIASVTRVNNMGPCTHCGRSNHSADTCFKLHGVPEWYTEKYGDTSSGRGRGRSSTPRGRG 321

Query: 1750 ETGKANAVQVEDSVEQEEHGKAFNISKGMIPLKELAAEIYSMIKEQKTQENVSGTALLAS 1571
              G  N+ +  ++        A   S     +  ++ E +S I+    Q+  + +  L+ 
Sbjct: 322  R-GHGNSYKANNAQTSHPSSSASEFSD----IPGVSKEAWSAIRNLLKQDTATSSEKLSG 376

Query: 1570 K---LFWVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTL 1400
            K   + +++DSGASHHMT  L +L  ++++P  + + LPN K  +  + GT+ L  N+ L
Sbjct: 377  KTNCVDFLIDSGASHHMTGFLDLLTEIYEIPHSV-VVLPNAKHTIATKKGTLILGANMKL 435

Query: 1399 NRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKG- 1223
              VL+ P   C LISV  L R+L+C   ++   C IQD T++ LIG G   +GVY+L+  
Sbjct: 436  THVLFVPDLSCTLISVARLLRELHCFAIFTDKVCVIQDRTSKMLIGVGTESNGVYHLQRA 495

Query: 1222 -VTDKGIVAVARRTDGIIWHLRLGHPSEGSLASLPFPTKLCFPT---GYFQNCDICHRAK 1055
             V       V  +T+  +WH+RLGHPS   L+S+  P+   F +        CD+C RAK
Sbjct: 496  EVVATSANVVKWKTNKALWHMRLGHPSSKVLSSV-LPSLEDFDSCSSDLKTICDVCVRAK 554

Query: 1054 QTRQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSD 875
            QTR  F  S NKA + F+ IH D+WG Y+  +  G HYFL I+DD+SRAVWI+L+  KS+
Sbjct: 555  QTRASFSESFNKAEECFSFIHYDVWGPYKHASSCGAHYFLTIVDDHSRAVWIHLMLAKSE 614

Query: 874  TSQLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVE 695
             + L++QF AM   Q+N +++  RS+NG EFM L  YF + GI+H+ +C YT QQNGRVE
Sbjct: 615  VASLLQQFIAMASRQFNKQVKTVRSNNGTEFMSLKSYFAERGIVHQISCVYTHQQNGRVE 674

Query: 694  RKNRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYD 515
            RK+RH+LNVAR+L F+A LP+ FW + VLTAAY+INRTPT +L GKTPY+ L    PSY 
Sbjct: 675  RKHRHILNVARSLLFQAELPISFWEESVLTAAYLINRTPTPILDGKTPYKILYSQPPSYA 734

Query: 514  HMKVFGCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLE 335
             ++VFG LC+A    G  DKF  R  +CIF+GYP GQKGW++Y++E+    +SRDV+F E
Sbjct: 735  SLRVFGSLCFARKHTGRLDKFQERGRKCIFVGYPHGQKGWRIYDIESQIFFVSRDVVFQE 794

Query: 334  DVKPFLSRTDTSPSPSHLPVLQSP 263
            D+ PF  + +     S   V+ SP
Sbjct: 795  DIFPFADKKNKDTFSSPAAVIPSP 818


>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score =  444 bits (1142), Expect = e-122
 Identities = 253/623 (40%), Positives = 349/623 (56%), Gaps = 32/623 (5%)
 Frame = -2

Query: 2050 RFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSS-DQSTKPEASAFAV---------- 1904
            RF  +RS I  Q+PLP L+ V+S  + EE +   S      K EA  F V          
Sbjct: 187  RFRPIRSTITVQDPLPALNQVYSRVIHEEQNLNASRIKDDIKTEAVGFTVQATPLPPTPQ 246

Query: 1903 -------RNSKGKSVTCDHCGKTGHERNQCWELIGYPPDRKPNSVKHMNRRKKPIYNGET 1745
                   R     S+TC H  + GH+  +C+ + GYP      +  + +  +     G  
Sbjct: 247  VAAVSAPRFRDRSSLTCTHYHRQGHDITECFLVHGYPDWWLEQNGSNGSAGRGTSGRGNN 306

Query: 1744 GKANAVQVEDSVEQEEHGKAFNISKGMIP----LKELAAEIYSMIKEQKTQENVSGTALL 1577
            G+ N  +   S      GK    +    P        A +I  +I   + Q   + +  L
Sbjct: 307  GRGNNNRGGRSSSSGSRGKGRANAASTHPPPTSTPSNADQINQLISLLQAQNPATSSQKL 366

Query: 1576 ASKLFW---VLDSGASHHMTSHLAILHALHDL-PQPIRISLPNGKTVVVRQAGTVKLNEN 1409
            + K F    ++D+GASHHMT  + +L  + D+ P P+  + P+G      + GT+ L+  
Sbjct: 367  SGKTFTTYVIIDTGASHHMTGDITLLTNVEDIIPSPV--TKPDGTASRATKRGTLALHNA 424

Query: 1408 LTLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYL 1229
              L  VL+ P F C LISV  L +   C+  ++   C +QD  TR LIG+GE R+GVYY 
Sbjct: 425  YVLPDVLFVPDFNCTLISVAKLLKHTGCVAIFTDTLCFLQDRFTRTLIGAGEEREGVYYF 484

Query: 1228 KGV----TDKGIVAVARRTDGIIWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHR 1061
             GV     +KG    +  T   +WH RLGHPS G L S P            ++CDIC+R
Sbjct: 485  TGVLAARVNKGFKESSSAT---LWHHRLGHPSTGVLLSFPEFASSSSDLEIIKSCDICYR 541

Query: 1060 AKQTRQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEK 881
            AKQ R+ F  SLNK    F LIHCD+WG Y+TP   G  YFL I+DD+SR+VW +L+ EK
Sbjct: 542  AKQAREVFSPSLNKTTVCFELIHCDVWGPYRTPASCGSVYFLTIVDDFSRSVWTFLMAEK 601

Query: 880  SDTSQLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGR 701
            S+ S+LI+ F AM + Q+   I+   SDNG EFMCL  +F + GIIH+T+C  T QQNGR
Sbjct: 602  SEVSRLIRNFCAMSERQFCKSIKTVHSDNGTEFMCLKSFFQEQGIIHQTSCVDTRQQNGR 661

Query: 700  VERKNRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPS 521
            VERK+RH+LNVAR   F+++LP KF G+ +LTA ++INRTPTK+L GK+PYE L  + PS
Sbjct: 662  VERKHRHILNVARTCLFQSHLPRKFRGESILTAIHLINRTPTKILHGKSPYEVLFGSRPS 721

Query: 520  YDHMKVFGCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIF 341
            Y  ++ FGCLCYA+     KDKF  RS RC+F+GYP G+KGW+LY+LE +K  +SRDV+F
Sbjct: 722  YSALRTFGCLCYAHYRARDKDKFSERSRRCVFVGYPYGKKGWRLYDLEKNKFFVSRDVVF 781

Query: 340  LEDVKPF--LSRTDTSPSPSHLP 278
             E V P+  +  +    SPS  P
Sbjct: 782  QETVFPYGTIESSSIPFSPSMFP 804


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  440 bits (1131), Expect = e-120
 Identities = 247/617 (40%), Positives = 344/617 (55%), Gaps = 40/617 (6%)
 Frame = -2

Query: 2050 RFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQSTKPEASAFAVRNSKGKSVT-- 1877
            +F T+RS + ++ PLPGL+ V++   +EE      S    + + +AFAV+      V   
Sbjct: 201  KFHTIRSSLTSRVPLPGLEEVYNIVRQEEDMVNNRSSNEERTDVTAFAVQMRPRSEVISE 260

Query: 1876 -------------CDHCGKTGHERNQCWELIGYP------PDRKPNSVKHMNR---RKKP 1763
                         C HC + GH    C+ LIGYP      P  K NS    +R   R  P
Sbjct: 261  KFANSEKLQNKKLCTHCNRGGHSPENCFVLIGYPEWWGDRPRGKSNSNGSTSRGRGRFGP 320

Query: 1762 IYNGETGKANAVQV----------------EDSVEQEEHGKAFNISKGMIPLKELAAEIY 1631
             +NG   +   V V                 DS      G      +G++ L        
Sbjct: 321  GFNGGQPRPTYVNVVMTGPFPSSEHVNRVITDSDRDAVSGLTDEQWRGVVKLLNAGRSD- 379

Query: 1630 SMIKEQKTQENVSGTALLASKLFWVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKT 1451
                +    E  SGT  L +   W+LD+GASHHMT +L +L  +  +  P+ I L +G  
Sbjct: 380  ---NKSNAHETQSGTCSLFTS--WILDTGASHHMTGNLELLSDMRSM-SPVLIILADGNK 433

Query: 1450 VVVRQAGTVKLNENLTLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRK 1271
             V    GTV+L  +L L  V Y    E +LISV  +  + +C+           D TTR 
Sbjct: 434  RVAVSEGTVRLGSHLILKSVFYVKELESDLISVGQMMDENHCV-----------DRTTRM 482

Query: 1270 LIGSGELRDGVYYLKGVTDKGIVAVARRTDGIIWHLRLGHPSEGSLASLPFPTKLCFPTG 1091
            +   G+  +G +  +G+ +   V  + +    +WH RLGH S+  +  LP          
Sbjct: 483  VTRIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKEI 542

Query: 1090 YFQNCDICHRAKQTRQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSR 911
                CD C RAKQTR  FPLS N++   F LIHCD+WG Y+ P+ +G  YFL I+DDYSR
Sbjct: 543  LENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYFLTIVDDYSR 602

Query: 910  AVWIYLLKEKSDTSQLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETT 731
             VW+YL+ +KS+T + +K F A+V+ Q++ +I+  RSDNG EF+C+ EYFL  GI HET+
Sbjct: 603  GVWVYLMTDKSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYFLHKGIAHETS 662

Query: 730  CPYTPQQNGRVERKNRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTP 551
            C  TP QNGRVERK+RH+LN+ARALRF++ LP++FWG+C+L+AAY+INRTP+ LLQGK+P
Sbjct: 663  CVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSP 722

Query: 550  YEALLKTTPSYDHMKVFGCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETH 371
            YE L KT P Y H++VFG LCYA+  +   DKF +RS RC+F+GYP GQKGW+L++LE  
Sbjct: 723  YEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQ 782

Query: 370  KVLISRDVIFLEDVKPF 320
            K  +SRDVIF E   P+
Sbjct: 783  KFFVSRDVIFQETEFPY 799


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  439 bits (1129), Expect = e-120
 Identities = 248/616 (40%), Positives = 353/616 (57%), Gaps = 11/616 (1%)
 Frame = -2

Query: 2059 DNLRFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSS--DQSTKPEASAFAVRNSKGK 1886
            D   +G ++S +L++ PLP L+  ++   ++E    +S   D+    +    A  +S+ +
Sbjct: 191  DESMYGAVKSALLSRVPLPSLEEAYNTLTQDEESKSLSRLHDERNDEKMRRNATSSSRNQ 250

Query: 1885 SVTCDHCGKTGHERNQCWELIGYPPDRKPNSVKHMNRRKKPIYNGETGKANAVQVEDSVE 1706
            S +       G          G     +  S  H+      I    T   +++      E
Sbjct: 251  SASMGR----GSSVVPATSFKGKQSFGRGASANHVAN----IGESTTAATSSMSGSQLTE 302

Query: 1705 QEEHGKAFNISKGMIPLKELAAEIYSMIKEQKTQENVSGTALLASKLF---WVLDSGASH 1535
             +  G           +  L  E +  +++   + N + T   +SK F   W++DSGA++
Sbjct: 303  ADRVG-----------ISGLNDEQWKQLRQMLKERNFNSTNTKSSKFFLESWIIDSGATN 351

Query: 1534 HMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTLNRVLYEPSFECNLIS 1355
            HMT  L  L  + D+P PI I LP+G+     + G V L  +L L  V +     C+LIS
Sbjct: 352  HMTGTLEFLRDVCDMP-PIMIKLPDGRLTTSTKHGRVYLGSSLDLQEVFFVDGLHCHLIS 410

Query: 1354 VHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKGVTDKGIVAVARRTDGI 1175
            V  LTR  +C+   +   C IQD  T  LIG+G+ ++G+Y+ +G      VA   R D  
Sbjct: 411  VSQLTRAKSCVFQITDKVCIIQDRITLTLIGAGKQQNGLYFFRGTET---VASMTRMDSS 467

Query: 1174 --IWHLRLGHPSEGSLASLPFPTKLCFPTGYF---QNCDICHRAKQTRQPFPLSLNKANK 1010
              +WH RLGHPS   L  L F       TG+    + C+IC +AKQTR PFPLS NK + 
Sbjct: 468  SQLWHCRLGHPSSKVLKLLSFSDS----TGHAFDSKTCEICIKAKQTRDPFPLSNNKTSS 523

Query: 1009 PFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLIKQFHAMVKTQ 830
            PF ++HCDLWG Y+T ++ G +YFL ++D+Y+RAVW+YLL  K      +K F ++V+ Q
Sbjct: 524  PFEMVHCDLWGPYRTTSICGSNYFLTLVDNYTRAVWLYLLPSKQTAPMHLKNFISLVERQ 583

Query: 829  YNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERKNRHLLNVARALRF 650
            ++ KI+  RSDNG EF+CLS +F+D+GIIHET+C  TPQQNGRVERK+RH+LNVARALRF
Sbjct: 584  FSTKIKTIRSDNGTEFVCLSSFFVDHGIIHETSCVGTPQQNGRVERKHRHILNVARALRF 643

Query: 649  EANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVFGCLCYA-NVI 473
            +A LP++FW  C LTAAY+INRTPT LLQGKTP+E L    P  +H++VFGC+CY  N  
Sbjct: 644  QARLPIEFWSYCALTAAYLINRTPTPLLQGKTPFELLYNRPPPVNHIRVFGCICYVHNQK 703

Query: 472  HGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPFLSRTDTSPS 293
            HG  DKF+SRS + IF+GYP  +KGW++YN ET  + +SRDV+F E   PF +    S  
Sbjct: 704  HG-GDKFESRSNKSIFLGYPFAKKGWRVYNFETGVISVSRDVVFRETEFPFPASVFDSTP 762

Query: 292  PSHLPVLQSPCGADES 245
             S L    SP  AD+S
Sbjct: 763  DSQL----SPSNADQS 774


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score =  437 bits (1125), Expect = e-120
 Identities = 248/611 (40%), Positives = 355/611 (58%), Gaps = 35/611 (5%)
 Frame = -2

Query: 2047 FGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQSTKP-EASAFAVRNSKGKS---- 1883
            +  +R+ IL+Q+PLP LD  +   ++++      +    KP E   FAVR   G+     
Sbjct: 202  YAQLRTNILSQDPLPSLDRAYQLVIQDKRVRLAKAVTEDKPAEVLGFAVRTGAGRGRGKT 261

Query: 1882 ---------------------VTCDHCGKTGHERNQCWELIGYP----PDRKPNSVKHMN 1778
                                 V C HC K GH++N C+E++GYP       K +     +
Sbjct: 262  ERPVCSHCKKTGHETSTCWSLVACPHCHKHGHDKNNCYEIVGYPEGWLDQNKADGGAGRS 321

Query: 1777 RRKKPIYNGETGKANAVQ--VEDSVEQEEHGKAFNISKGMIPLKELAAEIYSMIKEQKTQ 1604
            R++     G + +ANA    +  S  +    + F   +     K LA  I +    Q   
Sbjct: 322  RQQAGRGRG-SARANAASSTIGASSTKSSTDQLFTPEQ----WKALAGLIGN---AQVPN 373

Query: 1603 ENVSGTALLASKLFWVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTV 1424
            + ++G     S   W++D+GA+HH+T  L+ L     L + + + LPNG++VV  Q+G+V
Sbjct: 374  DRLNGKFDTKS---WIIDTGATHHVTGDLSWLFDTIALFECL-VGLPNGESVVATQSGSV 429

Query: 1423 KLNENLTLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRD 1244
            +L+ N+TL  VLY     CNL+SV  LT DL+C+V ++   C+IQD  TR+LIG+G  RD
Sbjct: 430  RLSNNITLKNVLYVSKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQD-HTRELIGTGVRRD 488

Query: 1243 GVYYLKGVTDKGI--VAVARRTDGI-IWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCD 1073
            G+YY  G     +  V+V      + +WH R+GHPSE  +  LP  + L       + C+
Sbjct: 489  GLYYFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNL--KGSLNKACE 546

Query: 1072 ICHRAKQTRQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYL 893
            IC RAK  R  FPL+ NKA + F  IHCDLWG Y+  +     YFL I+DD+SRAVWIYL
Sbjct: 547  ICFRAKHPRDKFPLTDNKATRIFEKIHCDLWGSYKHVSSCAARYFLTIIDDFSRAVWIYL 606

Query: 892  LKEKSDTSQLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQ 713
            L  K++  ++   F AMV  Q++  ++  +SDNG EF CL +YF   GI+ +T+C  TPQ
Sbjct: 607  LVNKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYFSATGILFQTSCVGTPQ 666

Query: 712  QNGRVERKNRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLK 533
            QNGRVERK++H+LNV RAL F+ANLP+ FWG+ VL AA++INRTP+ LL  KTP+E L  
Sbjct: 667  QNGRVERKHKHILNVGRALHFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFG 726

Query: 532  TTPSYDHMKVFGCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISR 353
            T PSY  +  FGCL +A+      DKF SRS +C+F+GYP G+KGWKL++L+T ++ +SR
Sbjct: 727  TPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSR 786

Query: 352  DVIFLEDVKPF 320
            DV F EDV PF
Sbjct: 787  DVKFFEDVFPF 797


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  426 bits (1094), Expect = e-116
 Identities = 237/598 (39%), Positives = 348/598 (58%), Gaps = 18/598 (3%)
 Frame = -2

Query: 2059 DNLRFGTMRSQILNQEPLPGLDNVFSAALREE----GHHQVSSDQSTKPEASAFAVR--- 1901
            D+  F T+RS ++++ P+  L+ V++   +EE        V  DQ    E +AFA +   
Sbjct: 105  DDALFRTVRSSLVSRIPVQPLEEVYNIVRQEEDLLRNGANVLDDQR---EVNAFAAQMRP 161

Query: 1900 -------NSKGKSVTCDHCGKTGHERNQCWELIGYPP--DRKPNSVKHMNRRKKPIYNGE 1748
                   + K KS+ C HC ++GH    C+ +IGYP     +P S + +  R +   N  
Sbjct: 162  KLYQGRGDEKDKSMVCKHCNRSGHASESCYAVIGYPEWWGDRPRS-RSLQTRGRGGTNSS 220

Query: 1747 TGKANAVQVEDSVEQEEHGKAFNISKGMIPLKELAAEI-YSMIKEQKTQENVSG-TALLA 1574
             G+               G A   ++  +P  +   +  Y++  E +  + V+G T    
Sbjct: 221  GGRGR-------------GAAAYANRVTVPNHDTYEQANYALTDEDR--DGVNGLTDSQW 265

Query: 1573 SKLFWVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTLNR 1394
              +  +L+SG         A    L D+  PI I L +G+  +  + GTV+L  NL +  
Sbjct: 266  RTIKSILNSGKD-------AATEKLTDM-DPILIVLADGRERISVKEGTVRLGSNLVMIS 317

Query: 1393 VLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKGVTD 1214
            V Y   F+ +LIS+  L  +  C++  S     +QD T+R ++G+G    G ++ +    
Sbjct: 318  VFYVEEFQSDLISIGQLMDENRCVLQMSDRFLVVQDRTSRMVMGAGRRVGGTFHFRSTEI 377

Query: 1213 KGIVAVARRTDGIIWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHRAKQTRQPFP 1034
               V V    +  +WH R+GHP+   ++ +P  +     T   + CD+CHRAKQTR  FP
Sbjct: 378  AASVTVKEEKNYELWHSRMGHPAARVVSLIPESSVSVSSTHLNKACDVCHRAKQTRNSFP 437

Query: 1033 LSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLIKQ 854
            LS+NK  + F LI+CDLWG Y+TP+ TG  YFL I+DDYSR VW+YLL +KS+    +K 
Sbjct: 438  LSINKTLRIFELIYCDLWGPYRTPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKN 497

Query: 853  FHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERKNRHLL 674
            F AM   Q+N KI+  RSDNG EF+CL+++F + G+IHE +C  TP++N RVERK+RHLL
Sbjct: 498  FFAMTDRQFNVKIKTVRSDNGTEFLCLTKFFQEQGVIHERSCVATPERNDRVERKHRHLL 557

Query: 673  NVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVFGC 494
            NVARALRF+ANLP++FWG+CVLTAAY+INRTP+ +L   TPYE L K  P +DH++VFG 
Sbjct: 558  NVARALRFQANLPIQFWGECVLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVFGS 617

Query: 493  LCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPF 320
            LCYA+  +   DKF  RS RC+F+GYP GQKGW+L++LE ++  +SRDV+F E   PF
Sbjct: 618  LCYAHNRNRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSRDVVFSELEFPF 675


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  424 bits (1091), Expect = e-116
 Identities = 243/608 (39%), Positives = 347/608 (57%), Gaps = 29/608 (4%)
 Frame = -2

Query: 2056 NLRFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQSTKPEASAFAVRNSKGKS-- 1883
            N  +  +R QIL   PLP    V+S  L++E   +VS +   K   +  A R++K  S  
Sbjct: 228  NDSYAAIRGQILLMHPLPDTRRVYSLVLQQEKQVEVSLNNGNKNHYAMLADRDNKATSAH 287

Query: 1882 --------VTCDHCGKTGHERNQCWELIGYPPDRKPNSVKHMNRRKKPIYNGETGKANAV 1727
                    + C +C +  H   +C+ L G+P   K     H    K P  N     AN V
Sbjct: 288  QVQKQKTPLHCSYCDRDYHSIEKCYYLHGFPIGHK----LHGKNVKPP--NQRHSNANNV 341

Query: 1726 QVEDSVEQEEHGKAFNISKGMIPLKELAAEIYSMIKEQKTQE-----NVSGTALLASKLF 1562
            +VE +   E   K    + G     E   ++ +MI++          N +G  + +SK+ 
Sbjct: 342  KVETNKAVETEAKLLPTNDGPRLTTEEYNQLMAMIRKNNGGNSQHFANATGINMSSSKII 401

Query: 1561 ---------WVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNEN 1409
                     W++DSGA+ H+TS   +L    +LP+   ISLPNG    +   G++ +  +
Sbjct: 402  PNCPHSNMCWIIDSGATDHVTSSAELLDP-KNLPKTTTISLPNGGQAHIESIGSLHVTPH 460

Query: 1408 LTLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYL 1229
            + L+ VL  P F+ NL+SV  LTR L C+V +  + C +QD TTRK IG G+  +G+YYL
Sbjct: 461  IKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNGLYYL 520

Query: 1228 KGVTDKGIV-AVARRTDGIIWHLRLGHPSEGSLASLPFPTKLCFPTGYFQN---CDICHR 1061
                +  +  A+ + +D  +WH RLGHPS G L  L        P  YF +   CDIC  
Sbjct: 521  AQDQNPALAYAIHKHSD--LWHQRLGHPSSGPLQVLAKVN----PKIYFDSKHVCDICPL 574

Query: 1060 AKQTRQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEK 881
            AKQTR  FP S   ++ PF LIHCD+WG ++  + +G  YFL I+DD++R  WI+L+  K
Sbjct: 575  AKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYTWIHLMSFK 634

Query: 880  SDTSQLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGR 701
            S+T  +++ F + V+TQ+N  I+  R+DNG E   + +Y    GI +  +C YTPQQNG 
Sbjct: 635  SETQGILQSFISWVETQFNRCIKTLRTDNGTEISSMKQYLDTKGINYHHSCAYTPQQNGV 694

Query: 700  VERKNRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPS 521
            VERK+RHLLNV RALRF+ANLPLKFWG+ + TA Y+INR PT LL  K+PY+ L    PS
Sbjct: 695  VERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSPYQLLXNKLPS 754

Query: 520  YDHMKVFGCLCYA-NVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVI 344
            Y H++ FGCLCYA N++  H  KFD R+ RCIF+GYP+GQKG+++Y+L T+K   S DV+
Sbjct: 755  YHHLRTFGCLCYATNLLPTH--KFDQRARRCIFVGYPLGQKGYRVYDLXTNKFFSSXDVV 812

Query: 343  FLEDVKPF 320
            F E + PF
Sbjct: 813  FHEHIFPF 820


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  419 bits (1078), Expect = e-114
 Identities = 258/681 (37%), Positives = 367/681 (53%), Gaps = 63/681 (9%)
 Frame = -2

Query: 2056 NLRFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQSTKPEAS--AFAVRNSKGKS 1883
            N  +  +R QIL   PLP +   +S+  +EE    +S+  +T    S  A AVR+++ K+
Sbjct: 207  NESYSAIRGQILLMNPLPSIRQAYSSVCQEEKQRLLSATHTTAESNSSAAMAVRSNQMKN 266

Query: 1882 VT-------------------------------------CDHCGKTGHERNQCWELIGYP 1814
             +                                     C +CG+ GH   +C++L GYP
Sbjct: 267  NSAGNARSDRSDRFYNSSQDSRRFDQDKRRSGSSKGRPQCTYCGEMGHFVEKCYQLHGYP 326

Query: 1813 PDR-KPNSVKHMNRRKKPIYNGETGKANAVQVEDSVEQEEHGKAFNISKGMIPLKELAAE 1637
            P   K  +  + NR K            A QV D   ++  GK+         L++L   
Sbjct: 327  PGHPKARTGSNFNRHKNTFV--------ANQVSDGANKDG-GKSVLTGITEAQLQQLL-- 375

Query: 1636 IYSMIKEQKTQENVSGTALLASK-LF------WVLDSGASHHMTSHLAI-LHALHDLPQP 1481
              S++ ++    +   TA++A   LF      W++D+ A+ H++S   + LH   ++  P
Sbjct: 376  --SLLNDKDGGTSSQATAVVAKPGLFKISSHRWIIDNSATDHISSSPKLFLHKDKNISLP 433

Query: 1480 IRISLPNGKTVVVRQAGTVKLNENLTLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNS 1301
            + + LP+G+   +   G++ LN    L  VL  P+F+ +L+SV  LTR LNC VT+  + 
Sbjct: 434  L-VLLPSGEKANIVAKGSLPLNSVYYLRDVLCVPTFKVDLMSVSRLTRGLNCSVTFFPHW 492

Query: 1300 CSIQDLTTRKLIGSGELRDGVYYLKGVTDKGIVA--------------VARRTDGIIWHL 1163
            C +QDL TR++IG G+ RDG+YYL  +T                        TD  +WH 
Sbjct: 493  CVLQDLATRRMIGLGKQRDGLYYLAALTTNKTETNSYSSPNRPPTCNLTTSSTD--LWHS 550

Query: 1162 RLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHRAKQTRQPFPLSLNKANKPFALIHCDL 983
            RLGH S   L+ +     L F   +  +C IC  AKQ R PF  S   + KPF LIHCD+
Sbjct: 551  RLGHVSHSRLSFIA-KNFLNFSIQFNNDCPICLLAKQHRLPFGTSEISSEKPFDLIHCDI 609

Query: 982  WGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLIKQFHAMVKTQYNAKIQRFR 803
            WGRY+  +L+G HYFL I+DDY+R  WI+L+K K +   LIK F + V TQ+ + I+ FR
Sbjct: 610  WGRYKHSSLSGAHYFLTIVDDYTRFTWIFLMKHKDEAQPLIKHFFSYVSTQFASHIKIFR 669

Query: 802  SDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERKNRHLLNVARALRFEANLPLKFW 623
            SDNGGEF+ L  +F DNG++ + +C YTPQQNG VERK+RH+L VARAL+F+A LP +FW
Sbjct: 670  SDNGGEFLSLQSFFKDNGVLFQHSCVYTPQQNGVVERKHRHILQVARALKFQAQLPTQFW 729

Query: 622  GDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVFGCLCYANVIHGHKDKFDSR 443
            G+C LTA +IINR P+ +L  KTP+E L    P+Y H++VFGCL YA  +H    KFD R
Sbjct: 730  GECALTAVHIINRLPSPVLSFKTPFERLYLKPPTYSHLRVFGCLAYATNVH-VSHKFDHR 788

Query: 442  SARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPFLSRTDTSPSPSHLPVLQSP 263
            +  CIFIGYP+GQK +KL+NL T K+  SRDV F E+  P+ S     P+ S+L     P
Sbjct: 789  AIACIFIGYPVGQKAYKLFNLSTRKIFTSRDVRFHENRFPYASFESVLPT-SNLGYSSGP 847

Query: 262  CGAD-ESPTQPHVFGQSSLSL 203
                   PT  HV   S L L
Sbjct: 848  IPVPIHDPTPSHVTNPSRLIL 868


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  418 bits (1074), Expect = e-114
 Identities = 241/623 (38%), Positives = 345/623 (55%), Gaps = 18/623 (2%)
 Frame = -2

Query: 2056 NLRFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQSTKPE-ASAFAVRNSKGKSV 1880
            N  +  +RS IL   PLP +   +S  ++EE   QVSS+ +     A+A   +    +  
Sbjct: 475  NESYKAVRSNILMMSPLPNVRQAYSLIVQEEMQRQVSSEPTENFSIAAAVPGKGGNPRQK 534

Query: 1879 TCDHCGKTGHERNQCWELI---------GYPPDR-----KPNSVKHMNRRKKPIYNGETG 1742
             CDHC ++GH  ++C  L          G+  DR       N+     R ++P   G   
Sbjct: 535  MCDHCNRSGHTIDECRTLKFHCKFCDKRGHTEDRCRLKNGSNNKTGQFRGQRPFGRGNQP 594

Query: 1741 KANAVQVEDSVEQEEHGKAFNISKGMIPLKELAAEIYSMIKEQKTQENVSGTALLASKLF 1562
             ANA + ++  +          +   I  ++LA  I ++        N+   A  A    
Sbjct: 595  SANATESQEMSDSTSSSTVQGFTTEQI--QQLAQAIRAL--NHSNSGNIDAYANAA---- 646

Query: 1561 WVLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTLNRVLYE 1382
                 GA+ H+ SH+++   L        ++LPNG    +   GTV  +  LTL  VL  
Sbjct: 647  -----GATDHIVSHMSLFTDLKP-SNVTTVNLPNGVASPITHTGTVIFDSQLTLKDVLCV 700

Query: 1381 PSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKGVTDKGIV 1202
            PSF  NLIS   L +D NC + +  + C +QDL + K+IGSG+ R G+YY+   T+K +V
Sbjct: 701  PSFNLNLISASKLAKDQNCYIIFFPDYCILQDLVSGKMIGSGKQRGGLYYMHPSTNKSVV 760

Query: 1201 A-VARRTDGIIWHLRLGHPSEG--SLASLPFPTKLCFPTGYFQNCDICHRAKQTRQPFPL 1031
              V++ +D  +WHLRLGHPS     L S   P           +C IC +AKQTR PFP 
Sbjct: 761  FHVSQPSD--LWHLRLGHPSFSRFKLLSRLLPD---IHKEIGNHCPICPQAKQTRLPFPK 815

Query: 1030 SLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLIKQF 851
            S      PF+L+HCD+WG ++ P  TG  YFL I+DD+SR  WI+L+  KS+T  L+  F
Sbjct: 816  SSITTKFPFSLLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWIFLMHHKSETQSLLTNF 875

Query: 850  HAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERKNRHLLN 671
               VKTQ++  +Q  R DNG EF+ L  +  + GI  +T+C YTPQQNG VERK+RH+LN
Sbjct: 876  VQFVKTQFHTDVQTVRMDNGTEFIPLRIFLQNKGIELQTSCIYTPQQNGVVERKHRHILN 935

Query: 670  VARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVFGCL 491
            VAR+L F++N+PL+FWG+CVLTA Y+INR PT LL  K+P+E L    PS  H++VFGC 
Sbjct: 936  VARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRPPSLTHLRVFGCE 995

Query: 490  CYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPFLSR 311
            CY   +H  K KFD R++ C+F+GYP G+KG+K+ +L+T K+ +SRDV F E++ PF S 
Sbjct: 996  CYVTNVH-PKQKFDPRASICVFLGYPHGKKGYKVLDLQTQKISVSRDVFFRENIFPFHSS 1054

Query: 310  TDTSPSPSHLPVLQSPCGADESP 242
            +  S   S    L  P   D +P
Sbjct: 1055 SSQSQQHSPSLPLPLPISFDSTP 1077


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  416 bits (1069), Expect = e-113
 Identities = 216/459 (47%), Positives = 295/459 (64%), Gaps = 6/459 (1%)
 Frame = -2

Query: 1561 WVLDSGASHHMTSHLAILH---ALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTLNRV 1391
            W++D+GA+HH+T  L+ L    AL + P    + LPNG++VV  Q+G+V+L+ N+TL  V
Sbjct: 138  WIIDTGATHHVTGDLSWLFDTIALFECP----VGLPNGESVVATQSGSVRLSNNITLQNV 193

Query: 1390 LYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKGVTDK 1211
            LY P   CNL+SV  LT DL+C+V ++   C+IQD  TR+LIG+G  RDG+YY  G    
Sbjct: 194  LYVPKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQD-HTRELIGTGVRRDGLYYFGGAEGD 252

Query: 1210 GI--VAVARRTDGI-IWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHRAKQTRQP 1040
             +  V+V      + +WH R+GHPSE  +  LP  + L       + C+IC RAK  R  
Sbjct: 253  SVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNL--KGSLNKACEICFRAKHXRDK 310

Query: 1039 FPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLI 860
            FPLS NKA + F  IHCDLWG Y+  +  G  YFL I+DD+SRAVWIYLL +K++  ++ 
Sbjct: 311  FPLSDNKATRIFEKIHCDLWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMF 370

Query: 859  KQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERKNRH 680
              F AMV  Q++  ++  +SDNG EF CL +YF   GI+ +T+C  TPQQNGRVERK++H
Sbjct: 371  MSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYFSATGILFQTSCVGTPQQNGRVERKHKH 430

Query: 679  LLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVF 500
            +LNV RALRF+ANLP+ FWG+ VL AA++INRTP+ LL  KTP+E L  T PSY  +  F
Sbjct: 431  ILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAAIHTF 490

Query: 499  GCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPF 320
            GCL +A+      DKF SRS +C+F+GYP G+KGWKL++L+T ++ +SRDV F EDV PF
Sbjct: 491  GCLSFAHDXKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPF 550

Query: 319  LSRTDTSPSPSHLPVLQSPCGADESPTQPHVFGQSSLSL 203
             +    +  P ++    S       P      G  SL L
Sbjct: 551  GNPGAVNIIPENIVPTASSAPLSPGPEVVPTVGLDSLGL 589


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  413 bits (1062), Expect = e-112
 Identities = 209/420 (49%), Positives = 284/420 (67%), Gaps = 6/420 (1%)
 Frame = -2

Query: 1561 WVLDSGASHHMTSHLAILH---ALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTLNRV 1391
            W++D+GA+HH+T  L+ L    AL + P    + LPNG++VV  Q+G+V+L+ N+TL  V
Sbjct: 52   WIIDTGATHHVTGDLSWLFDTIALFECP----VGLPNGESVVATQSGSVRLSNNITLQNV 107

Query: 1390 LYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKGVTDK 1211
            LY P   CNL+SV  LT DL+C+V ++   C+IQD  TR+LIG+G  RDG+YY  G    
Sbjct: 108  LYVPKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQD-HTRELIGTGVRRDGLYYFGGAEGD 166

Query: 1210 GI--VAVARRTDGI-IWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHRAKQTRQP 1040
             +  V+V      + +WH R+GHPSE  +  LP  + L       + C+IC RAK  R  
Sbjct: 167  SVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNL--KGSLNKACEICFRAKHPRDK 224

Query: 1039 FPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLI 860
            FPLS NKA + F  IHCDLWG Y+  +  G  YFL I+DD+SRAVWIYLL +K++  ++ 
Sbjct: 225  FPLSDNKATRIFEKIHCDLWGSYKHVSSCGARYFLTIVDDFSRAVWIYLLVDKTEVFRMF 284

Query: 859  KQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERKNRH 680
              F AMV  Q++  ++  +SDNG EF CL +YF   GI+ +T+C  TPQQNGRVERK++H
Sbjct: 285  MSFIAMVDRQFSQTVKVVQSDNGTEFKCLLDYFSATGILFQTSCVGTPQQNGRVERKHKH 344

Query: 679  LLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVF 500
            +LNV RALRF+ANLP+ FWG+ VL AA++INRTP+ LL  KTP+E L  T PSY  +  F
Sbjct: 345  ILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAAIHTF 404

Query: 499  GCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPF 320
            GCL +A+      DKF SRS +C+F+GYP G+KGWKL++L+T ++ +SRDV F EDV PF
Sbjct: 405  GCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPF 464


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score =  409 bits (1052), Expect = e-111
 Identities = 242/658 (36%), Positives = 358/658 (54%), Gaps = 50/658 (7%)
 Frame = -2

Query: 2056 NLRFGTMRSQILNQEPLPGLDNVFSAALREEGHHQVSSDQST---------KPEASAFAV 1904
            N  +  +R QIL   PLP +   +S+ ++E     + + + T         + E  A  V
Sbjct: 185  NESYNAIRGQILLMNPLPDVAKAYSSIVQEXKQRSLGAIRETTENSAMVVQRAEPMALXV 244

Query: 1903 RNSKG----------KSVTCDHCGKTGHERNQCWELIGYPPDRKPNSVKHMNRRKKPIYN 1754
            R  +G          KS+ C +C +  H R  CW+L GYPP+   ++    N        
Sbjct: 245  RXGQGSSSRSNPSNRKSLHCTYCDRDHHVRETCWKLNGYPPEHPKHASNRSNHGSTHFKR 304

Query: 1753 GETGKANAVQVEDSVEQEEHGKAFNISKGMIPLKELAAEIYSMIKEQKTQE------NVS 1592
              + +++A  V++    +E     +++ G+  L+    +I S+++ + T +      N +
Sbjct: 305  NNSHQSSANNVKERPVMQE---VPSMTNGLSDLQ--IQQILSIMQGKGTTQSTNPKANAA 359

Query: 1591 GTALLASKLFW---VLDSGASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVK 1421
             + LL + L     ++DSGA+ H+TS   +L           +++P+G+   +   G + 
Sbjct: 360  ASGLLQTLLHLHRLIIDSGATDHITSSPTLLVNSRKNTFLPPVAMPSGEQAPITSIGNLP 419

Query: 1420 LNENLTLNRVLYEPSFECNLISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDG 1241
            LN   TL  VL  PSF+ +L+SV  +T+DLNC VT+  + C +QDLTTR  IG GE RDG
Sbjct: 420  LNSAATLKNVLGVPSFKVDLMSVSRVTKDLNCSVTFFPHWCILQDLTTRTTIGLGEQRDG 479

Query: 1240 VYYLKGVTDK-------GIVAVARRTDG-------IIWHLRLGHPSEGSLASLPFPTK-- 1109
            +YYL  +  +          A + R+          +WH RLGH S    + L F  K  
Sbjct: 480  LYYLVALASEKPKTQTPSXXATSCRSPSSQVTSSTALWHXRLGHLSS---SRLDFMAKHL 536

Query: 1108 LCFPTGYFQNCDICHRAKQTRQPFPLSLNKANKPFALIHCDLWGRYQTPTLTGCHYFLCI 929
            L FP      CD+C  AKQ R PF +S   + +PF LIHCD WG Y+  +L+G   FL I
Sbjct: 537  LNFPFQSNNACDVCXLAKQRRLPFSVSSISSVRPFELIHCDXWGPYKIASLSGAKXFLTI 596

Query: 928  MDDYSRAVWIYLLKEKSDTSQLIKQFHAMVKTQYNAKIQRFRSDNGGEFMCLSEYFLDNG 749
            +DDYSR  W++ +  KS+T  L+ +F + V+TQ++  I   R DNGGEF  + E+F   G
Sbjct: 597  VDDYSRFTWVFFMHHKSETQHLLVKFFSFVQTQFHVSIANIRVDNGGEFFSMREFFKQKG 656

Query: 748  IIHETTCPYTPQQNGRVERKNRHLLNVARALRFEANLPLKFWGDCVLTAAYIINRTPTKL 569
              ++ +C YT QQNG VERK+RH+L   RA RF+A+LPL FW +CV TA +IINR PT L
Sbjct: 657  TTYQHSCVYTSQQNGVVERKHRHILESTRAFRFQAHLPLPFWAECVSTAVHIINRLPTPL 716

Query: 568  LQGKTPYEALLKTTPSYDHMKVFGCLCYANVIHGHKDKFDSRSARCIFIGYPMGQKGWKL 389
            L  +TP+E L    PSY H++VFGCL YA  +H    KF  R+ RCIF+GYP+GQK +KL
Sbjct: 717  LSRQTPFERLYGKLPSYSHIRVFGCLAYATNVH-VPHKFAPRAKRCIFLGYPVGQKAYKL 775

Query: 388  YNLETHKVLISRDVIFLEDVKPFLSRTDTSPSPSHLPVLQ------SPCGADESPTQP 233
            Y+L+TH++  SRDV+F E + P+   +  SPS +  PV+       SP     SP +P
Sbjct: 776  YDLDTHQMFTSRDVVFHETIFPY--ESIPSPSSNSDPVIPLSISDLSPPVPQPSPPEP 831


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  407 bits (1046), Expect = e-111
 Identities = 203/435 (46%), Positives = 281/435 (64%)
 Frame = -2

Query: 1543 ASHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTLNRVLYEPSFECN 1364
            ASHHMT +L +L  +  +  P+ I L +G   V    GTV+L  +L L  V Y    E +
Sbjct: 169  ASHHMTGNLELLSDMRSM-SPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKELESD 227

Query: 1363 LISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKGVTDKGIVAVARRT 1184
            LISV  +  + +C+V  + +   IQD TTR + G G+  +G +  +G+ +   V  + + 
Sbjct: 228  LISVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKA 287

Query: 1183 DGIIWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHRAKQTRQPFPLSLNKANKPF 1004
               +WH RLGH S+  +  LP              CD C RAKQTR  FPLS N++   F
Sbjct: 288  PFDLWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSF 347

Query: 1003 ALIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLIKQFHAMVKTQYN 824
             LIHCD+WG Y+TP+ +G  YFL I+DDYSR VW+YL+ +KS+T + +K F A+V+ Q++
Sbjct: 348  QLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFD 407

Query: 823  AKIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERKNRHLLNVARALRFEA 644
             +I+  RSDNG EF+C+ EYFL  GI HET+C  TP QNGRVERK+RH+LN+ARALRF++
Sbjct: 408  TEIKTVRSDNGTEFLCMREYFLHKGITHETSCVGTPHQNGRVERKHRHILNIARALRFQS 467

Query: 643  NLPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVFGCLCYANVIHGH 464
             LP++FWG+C+L+AAY+INRTP+ LLQGK+PYE L KT P+Y H++VFG LCYA+  +  
Sbjct: 468  YLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSHLRVFGSLCYAHNQNHK 527

Query: 463  KDKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPFLSRTDTSPSPSH 284
             DKF +RS RC+F+GYP GQKGW+L++LE  K  +SRDVIF E   P+   +    + SH
Sbjct: 528  GDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPYSKMSCNRFTSSH 587

Query: 283  LPVLQSPCGADESPT 239
               L +     E  T
Sbjct: 588  KAFLAAVTAGMEPTT 602


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  407 bits (1045), Expect = e-110
 Identities = 215/494 (43%), Positives = 305/494 (61%), Gaps = 6/494 (1%)
 Frame = -2

Query: 1702 EEHGKAFNISKGMIPLKELAAEIYSMIKEQKTQENVSGTALLASKLFWVLDSG------A 1541
            E+  K F++S G    K + A++ +  +E  T E   G     +K++  ++S       A
Sbjct: 114  EQIRKRFSVSNGPKNQK-MKADLATCKQEGMTVEGYYGKL---NKIWDNINSYRPLRICA 169

Query: 1540 SHHMTSHLAILHALHDLPQPIRISLPNGKTVVVRQAGTVKLNENLTLNRVLYEPSFECNL 1361
            SHHMT +L +L  +  +  P+ I L +G   V    GTV+L  +L L  V Y    E +L
Sbjct: 170  SHHMTGNLELLSGMRSM-SPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKELESDL 228

Query: 1360 ISVHCLTRDLNCLVTYSQNSCSIQDLTTRKLIGSGELRDGVYYLKGVTDKGIVAVARRTD 1181
            ISV  +  + +C+V  + +   IQD TTR + G G+  +G +  +G+ +   V  + +  
Sbjct: 229  ISVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAP 288

Query: 1180 GIIWHLRLGHPSEGSLASLPFPTKLCFPTGYFQNCDICHRAKQTRQPFPLSLNKANKPFA 1001
              +WH RLGH S+  +  LP              CD C RAKQTR  FPL  N++   F 
Sbjct: 289  FDLWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQ 348

Query: 1000 LIHCDLWGRYQTPTLTGCHYFLCIMDDYSRAVWIYLLKEKSDTSQLIKQFHAMVKTQYNA 821
            LIHCD+WG Y+TP+ +G  YFL I+DDYSR VW+YL+ +KS+T + +K F A+V+ Q++ 
Sbjct: 349  LIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQFDT 408

Query: 820  KIQRFRSDNGGEFMCLSEYFLDNGIIHETTCPYTPQQNGRVERKNRHLLNVARALRFEAN 641
            +I+  RSDNG EF+C+ EYFL  GI HET+C  TP QNGRVERK+RH+LN+ARALRF++ 
Sbjct: 409  EIKTVRSDNGTEFLCMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSY 468

Query: 640  LPLKFWGDCVLTAAYIINRTPTKLLQGKTPYEALLKTTPSYDHMKVFGCLCYANVIHGHK 461
            LP++FWG+C+L+AAY+INRTP+ LLQGK+PYE L KT P Y H++VFG LCYA+  +   
Sbjct: 469  LPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKG 528

Query: 460  DKFDSRSARCIFIGYPMGQKGWKLYNLETHKVLISRDVIFLEDVKPFLSRTDTSPSPSHL 281
            DKF +RS RC+F+GYP GQKGW+L++LE  K  +SRDVIF E   P+   +    + SH 
Sbjct: 529  DKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPYSKMSCNRFTSSHK 588

Query: 280  PVLQSPCGADESPT 239
              L +     E  T
Sbjct: 589  AFLAAVTAGMEPTT 602