BLASTX nr result
ID: Rauwolfia21_contig00024919
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00024919
(983 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002519775.1| conserved hypothetical protein [Ricinus comm... 56 3e-09
gb|AEK71885.1| hypothetical chloroplast RF2 [Pinzona coriacea] 57 7e-09
gb|AEK78216.1| hypothetical chloroplast RF2 [Drosophyllum lusita... 56 7e-09
gb|AFB74311.1| Ycf2 protein (chloroplast) [Portulacaria afra] 55 1e-08
gb|AEK71475.1| hypothetical chloroplast RF2 [Eucryphia lucida] 53 1e-08
gb|AEK78208.1| hypothetical chloroplast RF2 [Claytonia virginica] 55 1e-08
gb|AEK78293.1| hypothetical chloroplast RF2 [Talinum paniculatum] 55 1e-08
emb|CAA30743.1| unnamed protein product [Spinacia oleracea] 53 1e-08
gb|AFB74306.1| Ycf2 protein (chloroplast) [Anredera baselloides] 55 2e-08
gb|AEK78195.1| hypothetical chloroplast RF2 [Basella alba] 55 2e-08
ref|NP_084839.1| Ycf2 [Lotus japonicus] gi|13518498|ref|NP_08485... 54 3e-08
ref|YP_247643.1| Ycf2 [Cucumis sativus] gi|67511442|emb|CAJ00802... 54 3e-08
sp|Q2QD30.1|YCF2_CUCSA RecName: Full=Protein Ycf2 gi|74027143|gb... 54 3e-08
ref|YP_247661.1| Ycf2 [Cucumis sativus] gi|67511460|emb|CAJ00820... 54 3e-08
ref|NP_055004.1| Ycf2 [Spinacia oleracea] gi|19855392|sp|P08973.... 53 4e-08
gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum] 53 5e-08
gb|AEK71793.1| hypothetical chloroplast RF2 [Malesherbia lineari... 53 5e-08
gb|ADD30890.1| putative RF2 protein [Berberidopsis corallina] gi... 53 5e-08
gb|ABQ14883.1| Ycf2 [Paeonia brownii] 54 5e-08
gb|AEK78283.1| hypothetical chloroplast RF2 [Stegnosperma halimi... 53 5e-08
>ref|XP_002519775.1| conserved hypothetical protein [Ricinus communis]
gi|223541014|gb|EEF42571.1| conserved hypothetical
protein [Ricinus communis]
Length = 124
Score = 56.2 bits (134), Expect(2) = 3e-09
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
++P+ I EDLF+H+ WAPRI CP FLFDC P EL P
Sbjct: 32 LNPQQIVEDLFNHIVWAPRIWCPWGFLFDCIEKPNELGFP 71
Score = 32.7 bits (73), Expect(2) = 3e-09
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
KP +G PYWAR+F GK I+
Sbjct: 64 KPNELGFPYWARSFRGKRIIY 84
>gb|AEK71885.1| hypothetical chloroplast RF2 [Pinzona coriacea]
Length = 2297
Score = 57.4 bits (137), Expect(2) = 7e-09
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI CP FLFDC P EL P
Sbjct: 2078 LDPQQIEEDLFNHIVWAPRIWCPWGFLFDCIERPNELGFP 2117
Score = 30.0 bits (66), Expect(2) = 7e-09
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F G+ I+
Sbjct: 2110 RPNELGFPYWARSFRGERIIY 2130
>gb|AEK78216.1| hypothetical chloroplast RF2 [Drosophyllum lusitanicum]
Length = 2287
Score = 55.8 bits (133), Expect(2) = 7e-09
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI PR FLFDC P EL P
Sbjct: 2068 LGPQQIEEDLFNHIVWAPRIWHPRGFLFDCIERPNELGFP 2107
Score = 31.6 bits (70), Expect(2) = 7e-09
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2100 RPNELGFPYWARSFRGKRIIY 2120
>gb|AFB74311.1| Ycf2 protein (chloroplast) [Portulacaria afra]
Length = 2285
Score = 55.5 bits (132), Expect(2) = 1e-08
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI PR FLFDC P EL P
Sbjct: 2060 LDPQQIEEDLFNHIVWAPRIWNPRGFLFDCIERPTELGFP 2099
Score = 31.2 bits (69), Expect(2) = 1e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2092 RPTELGFPYWARSFRGKRIIY 2112
>gb|AEK71475.1| hypothetical chloroplast RF2 [Eucryphia lucida]
Length = 2270
Score = 52.8 bits (125), Expect(2) = 1e-08
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI P FLFDC P EL P
Sbjct: 2051 LDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFP 2090
Score = 33.9 bits (76), Expect(2) = 1e-08
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK IH
Sbjct: 2083 RPNELGFPYWARSFRGKRIIH 2103
>gb|AEK78208.1| hypothetical chloroplast RF2 [Claytonia virginica]
Length = 2269
Score = 55.5 bits (132), Expect(2) = 1e-08
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI PR FLFDC P EL P
Sbjct: 2053 LDPQQIEEDLFNHIVWAPRIWNPRGFLFDCIERPTELGFP 2092
Score = 31.2 bits (69), Expect(2) = 1e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2085 RPTELGFPYWARSFRGKRIIY 2105
>gb|AEK78293.1| hypothetical chloroplast RF2 [Talinum paniculatum]
Length = 2199
Score = 55.5 bits (132), Expect(2) = 1e-08
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI PR FLFDC P EL P
Sbjct: 2056 LDPQQIEEDLFNHIVWAPRIWNPRGFLFDCIERPTELGFP 2095
Score = 31.2 bits (69), Expect(2) = 1e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2088 RPTELGFPYWARSFRGKRIIY 2108
>emb|CAA30743.1| unnamed protein product [Spinacia oleracea]
Length = 2131
Score = 52.8 bits (125), Expect(2) = 1e-08
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI P FLFDC P EL P
Sbjct: 1896 LDPQQIEEDLFNHIVWAPRIWNPWGFLFDCIERPNELGFP 1935
Score = 33.9 bits (76), Expect(2) = 1e-08
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK TI+
Sbjct: 1928 RPNELGFPYWARSFRGKRTIY 1948
>gb|AFB74306.1| Ycf2 protein (chloroplast) [Anredera baselloides]
Length = 2280
Score = 55.5 bits (132), Expect(2) = 2e-08
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI PR FLFDC P EL P
Sbjct: 2055 LDPQQIEEDLFNHIVWAPRIWNPRGFLFDCIERPTELGFP 2094
Score = 30.4 bits (67), Expect(2) = 2e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2087 RPTELGFPYWARSFGGKRIIY 2107
>gb|AEK78195.1| hypothetical chloroplast RF2 [Basella alba]
Length = 2258
Score = 55.5 bits (132), Expect(2) = 2e-08
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI PR FLFDC P EL P
Sbjct: 2042 LDPQQIEEDLFNHIVWAPRIWNPRGFLFDCIERPTELGFP 2081
Score = 30.4 bits (67), Expect(2) = 2e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2074 RPTELGFPYWARSFGGKRIIY 2094
>ref|NP_084839.1| Ycf2 [Lotus japonicus] gi|13518498|ref|NP_084856.1| Ycf2 [Lotus
japonicus] gi|23822370|sp|Q9B1K6.1|YCF2_LOTJA RecName:
Full=Protein Ycf2 gi|13359021|dbj|BAB33238.1|
hypothetical protein [Lotus japonicus]
gi|13359039|dbj|BAB33256.1| hypothetical protein [Lotus
japonicus]
Length = 2298
Score = 53.9 bits (128), Expect(2) = 3e-08
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -3
Query: 726 KHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ I+EDLF+H+ WAPRI CP FLFDC P EL P
Sbjct: 2075 QQIEEDLFNHIVWAPRIWCPWGFLFDCIERPNELGFP 2111
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2104 RPNELGFPYWARSFRGKRIIY 2124
>ref|YP_247643.1| Ycf2 [Cucumis sativus] gi|67511442|emb|CAJ00802.1| Ycf2 [Cucumis
sativus]
Length = 1990
Score = 53.9 bits (128), Expect(2) = 3e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI P FLFDC P EL +P
Sbjct: 1767 LDPQQIEEDLFNHIVWAPRIWSPWGFLFDCIERPNELGVP 1806
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 1799 RPNELGVPYWARSFRGKRIIY 1819
>sp|Q2QD30.1|YCF2_CUCSA RecName: Full=Protein Ycf2 gi|74027143|gb|AAZ94693.1| ycf2 protein
[Cucumis sativus] gi|74027160|gb|AAZ94710.1| ycf2 protein
[Cucumis sativus] gi|115432862|gb|ABI97475.1|
hypothetical chloroplast RF2 [Cucumis sativus]
gi|115432865|gb|ABI97478.1| hypothetical chloroplast RF2
[Cucumis sativus] gi|115498347|gb|ABI98789.1|
hypothetical chloroplast RF2 [Cucumis sativus]
gi|115498365|gb|ABI98807.1| hypothetical chloroplast RF2
[Cucumis sativus]
Length = 1988
Score = 53.9 bits (128), Expect(2) = 3e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI P FLFDC P EL +P
Sbjct: 1767 LDPQQIEEDLFNHIVWAPRIWSPWGFLFDCIERPNELGVP 1806
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 1799 RPNELGVPYWARSFRGKRIIY 1819
>ref|YP_247661.1| Ycf2 [Cucumis sativus] gi|67511460|emb|CAJ00820.1| ycf2 [Cucumis
sativus]
Length = 1988
Score = 53.9 bits (128), Expect(2) = 3e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI P FLFDC P EL +P
Sbjct: 1767 LDPQQIEEDLFNHIVWAPRIWSPWGFLFDCIERPNELGVP 1806
Score = 31.6 bits (70), Expect(2) = 3e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 1799 RPNELGVPYWARSFRGKRIIY 1819
>ref|NP_055004.1| Ycf2 [Spinacia oleracea] gi|19855392|sp|P08973.2|YCF2_SPIOL RecName:
Full=Protein Ycf2 gi|7636179|emb|CAB88802.1| ycf2 protein
[Spinacia oleracea]
Length = 2131
Score = 52.8 bits (125), Expect(2) = 4e-08
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI P FLFDC P EL P
Sbjct: 1896 LDPQQIEEDLFNHIVWAPRIWNPWGFLFDCIERPNELGFP 1935
Score = 32.3 bits (72), Expect(2) = 4e-08
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK +I+
Sbjct: 1928 RPNELGFPYWARSFRGKRSIY 1948
>gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum]
Length = 2316
Score = 53.1 bits (126), Expect(2) = 5e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
++P+ I+EDLF+H+ WAPRI P FLFDC P EL P
Sbjct: 2081 LNPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFP 2120
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2113 RPNELGFPYWARSFRGKRIIY 2133
>gb|AEK71793.1| hypothetical chloroplast RF2 [Malesherbia linearifolia]
Length = 2302
Score = 52.8 bits (125), Expect(2) = 5e-08
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI P FLFDC P EL P
Sbjct: 2083 LDPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFP 2122
Score = 32.0 bits (71), Expect(2) = 5e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2115 RPNELGFPYWARSFRGKQIIY 2135
>gb|ADD30890.1| putative RF2 protein [Berberidopsis corallina]
gi|340807100|gb|AEK71702.1| hypothetical chloroplast RF2
[Berberidopsis corallina]
Length = 2298
Score = 53.1 bits (126), Expect(2) = 5e-08
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
++P+ I+EDLF+H+ WAPRI P FLFDC P EL P
Sbjct: 2079 LNPQQIEEDLFNHIVWAPRIWRPWGFLFDCIERPNELGFP 2118
Score = 31.6 bits (70), Expect(2) = 5e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2111 RPNELGFPYWARSFRGKRIIY 2131
>gb|ABQ14883.1| Ycf2 [Paeonia brownii]
Length = 2285
Score = 53.5 bits (127), Expect(2) = 5e-08
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI P FLFDC P EL P
Sbjct: 2064 LDPQQIEEDLFNHIVWAPRIWSPWGFLFDCIERPNELGFP 2103
Score = 31.2 bits (69), Expect(2) = 5e-08
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK ++
Sbjct: 2096 RPNELGFPYWARSFRGKRIVY 2116
>gb|AEK78283.1| hypothetical chloroplast RF2 [Stegnosperma halimifolium]
Length = 2272
Score = 52.8 bits (125), Expect(2) = 5e-08
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = -3
Query: 735 ISPKHIQEDLFHHMAWAPRI*CPRAFLFDCTVNPKELDLP 616
+ P+ I+EDLF+H+ WAPRI P FLFDC P EL P
Sbjct: 2055 LDPQQIEEDLFNHIVWAPRIWNPWGFLFDCIERPNELGFP 2094
Score = 32.0 bits (71), Expect(2) = 5e-08
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 640 KPQRIGSPYWARTFHGKYTIH 578
+P +G PYWAR+F GK I+
Sbjct: 2087 RPNELGFPYWARSFRGKQIIY 2107