BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00024911
         (296 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|2235447...    77   2e-12
ref|XP_003575180.1| PREDICTED: probable U6 snRNA-associated Sm-l...    72   8e-11
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri...    72   1e-10
ref|XP_006652331.1| PREDICTED: probable U6 snRNA-associated Sm-l...    71   2e-10
emb|CAD40963.2| OSJNBa0027P08.15 [Oryza sativa Japonica Group] g...    71   2e-10
ref|NP_001052905.1| Os04g0445800 [Oryza sativa Japonica Group] g...    71   2e-10
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is...    70   2e-10
ref|XP_004488097.1| PREDICTED: probable U6 snRNA-associated Sm-l...    70   2e-10
ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like prote...    70   2e-10
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5...    70   2e-10
gb|EOY30225.1| Small nuclear ribonucleoprotein family protein is...    70   3e-10
gb|EOY30224.1| Small nuclear ribonucleoprotein family protein is...    70   3e-10
gb|EOY30223.1| Small nuclear ribonucleoprotein family protein is...    70   3e-10
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote...    70   3e-10
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote...    70   4e-10
ref|XP_004975745.1| PREDICTED: probable U6 snRNA-associated Sm-l...    70   4e-10
gb|EMJ04688.1| hypothetical protein PRUPE_ppa022434mg, partial [...    70   4e-10
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote...    70   4e-10
gb|AFW58372.1| hypothetical protein ZEAMMB73_585309, partial [Ze...    70   4e-10
ref|NP_001146445.1| hypothetical protein [Zea mays] gi|219887259...    70   4e-10

>ref|XP_002516250.1| lsm1, putative [Ricinus communis] gi|223544736|gb|EEF46252.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/41 (90%), Positives = 37/41 (90%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM CVSE EIKRAQKAEREATDLKGSMRKRMEFLD D
Sbjct: 88  ELPSHMTCVSEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128


>ref|XP_003575180.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
           [Brachypodium distachyon]
          Length = 128

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM CVSE EI+RA+KAEREA DLKGSMRKRMEFLD D
Sbjct: 88  ELPAHMTCVSEAEIRRAEKAEREARDLKGSMRKRMEFLDFD 128


>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
           gi|222841552|gb|EEE79099.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  VSE EIKRAQKAEREATDLKG+MRKRMEFLD+D
Sbjct: 88  ELPPHMTRVSEAEIKRAQKAEREATDLKGTMRKRMEFLDLD 128


>ref|XP_006652331.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
           [Oryza brachyantha]
          Length = 128

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/41 (80%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM CVSE EI++A+KAEREA DLKGSMRKRMEFLD D
Sbjct: 88  ELPAHMTCVSEAEIRKAEKAEREARDLKGSMRKRMEFLDFD 128


>emb|CAD40963.2| OSJNBa0027P08.15 [Oryza sativa Japonica Group]
           gi|116310232|emb|CAH67241.1| OSIGBa0140O07.9 [Oryza
           sativa Indica Group]
          Length = 136

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/41 (80%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM CVSE EI++A+KAEREA DLKGSMRKRMEFLD D
Sbjct: 96  ELPAHMTCVSEAEIRKAEKAEREARDLKGSMRKRMEFLDFD 136


>ref|NP_001052905.1| Os04g0445800 [Oryza sativa Japonica Group]
           gi|113564476|dbj|BAF14819.1| Os04g0445800 [Oryza sativa
           Japonica Group] gi|218194932|gb|EEC77359.1| hypothetical
           protein OsI_16058 [Oryza sativa Indica Group]
           gi|222628944|gb|EEE61076.1| hypothetical protein
           OsJ_14946 [Oryza sativa Japonica Group]
          Length = 129

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 33/41 (80%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM CVSE EI++A+KAEREA DLKGSMRKRMEFLD D
Sbjct: 89  ELPAHMTCVSEAEIRKAEKAEREARDLKGSMRKRMEFLDFD 129


>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 128

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/41 (80%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM CVS  EI+RAQKAEREA DLKG+MRKRMEFLD+D
Sbjct: 88  ELPPHMTCVSAAEIRRAQKAEREARDLKGTMRKRMEFLDLD 128


>ref|XP_004488097.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
           [Cicer arietinum]
          Length = 128

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HMICVSE +I++AQKAER+A+DLKG MRKRMEFLD D
Sbjct: 88  ELPPHMICVSEADIRKAQKAERDASDLKGMMRKRMEFLDFD 128


>ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           lycopersicum] gi|565351988|ref|XP_006342929.1|
           PREDICTED: probable U6 snRNA-associated Sm-like protein
           LSm1-like [Solanum tuberosum]
          Length = 128

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  VSE EI+RAQKAER++TDLKGSMRKRMEFLDMD
Sbjct: 88  ELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRKRMEFLDMD 128


>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
           gi|566149434|ref|XP_006369123.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
           gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|550347483|gb|ERP65692.1| small
           nuclear ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  VSE EI+RAQKAEREATDLKG+MRKRMEFLD+D
Sbjct: 88  ELPPHMTRVSEAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128


>gb|EOY30225.1| Small nuclear ribonucleoprotein family protein isoform 3, partial
           [Theobroma cacao]
          Length = 93

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/41 (85%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  VS  EIKRAQKAEREATDLKGSMRKRMEFLD D
Sbjct: 53  ELPSHMTPVSAAEIKRAQKAEREATDLKGSMRKRMEFLDFD 93


>gb|EOY30224.1| Small nuclear ribonucleoprotein family protein isoform 2, partial
           [Theobroma cacao]
          Length = 114

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/41 (85%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  VS  EIKRAQKAEREATDLKGSMRKRMEFLD D
Sbjct: 74  ELPSHMTPVSAAEIKRAQKAEREATDLKGSMRKRMEFLDFD 114


>gb|EOY30223.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 128

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/41 (85%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  VS  EIKRAQKAEREATDLKGSMRKRMEFLD D
Sbjct: 88  ELPSHMTPVSAAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128


>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
           vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
           product [Vitis vinifera]
          Length = 128

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/41 (85%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  V E EIKRAQKAEREATDLKGSMRKRMEFLD D
Sbjct: 88  ELPPHMTRVPEAEIKRAQKAEREATDLKGSMRKRMEFLDFD 128


>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           tuberosum]
          Length = 128

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  V E EI+RAQKAEREATDLKG+MRKRMEFLDMD
Sbjct: 88  ELPPHMTRVPEAEIRRAQKAEREATDLKGTMRKRMEFLDMD 128


>ref|XP_004975745.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
           [Setaria italica]
          Length = 128

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM CVSE EI++A+KAEREA DLKG+MRKRMEFLD D
Sbjct: 88  ELPAHMTCVSEAEIRKAEKAEREARDLKGTMRKRMEFLDFD 128


>gb|EMJ04688.1| hypothetical protein PRUPE_ppa022434mg, partial [Prunus persica]
          Length = 160

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  V E EIKRAQKAER+ATDLKGSMRKRMEFLD D
Sbjct: 120 ELPPHMTLVPEAEIKRAQKAERDATDLKGSMRKRMEFLDFD 160


>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           lycopersicum]
          Length = 128

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM  V E EI+RAQKAEREATDLKG+MRKRMEFLDMD
Sbjct: 88  ELPPHMTRVPEAEIRRAQKAEREATDLKGTMRKRMEFLDMD 128


>gb|AFW58372.1| hypothetical protein ZEAMMB73_585309, partial [Zea mays]
          Length = 147

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM CVSE EI++A+KAEREA DLKG+MRKRMEFLD D
Sbjct: 107 ELPAHMTCVSEAEIRKAEKAEREARDLKGTMRKRMEFLDFD 147


>ref|NP_001146445.1| hypothetical protein [Zea mays] gi|219887259|gb|ACL54004.1| unknown
           [Zea mays] gi|223975439|gb|ACN31907.1| unknown [Zea
           mays] gi|413918444|gb|AFW58376.1| hypothetical protein
           ZEAMMB73_585309 [Zea mays]
          Length = 168

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +2

Query: 2   ELPQHMICVSETEIKRAQKAEREATDLKGSMRKRMEFLDMD 124
           ELP HM CVSE EI++A+KAEREA DLKG+MRKRMEFLD D
Sbjct: 128 ELPAHMTCVSEAEIRKAEKAEREARDLKGTMRKRMEFLDFD 168