BLASTX nr result
ID: Rauwolfia21_contig00024815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00024815
(580 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containi... 102 9e-20
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ... 102 9e-20
ref|XP_002316137.1| pentatricopeptide repeat-containing family p... 102 9e-20
ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citr... 100 2e-19
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protei... 99 6e-19
gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus pe... 99 8e-19
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus... 99 1e-18
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi... 99 1e-18
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr... 97 2e-18
ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Caps... 97 2e-18
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]... 97 2e-18
gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis] 97 4e-18
gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays] 96 5e-18
ref|XP_002875182.1| pentatricopeptide repeat-containing protein ... 96 9e-18
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali... 96 9e-18
ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group] g... 95 1e-17
ref|XP_006653155.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
>ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cicer arietinum]
Length = 602
Score = 102 bits (253), Expect = 9e-20
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVCGDCH+AAK IS + GR IILRDVQRFHHF+DGKCSCGDYW
Sbjct: 552 TIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 602
>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 586
Score = 102 bits (253), Expect = 9e-20
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVCGDCH+AAK IS + GR IILRDVQRFHHF+DGKCSCGDYW
Sbjct: 536 TIRVVKNLRVCGDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 586
>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865177|gb|EEF02308.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 601
Score = 102 bits (253), Expect = 9e-20
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVCGDCHSAAKLIS L R IILRDVQRFHHF+DGKCSCGDYW
Sbjct: 551 TIRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601
>ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citrus clementina]
gi|568859243|ref|XP_006483151.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Citrus sinensis]
gi|557540892|gb|ESR51936.1| hypothetical protein
CICLE_v10031011mg [Citrus clementina]
Length = 598
Score = 100 bits (250), Expect = 2e-19
Identities = 43/51 (84%), Positives = 47/51 (92%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVCGDCHSAAK+IS + R I+LRDVQRFHHFRDGKCSCGD+W
Sbjct: 548 TIRVVKNLRVCGDCHSAAKIISLIFNRQIVLRDVQRFHHFRDGKCSCGDFW 598
>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Fragaria vesca subsp. vesca]
Length = 593
Score = 100 bits (248), Expect = 4e-19
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVCGDCHSAAK IS + R I+LRDVQRFHHF+DGKCSCGDYW
Sbjct: 543 TIRVVKNLRVCGDCHSAAKYISLMFNRQIVLRDVQRFHHFKDGKCSCGDYW 593
>gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 604
Score = 99.4 bits (246), Expect = 6e-19
Identities = 44/51 (86%), Positives = 47/51 (92%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVCGDCH+AAKLIS + R IILRDVQRFHHFRDGKCSCGD+W
Sbjct: 554 TIRVVKNLRVCGDCHAAAKLISQIFDRQIILRDVQRFHHFRDGKCSCGDFW 604
>gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
Length = 593
Score = 99.0 bits (245), Expect = 8e-19
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVCGDCHSAAK IS + R IILRDVQRFHHF++GKCSCGDYW
Sbjct: 543 TIRVVKNLRVCGDCHSAAKYISLIFNRQIILRDVQRFHHFKEGKCSCGDYW 593
>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
protein product [Vitis vinifera]
Length = 595
Score = 99.0 bits (245), Expect = 8e-19
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVCGDCHSAAKLIS + R IILRDVQRFHHF+DGKCSC DYW
Sbjct: 545 TIRVVKNLRVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595
>gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
Length = 600
Score = 98.6 bits (244), Expect = 1e-18
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVC DCH+AAK IS + GR IILRDVQRFHHF+DGKCSCGDYW
Sbjct: 550 TIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 600
>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 98.6 bits (244), Expect = 1e-18
Identities = 43/51 (84%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVC DCH+AAK IS + GR IILRDVQRFHHF+DGKCSCGDYW
Sbjct: 559 TIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDYW 609
>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
gi|557092383|gb|ESQ33030.1| hypothetical protein
EUTSA_v10003852mg [Eutrema salsugineum]
Length = 605
Score = 97.4 bits (241), Expect = 2e-18
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVC DCH+AAKLIS + GR ++LRDVQRFHHF DGKCSCGD+W
Sbjct: 555 TIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 605
>ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Capsella rubella]
gi|482559454|gb|EOA23645.1| hypothetical protein
CARUB_v10016843mg [Capsella rubella]
Length = 630
Score = 97.4 bits (241), Expect = 2e-18
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVC DCH+AAKLIS + GR ++LRDVQRFHHF DGKCSCGD+W
Sbjct: 580 TIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 630
>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 97.4 bits (241), Expect = 2e-18
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRV KNLR+CGDCH+AAKLISF+ GR I++RDVQRFH F DGKCSCGD+W
Sbjct: 554 TIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604
>ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02980 gi|3461822|gb|AAC32916.1| hypothetical protein
[Arabidopsis thaliana] gi|330250557|gb|AEC05651.1| RNA
editing factor OTP85 [Arabidopsis thaliana]
Length = 603
Score = 97.4 bits (241), Expect = 2e-18
Identities = 41/51 (80%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVC DCH+AAKLIS + GR ++LRDVQRFHHF DGKCSCGD+W
Sbjct: 553 TIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis]
Length = 594
Score = 96.7 bits (239), Expect = 4e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVC DCHSAAK IS +S R IILRDVQRFHHF +GKCSCGDYW
Sbjct: 544 TIRVVKNLRVCRDCHSAAKFISLVSRRQIILRDVQRFHHFNEGKCSCGDYW 594
>gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 96.3 bits (238), Expect = 5e-18
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TI++ KNLRVC DCH+A KLIS L+GR II+RD+QRFHHF+DGKCSCGDYW
Sbjct: 643 TIQIKKNLRVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
>ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321020|gb|EFH51441.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 605
Score = 95.5 bits (236), Expect = 9e-18
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVC DCHSAAKLIS + GR ++LRDVQRFHHF DGKCSC D+W
Sbjct: 555 TIRVVKNLRVCRDCHSAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCRDFW 605
>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 95.5 bits (236), Expect = 9e-18
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TIRVVKNLRVC DCH+AAKLIS + GR ++ RDVQRFHHF DGKCSCGD+W
Sbjct: 553 TIRVVKNLRVCRDCHNAAKLISLIFGRKVVXRDVQRFHHFEDGKCSCGDFW 603
>ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza
sativa Japonica Group] gi|215737111|dbj|BAG96040.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 95.1 bits (235), Expect = 1e-17
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TI++ KNLRVC DCH+A KLIS ++GR II+RD+QRFHHF+DGKCSCGDYW
Sbjct: 684 TIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
>ref|XP_006653155.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Oryza brachyantha]
Length = 744
Score = 95.1 bits (235), Expect = 1e-17
Identities = 38/51 (74%), Positives = 46/51 (90%)
Frame = -2
Query: 579 TIRVVKNLRVCGDCHSAAKLISFLSGRSIILRDVQRFHHFRDGKCSCGDYW 427
TI++ KNLRVC DCH+A KLIS ++GR II+RD+QRFHHF+DGKCSCGDYW
Sbjct: 694 TIQIKKNLRVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 744