BLASTX nr result

ID: Rauwolfia21_contig00024738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00024738
         (1364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357458.1| PREDICTED: uncharacterized protein LOC102585...    73   3e-10
ref|XP_006358454.1| PREDICTED: FBD-associated F-box protein At5g...    59   4e-06

>ref|XP_006357458.1| PREDICTED: uncharacterized protein LOC102585642 [Solanum tuberosum]
          Length = 1384

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 98/411 (23%), Positives = 174/411 (42%), Gaps = 25/411 (6%)
 Frame = +1

Query: 37   LNKWIELALEIVVKKLELIVSGAF-----SLPPTVFEAKLLEDLSVDRFYLLVPV----- 186
            +++WI LA    +K+L++ +   +     SLP T F AK L  L +  F L  P+     
Sbjct: 110  IDEWIRLATNNCIKELDVHIKRQYGEDWYSLPGTTFTAKSLIVLRLGGFKLDFPLIVDHM 169

Query: 187  ---KFSCFSSEKTICLSRLCVDGVSGCHWIEFLKLHQVWGIKNF-----EPFSYLGPKGL 342
               K    S    +   +  ++  S C  +E L+L +  G+K+        F  L     
Sbjct: 170  KLTKLRELSLTDVLLEEQTILEICSACPAVEDLRLIRCEGVKDLLISDLPRFIKLTIHQS 229

Query: 343  CVFFCDCKNMEIEAPNLEVFRCSFEYELWDKG-RLNFKTAQNLKCLELLHVSIPDMFFDD 519
                 + +++ I+A NL+    S EY   +   + +  T + LK L +    I D+  ++
Sbjct: 230  NEITWEYRSIRIQAVNLQ----SLEYRGCNSELKFDVTTFKLLKELSITFELITDLVVEN 285

Query: 520  FSYNFPKLERFENQWLLDLKMRQNIQSVT*KLAF--GRFWWTVAAAAVGG-RFEYCSI*L 690
                 P LE+ E  +   L   +    +  +L F  G+    +  AA    RFEY +   
Sbjct: 286  LVSELPLLEKLELNFCFKLVTLKFSSCMLRQLTFRSGKSLKEIVIAAPNLIRFEYGA--- 342

Query: 691  CFS*MRIIPTL-SLTNSSRYWVSNIYLETMHSQVVDYSWFCRLKEFLKNLIPSTISLDIL 867
                 R +P + S+T SS   +   YL+ M S  +  SWF +LK +L       + L + 
Sbjct: 343  -----RKLPDIFSMTTSS---LQECYLKLMPSDHLSTSWFQKLKGYLSRFKQLNL-LVLS 393

Query: 868  FEEKTRLRFDRKMADELAIPEIYIHQLSLSLARMPSPSYFSTVLEGIFWSCRPAWINQYS 1047
             +  T      ++   L+ P   +  + +   ++     F T+L+G+ W+C P  ++   
Sbjct: 394  IDSTTNTFIVEELNGTLSCPLSVVKHVKIK--KVMESLNFETLLDGLLWTCHPETLSIDR 451

Query: 1048 YHD*NIEFTKFLVKKLMAERNQDY--NSQGINPWERDLMEVKVEFWRKNQG 1194
              + N +F +FL +KLM         +S+ I  W   L E++VE   +  G
Sbjct: 452  TWEHNEDFVQFLREKLMQREIATVCCDSRRIKCWRHYLKEIEVESSTRQYG 502


>ref|XP_006358454.1| PREDICTED: FBD-associated F-box protein At5g38590-like [Solanum
            tuberosum]
          Length = 411

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 4/227 (1%)
 Frame = +1

Query: 523  SYNFPKLERFENQWLLDLKMRQNIQSVT*KLAFGRFWWTVAAAAVGGRFEYCSI*LCFS* 702
            S+ F      E   L++L+  +++     K+ F    W + A  +   FEY         
Sbjct: 176  SFIFEYCSDLETIELVNLQKIKSVSLKVLKIRFSGSIWEIDAPNLVS-FEYMG------- 227

Query: 703  MRIIPTLSLTNSSRYWV-SNIYLETMHSQVVDYSWFCRLKEFLKNLIPSTISLDILFEEK 879
               IP L +   SR    S I L  + +  ++  WFC+L++FL N I S   + + F E 
Sbjct: 228  -NQIPELQIVRESRQLKHSKIILHRLDN--INADWFCKLRKFLSNSI-SWSQVSLYFYEC 283

Query: 880  TRLRF-DRKMADELAIPEIYIHQLSLSLARMPSPSYFSTVLEGIFWSCRPAWINQYSYHD 1056
              ++  D +    +A P++ I  +++       PS+    ++ + WSC+P  +N      
Sbjct: 284  AEIKMKDLQQHHRVATPQVDILDVNILWQNREYPSF----VDALVWSCQPRRLNLQLTR- 338

Query: 1057 *NIEFTKFLVKKLMAERNQ-DYNSQGINPWERDLMEVKV-EFWRKNQ 1191
               E     + +LM  +N     S G NPW   L EVKV +F RK +
Sbjct: 339  ---EMVTVFIDRLMHMKNSIQSTSHGSNPWYSQLKEVKVHKFDRKKE 382


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