BLASTX nr result
ID: Rauwolfia21_contig00024730
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00024730
(343 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AHG94966.1| mitochondrial PPR protein [Nicotiana tomentosifor... 76 4e-12
gb|ACU33853.1| PPR1 protein [Capsicum annuum] 71 1e-10
gb|AAM52339.1| fertility restorer [Petunia x hybrida] 69 6e-10
gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosifor... 68 1e-09
ref|XP_006366332.1| PREDICTED: putative pentatricopeptide repeat... 68 1e-09
gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida] 67 2e-09
gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosifor... 67 3e-09
ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat... 67 3e-09
ref|XP_004240455.1| PREDICTED: putative pentatricopeptide repeat... 67 3e-09
ref|XP_006366329.1| PREDICTED: putative pentatricopeptide repeat... 66 5e-09
ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat... 65 7e-09
gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida] 65 9e-09
ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat... 64 3e-08
ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat... 62 6e-08
gb|AHG94965.1| mitochondrial PPR protein [Nicotiana tomentosifor... 62 1e-07
ref|XP_004295548.1| PREDICTED: putative pentatricopeptide repeat... 62 1e-07
ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. l... 62 1e-07
ref|XP_006344061.1| PREDICTED: putative pentatricopeptide repeat... 61 1e-07
ref|XP_006300878.1| hypothetical protein CARUB_v10019968mg [Caps... 61 2e-07
>gb|AHG94966.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 479
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = -1
Query: 235 RKIDESWNTRNKSWFCTN--DIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQY 62
R S +T+ K W +++CL+DAL L++QM+ T+PLPS++ F++LL ++ M+ Y
Sbjct: 38 RDYSSSISTKGKPWVPKGFENVKCLDDALSLFRQMVETKPLPSLVSFSRLLKTVINMKHY 97
Query: 61 SAVVSLFRNMCVLGVPVDVY 2
SAVVSLF M LG+P DV+
Sbjct: 98 SAVVSLFGEMQKLGIPADVF 117
>gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/79 (41%), Positives = 53/79 (67%)
Frame = -1
Query: 247 FHSARKIDESWNTRNKSWFCTNDIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKME 68
FHS+ S++ + F ++ CL+DA+ L+ +M+ +PLPSVI F++L ++ M+
Sbjct: 18 FHSSSSSSRSFSAKAHINF-DKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMK 76
Query: 67 QYSAVVSLFRNMCVLGVPV 11
YSAVVSLFR M +LG+P+
Sbjct: 77 HYSAVVSLFREMRILGIPI 95
>gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/60 (48%), Positives = 46/60 (76%)
Frame = -1
Query: 181 DIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVDVY 2
+++CL+DA L++QM+ T+PLPS + F++LL LV M+ YS+VVS+FR + L +PVD +
Sbjct: 49 NVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAF 108
>gb|AHG94963.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 68.2 bits (165), Expect = 1e-09
Identities = 29/58 (50%), Positives = 45/58 (77%)
Frame = -1
Query: 181 DIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVD 8
+++CL+DA+ L++QM+ +PLPSV F++L ++ ME YSAVVSLFR M LG+P++
Sbjct: 52 NVKCLDDAVTLFRQMVRKQPLPSVFDFSKLFKTMLNMEHYSAVVSLFREMQKLGIPIN 109
>ref|XP_006366332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 592
Score = 68.2 bits (165), Expect = 1e-09
Identities = 28/59 (47%), Positives = 46/59 (77%)
Frame = -1
Query: 184 NDIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVD 8
++ +CL+DAL L+KQM+ +PLPS++ F++L ++ M+ YSAV+SLFR M LG+P++
Sbjct: 48 SNFECLDDALILFKQMVTMKPLPSLVDFSKLFKTIINMKHYSAVLSLFREMQKLGIPIN 106
>gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/57 (52%), Positives = 45/57 (78%)
Frame = -1
Query: 181 DIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPV 11
+++CL+DA L++QM+ T+PLPSV+ F++LL LV M+ YS+VVSLFR + L +PV
Sbjct: 49 NVKCLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPV 105
>gb|AHG94964.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 595
Score = 66.6 bits (161), Expect = 3e-09
Identities = 28/58 (48%), Positives = 45/58 (77%)
Frame = -1
Query: 181 DIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVD 8
+++CL+DA+ L++QM+ +PLPSV F++L ++ M+ YSAVVSLFR M LG+P++
Sbjct: 52 NVKCLDDAVTLFRQMVRKQPLPSVFDFSKLFKTMLSMKHYSAVVSLFREMQKLGIPIN 109
>ref|XP_006367792.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 655
Score = 66.6 bits (161), Expect = 3e-09
Identities = 29/73 (39%), Positives = 49/73 (67%)
Frame = -1
Query: 226 DESWNTRNKSWFCTNDIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVS 47
+E+++ K ++CL+DA+ L+ QM+ +PLPSV+ F++L ++ M+ YSAV+S
Sbjct: 97 EENFSAEIKVGLNFEKLKCLDDAVNLFNQMVRMKPLPSVVDFSKLFKNMISMKHYSAVLS 156
Query: 46 LFRNMCVLGVPVD 8
LFR M LG+ +D
Sbjct: 157 LFREMQKLGIQID 169
>ref|XP_004240455.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum lycopersicum]
Length = 589
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = -1
Query: 256 LSEFHSARKIDESWNTRNKSWF---CTNDIQCLEDALRLYKQMILTRPLPSVIQFTQLLA 86
+S FH S + K +++ +CL+DA+ L+ QM+ +PLPSV+ F++L
Sbjct: 19 ISSFHVLHSYSSSQRSEVKGRVGLSSSSNFECLDDAVTLFHQMVTMKPLPSVVDFSKLFK 78
Query: 85 RLVKMEQYSAVVSLFRNMCVLGVPVD 8
++ M+ Y+AV+SLFR M LG+ +D
Sbjct: 79 NMISMKHYAAVISLFRQMQKLGIQID 104
>ref|XP_006366329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565401693|ref|XP_006366330.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X2 [Solanum
tuberosum]
Length = 590
Score = 65.9 bits (159), Expect = 5e-09
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = -1
Query: 181 DIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVD 8
+I CL+DA+ L+KQM+ + LPS++ F++L ++ M+ YSAV+SLFR M LG+P+D
Sbjct: 47 NINCLDDAVILFKQMVTMKRLPSLVDFSKLFKTMINMKHYSAVLSLFREMQKLGIPID 104
>ref|XP_006366331.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 588
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/60 (45%), Positives = 46/60 (76%)
Frame = -1
Query: 181 DIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVDVY 2
+++CL+DA+ L+ QM+ +PLPS++ F++L ++ M+ YSAVVSLFR M LG+P++ +
Sbjct: 42 NVKCLDDAVILFTQMVTMKPLPSLVDFSKLFKTIIIMKHYSAVVSLFREMRKLGIPINEF 101
>gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/57 (50%), Positives = 44/57 (77%)
Frame = -1
Query: 181 DIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPV 11
+++CL+DA L++QM+ T+PLPSV F++LL +V M+ YS+VVSLFR + L +PV
Sbjct: 49 NVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPV 105
>ref|XP_004240450.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Solanum lycopersicum]
Length = 590
Score = 63.5 bits (153), Expect = 3e-08
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = -1
Query: 169 LEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVD 8
L+DA+ L+ QM+ +PLPSV+ F++L ++KM+ YSA +SLFR M LG+P++
Sbjct: 51 LDDAVTLFHQMVTMKPLPSVVDFSKLFKTMIKMKHYSAAISLFRQMLKLGIPIN 104
>ref|XP_004240414.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum lycopersicum]
Length = 592
Score = 63.5 bits (153), Expect = 3e-08
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = -1
Query: 169 LEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVD 8
L+DA+ L+ QM+ +PLPSV+ F++L ++KM+ YSA +SLFR M LG+P++
Sbjct: 53 LDDAVTLFHQMVTMKPLPSVVDFSKLFKTMIKMKHYSAAISLFRQMLKLGIPIN 106
>ref|XP_006344105.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Solanum tuberosum]
Length = 590
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = -1
Query: 169 LEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPV 11
L+DA+ L+ QM+ +PLPSV+ F+QL ++KM+ YS +SLFR M LG+P+
Sbjct: 51 LDDAVTLFHQMVTMKPLPSVVHFSQLFKTMIKMKHYSGALSLFRQMLKLGIPI 103
>gb|AHG94965.1| mitochondrial PPR protein [Nicotiana tomentosiformis]
Length = 591
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = -1
Query: 181 DIQCLEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVD 8
++ CL+DA+ L+ +M+ T P PS + FT+L ++ M+ YSAVVSLF M +G+P++
Sbjct: 48 NVNCLDDAVTLFHEMVRTHPFPSAVYFTKLFKTMLNMKHYSAVVSLFGEMQKIGIPIN 105
>ref|XP_004295548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 567
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/56 (50%), Positives = 43/56 (76%)
Frame = -1
Query: 169 LEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVDVY 2
+EDAL ++ +M+ RPLPSV++FTQ+L +LVK++Q+ AV+S R M ++GV D Y
Sbjct: 55 VEDALNVFDEMLQRRPLPSVVRFTQILGQLVKLKQFEAVLSSNRQMGLVGVASDAY 110
>ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 550
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/56 (46%), Positives = 42/56 (75%)
Frame = -1
Query: 169 LEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVDVY 2
L DA+ L+++M+ TRP PS++ F +LL+ +VKM++Y V+SL + M VLG+ D+Y
Sbjct: 66 LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121
>ref|XP_006344061.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X1 [Solanum
tuberosum] gi|565354324|ref|XP_006344062.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X2 [Solanum
tuberosum] gi|565354326|ref|XP_006344063.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X3 [Solanum
tuberosum] gi|565354328|ref|XP_006344064.1| PREDICTED:
putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like isoform X4 [Solanum
tuberosum]
Length = 593
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = -1
Query: 169 LEDALRLYKQMILTRPLPSVIQFTQLLARLVKMEQYSAVVSLFRNMCVLGVPVD 8
L+DA+ L+ QM+ +PLPSV+ F++L ++ M+ YSAV+ LFR M LG+P+D
Sbjct: 53 LDDAVTLFHQMVTMKPLPSVVDFSKLFKTMISMKHYSAVLFLFRQMQKLGIPID 106
>ref|XP_006300878.1| hypothetical protein CARUB_v10019968mg [Capsella rubella]
gi|482569588|gb|EOA33776.1| hypothetical protein
CARUB_v10019968mg [Capsella rubella]
Length = 626
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/93 (37%), Positives = 55/93 (59%)
Frame = -1
Query: 280 PENPTPILLSEFHSARKIDESWNTRNKSWFCTNDIQCLEDALRLYKQMILTRPLPSVIQF 101
PEN +P +H A S R K +I+ L++A+ L+ +MI +RP PS++ F
Sbjct: 25 PENASPSFFFRWHRAFS-SVSNGYREKLRNGLREIK-LDEAMSLFSEMIQSRPRPSIVDF 82
Query: 100 TQLLARLVKMEQYSAVVSLFRNMCVLGVPVDVY 2
T+LL + KM++Y V+SLF+ M LG+ D+Y
Sbjct: 83 TKLLNAIAKMKKYDVVISLFQQMEKLGISHDLY 115