BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rauwolfia21_contig00024603
         (242 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   100   3e-19
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...   100   3e-19
ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat...    98   1e-18
gb|EOY09326.1| Mitochondrial RNAediting factor 1 [Theobroma cacao]     98   1e-18
ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat...    95   1e-17
ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Popu...    94   2e-17
ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat...    92   5e-17
gb|EPS65002.1| hypothetical protein M569_09774, partial [Genlise...    86   4e-15
gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis]      79   5e-13
ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ...    77   2e-12
ref|XP_004493520.1| PREDICTED: putative pentatricopeptide repeat...    74   2e-11
ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat...    71   2e-10
ref|XP_002864185.1| pentatricopeptide repeat-containing protein ...    71   2e-10
ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidop...    69   8e-10
ref|XP_006280222.1| hypothetical protein CARUB_v10026131mg [Caps...    68   1e-09
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...    60   4e-07
gb|ESW34235.1| hypothetical protein PHAVU_001G135800g [Phaseolus...    59   5e-07

>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  100 bits (248), Expect = 3e-19
 Identities = 52/76 (68%), Positives = 57/76 (75%)
 Frame = +1

Query: 10  KPPQNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINL 189
           KP QN  NQ SFEQNYR ICN LL  TRSRSL QG  LH+HI+K G+Q IPLVSH+LINL
Sbjct: 10  KPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINL 69

Query: 190 YSKLQLPRDAQDVFHE 237
           YSK QLP  +  VF E
Sbjct: 70  YSKTQLPLFSLQVFDE 85


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  100 bits (248), Expect = 3e-19
 Identities = 52/76 (68%), Positives = 57/76 (75%)
 Frame = +1

Query: 10  KPPQNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINL 189
           KP QN  NQ SFEQNYR ICN LL  TRSRSL QG  LH+HI+K G+Q IPLVSH+LINL
Sbjct: 10  KPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINL 69

Query: 190 YSKLQLPRDAQDVFHE 237
           YSK QLP  +  VF E
Sbjct: 70  YSKTQLPLFSLQVFDE 85


>ref|XP_006349560.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Solanum tuberosum]
          Length = 596

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 49/76 (64%), Positives = 59/76 (77%)
 Frame = +1

Query: 10  KPPQNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINL 189
           +P Q ++   SF  NYR ICN+LL  T+SRSL +G ALH+HIIK+G+QIIPLVSHHLIN 
Sbjct: 8   EPLQQTTFSQSFNLNYRAICNNLLSLTQSRSLPKGLALHAHIIKSGIQIIPLVSHHLINF 67

Query: 190 YSKLQLPRDAQDVFHE 237
           YSKLQ P D+  VFHE
Sbjct: 68  YSKLQRPIDSTLVFHE 83


>gb|EOY09326.1| Mitochondrial RNAediting factor 1 [Theobroma cacao]
          Length = 595

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 49/79 (62%), Positives = 58/79 (73%)
 Frame = +1

Query: 1   PESKPPQNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHL 180
           P  + PQN  NQ SFEQNYR ICN LL  T SRSL +G  LH+HIIKAG+Q IPL+SHHL
Sbjct: 4   PFPELPQNPLNQNSFEQNYRNICNVLLSLTHSRSLPKGLQLHAHIIKAGLQTIPLISHHL 63

Query: 181 INLYSKLQLPRDAQDVFHE 237
           +N YSK QLP  ++ +F E
Sbjct: 64  LNFYSKTQLPLFSRQIFFE 82


>ref|XP_004234835.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Solanum lycopersicum]
          Length = 596

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 48/76 (63%), Positives = 58/76 (76%)
 Frame = +1

Query: 10  KPPQNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINL 189
           +P Q ++   SF  NYR ICN+LL  T+SRSL +G ALH+HIIK+G+QIIPLVSHHLIN 
Sbjct: 8   EPLQETTFSQSFNLNYRAICNNLLSLTQSRSLPKGLALHAHIIKSGIQIIPLVSHHLINF 67

Query: 190 YSKLQLPRDAQDVFHE 237
           YSKLQ P D+  VF E
Sbjct: 68  YSKLQRPIDSTLVFDE 83


>ref|XP_002322703.2| hypothetical protein POPTR_0016s05390g [Populus trichocarpa]
           gi|550320891|gb|EEF04464.2| hypothetical protein
           POPTR_0016s05390g [Populus trichocarpa]
          Length = 627

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = +1

Query: 16  PQNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINLYS 195
           PQNS N+F  E+ Y  IC+ LL  TRSRSLL+GQ +H+HIIK+G+Q+IPLV H+LIN YS
Sbjct: 41  PQNSPNRFCSEKKYGHICDLLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYS 100

Query: 196 KLQLPRDAQDVFHEA 240
           K QLP  +  VF E+
Sbjct: 101 KTQLPLLSSQVFEES 115


>ref|XP_006493918.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Citrus sinensis]
          Length = 610

 Score = 92.4 bits (228), Expect = 5e-17
 Identities = 48/80 (60%), Positives = 55/80 (68%)
 Frame = +1

Query: 1   PESKPPQNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHL 180
           P  K PQN  NQ SFE  YR IC  LL  T +R+L +G  LH+HIIK+G+Q IPLVSHHL
Sbjct: 19  PNHKIPQNPLNQSSFELTYREICTLLLSLTYARNLTKGLQLHAHIIKSGLQTIPLVSHHL 78

Query: 181 INLYSKLQLPRDAQDVFHEA 240
           IN YSK Q P  A+ VF EA
Sbjct: 79  INFYSKTQRPLFARQVFDEA 98


>gb|EPS65002.1| hypothetical protein M569_09774, partial [Genlisea aurea]
          Length = 575

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 38/74 (51%), Positives = 54/74 (72%)
 Frame = +1

Query: 19  QNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINLYSK 198
           QN SN  +FE N R+ICN L+     R+L +GQ+LH H++K+G+Q+IP V HHLIN YSK
Sbjct: 1   QNFSNHINFESNCRLICNDLVDCISRRNLRRGQSLHGHVVKSGIQLIPQVCHHLINFYSK 60

Query: 199 LQLPRDAQDVFHEA 240
           ++LP  ++ VF E+
Sbjct: 61  VELPYRSEQVFIES 74


>gb|EXB53136.1| hypothetical protein L484_006956 [Morus notabilis]
          Length = 616

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/79 (51%), Positives = 50/79 (63%)
 Frame = +1

Query: 1   PESKPPQNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHL 180
           P   PP N        ++Y+ IC+ LL  TRSRSL +G  LH+ IIK+G+Q IPLVSHHL
Sbjct: 25  PPLNPPFNHKTLVEPIKDYKQICDLLLSQTRSRSLPKGLQLHAQIIKSGIQSIPLVSHHL 84

Query: 181 INLYSKLQLPRDAQDVFHE 237
           IN YSK Q P  +  VF E
Sbjct: 85  INFYSKTQFPLHSLQVFDE 103


>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355500175|gb|AES81378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 596

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = +1

Query: 31  NQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINLYSKLQLP 210
           + F+ +  YR +CN LL  T SRSL +G  LH+HIIK G+Q IPL+SHHLIN YSK  LP
Sbjct: 12  HSFNQQPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLP 71

Query: 211 RDAQDVFHEA 240
             +  +FH++
Sbjct: 72  YSSLQIFHDS 81


>ref|XP_004493520.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cicer arietinum]
          Length = 594

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/62 (56%), Positives = 45/62 (72%)
 Frame = +1

Query: 55  YRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINLYSKLQLPRDAQDVFH 234
           YR ICN LL  T SRSL +G  LH+HI+K G+Q IPL+SHHLIN YSK  LP  +  +F+
Sbjct: 19  YRKICNTLLSLTYSRSLPKGLQLHAHILKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFN 78

Query: 235 EA 240
           ++
Sbjct: 79  DS 80


>ref|XP_004301443.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Fragaria vesca subsp. vesca]
          Length = 590

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/75 (50%), Positives = 49/75 (65%)
 Frame = +1

Query: 7   SKPPQNSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLIN 186
           SKP  N +   S       ICN LL  T +R+L +G  LH+H+IK+G+Q IPLVSHHLIN
Sbjct: 6   SKPSLNPNPNHSSH-----ICNLLLSLTHARALPKGLQLHAHVIKSGLQSIPLVSHHLIN 60

Query: 187 LYSKLQLPRDAQDVF 231
            YSK QLP  ++ +F
Sbjct: 61  FYSKNQLPLFSRQIF 75


>ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310020|gb|EFH40444.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 588

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/73 (47%), Positives = 51/73 (69%)
 Frame = +1

Query: 22  NSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINLYSKL 201
           NSS  F    NY  IC+ LL   RSRS+++G  LH +I+K+G+ +IPLV+++LIN YSK 
Sbjct: 4   NSSAFFVPCHNYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKS 63

Query: 202 QLPRDAQDVFHEA 240
           QLP D++  F ++
Sbjct: 64  QLPFDSRRAFEDS 76


>ref|NP_200075.1| pentatricopeptide repeat protein MEF1 [Arabidopsis thaliana]
           gi|75180446|sp|Q9LTF4.1|PP429_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g52630 gi|8953718|dbj|BAA98081.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332008860|gb|AED96243.1| pentatricopeptide repeat
           protein MEF1 [Arabidopsis thaliana]
          Length = 588

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 33/73 (45%), Positives = 50/73 (68%)
 Frame = +1

Query: 22  NSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINLYSKL 201
           NSS  F    NY  IC+ LL   R+RS ++G  LH +++K+G+ +IPLV+++LIN YSK 
Sbjct: 4   NSSAFFVPCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKS 63

Query: 202 QLPRDAQDVFHEA 240
           QLP D++  F ++
Sbjct: 64  QLPFDSRRAFEDS 76


>ref|XP_006280222.1| hypothetical protein CARUB_v10026131mg [Capsella rubella]
           gi|482548926|gb|EOA13120.1| hypothetical protein
           CARUB_v10026131mg [Capsella rubella]
          Length = 588

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/73 (45%), Positives = 50/73 (68%)
 Frame = +1

Query: 22  NSSNQFSFEQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINLYSKL 201
           NSS  F    NY  IC+ LL   R+RS ++G  LH +++K+G+ +IPLV+++LIN YSK 
Sbjct: 4   NSSAFFVPCHNYNQICDLLLSSARTRSTVKGLQLHGYVVKSGLSLIPLVANNLINFYSKS 63

Query: 202 QLPRDAQDVFHEA 240
           QLP D++  F ++
Sbjct: 64  QLPFDSRRAFEDS 76


>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/58 (50%), Positives = 36/58 (62%)
 Frame = +1

Query: 58  RIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINLYSKLQLPRDAQDVF 231
           R IC  L+  T +RSL +G  LH  +IK G + IPLV HHLIN YSK  LP  +  +F
Sbjct: 8   RDICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLF 65


>gb|ESW34235.1| hypothetical protein PHAVU_001G135800g [Phaseolus vulgaris]
          Length = 583

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/62 (45%), Positives = 39/62 (62%)
 Frame = +1

Query: 46  EQNYRIICNHLLQHTRSRSLLQGQALHSHIIKAGVQIIPLVSHHLINLYSKLQLPRDAQD 225
           + + R IC  L+  T SRSL +G  LH+++IK G + +PLV HH IN YSK  LP  +  
Sbjct: 5   QSDCRDICKVLVCLTHSRSLPKGLQLHAYVIKLGFEALPLVCHHFINFYSKTNLPHSSHK 64

Query: 226 VF 231
           +F
Sbjct: 65  LF 66