BLASTX nr result
ID: Rauwolfia21_contig00024388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00024388
(836 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containi... 212 2e-52
ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containi... 209 1e-51
ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containi... 185 2e-44
ref|XP_006435073.1| hypothetical protein CICLE_v10000229mg [Citr... 185 2e-44
ref|XP_006596427.1| PREDICTED: pentatricopeptide repeat-containi... 183 8e-44
gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily p... 182 2e-43
ref|XP_006416469.1| hypothetical protein EUTSA_v10006756mg [Eutr... 179 1e-42
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ... 178 2e-42
gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis] 177 5e-42
gb|EMJ28416.1| hypothetical protein PRUPE_ppa019183mg [Prunus pe... 177 5e-42
emb|CAA06829.1| DYW7 protein [Arabidopsis thaliana] 174 5e-41
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar... 174 5e-41
gb|ESW14194.1| hypothetical protein PHAVU_008G260600g [Phaseolus... 173 8e-41
ref|XP_006386200.1| pentatricopeptide repeat-containing family p... 172 1e-40
ref|XP_004490605.1| PREDICTED: pentatricopeptide repeat-containi... 170 5e-40
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi... 167 4e-39
ref|XP_004973335.1| PREDICTED: pentatricopeptide repeat-containi... 150 4e-34
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi... 145 2e-32
gb|AFW74323.1| hypothetical protein ZEAMMB73_642674 [Zea mays] 144 4e-32
gb|ABK26521.1| unknown [Picea sitchensis] 141 3e-31
>ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Solanum lycopersicum]
Length = 884
Score = 212 bits (539), Expect = 2e-52
Identities = 113/235 (48%), Positives = 145/235 (61%), Gaps = 2/235 (0%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P L+HCVAMVNL+GRSG+LE AI+FI+ M ++ + S+W ALLTAS V+GN LA++AG
Sbjct: 651 IVPGLEHCVAMVNLYGRSGKLEEAINFIDNMTMEHDISIWGALLTASRVHGNLNLAIHAG 710
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E+ + L G SE S R R++ +E L WS E VH F
Sbjct: 711 EQLFKLDPGNVVIHQLLLQLYVLRGISEESETVMRPRKRNHHEEPLSWSWTEINNVVHAF 770
Query: 361 VGGHHQRNLKVLDSLIKSIGTSTKGYS--NRYLFEEEGNRETSWIHSEKLAFAFALTKSS 534
G Q N +V DS IK +G S NR +EE N + + +HSEKLA +FAL S
Sbjct: 771 ASGQ-QCNSEVPDSWIKRKEVKMEGSSSCNRLCIKEEENEDITRVHSEKLALSFALINSP 829
Query: 535 GACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+ R IRIVK++RMC+DCH AK +S Y +IY+ DSKCLHHFKDG+CSCG YW
Sbjct: 830 QSSRVIRIVKNLRMCEDCHRIAKLVSQKYEREIYIHDSKCLHHFKDGYCSCGNYW 884
>ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Solanum tuberosum]
Length = 884
Score = 209 bits (532), Expect = 1e-51
Identities = 112/235 (47%), Positives = 144/235 (61%), Gaps = 2/235 (0%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P L+H VAMV L+GRSG+LE AIDFI+ M ++ + S+W ALLTAS V+GN LA++AG
Sbjct: 651 IVPGLEHYVAMVTLYGRSGKLEEAIDFIDNMTMEHDISIWGALLTASRVHGNLNLAIHAG 710
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E+ + L G SE S+ R R++ +E L WS E VH F
Sbjct: 711 EQLLKLDPGNVVIHQLLLQLNVLRGISEESVTVMRPRKRNHHEEPLSWSWTEINNVVHAF 770
Query: 361 VGGHHQRNLKVLDSLIKSIGTSTKGYS--NRYLFEEEGNRETSWIHSEKLAFAFALTKSS 534
G Q N +V DS IK +G S NR +EE N + + +HSEKLA +FAL S
Sbjct: 771 ASGQ-QSNSEVPDSWIKRKEVKMEGSSSCNRLCIKEEENEDITRVHSEKLALSFALINSP 829
Query: 535 GACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+ R IRIVK++RMC+DCH AK +S Y +IY+ DSKCLHHFKDG+CSCG YW
Sbjct: 830 QSSRVIRIVKNLRMCEDCHRIAKLVSQKYEREIYIHDSKCLHHFKDGYCSCGNYW 884
>ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
isoform X1 [Glycine max] gi|571441335|ref|XP_006575413.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like isoform X2 [Glycine max]
Length = 896
Score = 185 bits (470), Expect = 2e-44
Identities = 99/233 (42%), Positives = 136/233 (58%), Gaps = 4/233 (1%)
Frame = +1
Query: 13 LDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAGEKXX 192
L+H AMV L GRSG+L A++FI M ++PNSSVW+AL+TA ++ N +A++AGE+
Sbjct: 664 LEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALMTACRIHKNFGMAIFAGERMH 723
Query: 193 XXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTFVGGH 372
+++ G S + + + ++ + S IE VHTFV G
Sbjct: 724 ELDPENIITQHLLSQAYSVCGKSLEAPKMTKLEKEKFVNIPVGQSWIEMNNMVHTFVVGD 783
Query: 373 HQRN--LKVLDSLIKSIGTSTKGY--SNRYLFEEEGNRETSWIHSEKLAFAFALTKSSGA 540
Q L L S +K +G + K + N EEE S +HSEKLAFAF L S
Sbjct: 784 DQSTPYLDKLHSWLKRVGANVKAHISDNGLCIEEEEKENISSVHSEKLAFAFGLIDSHHT 843
Query: 541 CRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+ +RIVK++RMC DCH++AK+IS YGC+IY+ DS CLHHFKDGHCSC YW
Sbjct: 844 PQILRIVKNLRMCRDCHDSAKYISLAYGCEIYLSDSNCLHHFKDGHCSCRDYW 896
>ref|XP_006435073.1| hypothetical protein CICLE_v10000229mg [Citrus clementina]
gi|557537195|gb|ESR48313.1| hypothetical protein
CICLE_v10000229mg [Citrus clementina]
Length = 889
Score = 185 bits (469), Expect = 2e-44
Identities = 100/236 (42%), Positives = 145/236 (61%), Gaps = 3/236 (1%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P ++H AM++L+GRSG+LE A++FI M I+P+SS+W ALLTA ++GN LAV A
Sbjct: 654 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 713
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E+ +A+ G E++L+ ++ ++ + S S IE + V+TF
Sbjct: 714 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEKENTRRNSFGQSWIEVKNLVYTF 773
Query: 361 V-GGHHQRNLKVLDSLIKSI--GTSTKGYSNRYLFEEEGNRETSWIHSEKLAFAFALTKS 531
V GG + +L S ++++ + + + EEE E S IHSEKLA AFAL S
Sbjct: 774 VTGGWSESYSDLLYSWLQNVPENVTARSCHSGLCIEEEEKEEISGIHSEKLALAFALIGS 833
Query: 532 SGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
S A IRIVK++RMC CH+TAK++S + C+I++ DSKCLHHFK+G CSCG YW
Sbjct: 834 SQAPHTIRIVKNIRMCVHCHKTAKYVSKMHHCEIFLADSKCLHHFKNGQCSCGDYW 889
>ref|XP_006596427.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Glycine max]
Length = 896
Score = 183 bits (464), Expect = 8e-44
Identities = 99/233 (42%), Positives = 134/233 (57%), Gaps = 4/233 (1%)
Frame = +1
Query: 13 LDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAGEKXX 192
L+H AMV L GRSG+L A++FI M ++PNSSVW+ALLTA ++ N +A++AGE
Sbjct: 664 LEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALLTACRIHKNFGMAIFAGEHML 723
Query: 193 XXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTFVGGH 372
+++ G S + + + ++ K + S IE VHTFV G
Sbjct: 724 ELDPENIITQHLLSQAYSVCGKSWEAQKMTKLEKEKFVKMPVGQSWIEMNNMVHTFVVGD 783
Query: 373 HQR--NLKVLDSLIKSIGTSTKGY--SNRYLFEEEGNRETSWIHSEKLAFAFALTKSSGA 540
Q L + S +K +G + K + N EEE +HSEKLAFAF L
Sbjct: 784 DQSIPYLDKIHSWLKRVGENVKAHISDNGLRIEEEEKENIGSVHSEKLAFAFGLIDFHHT 843
Query: 541 CRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+ +RIVK++RMC DCH+TAK+IS YGC+IY+ DS CLHHFKDGHCSC YW
Sbjct: 844 PQILRIVKNLRMCRDCHDTAKYISLAYGCEIYLSDSNCLHHFKDGHCSCRDYW 896
>gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
[Theobroma cacao] gi|508722978|gb|EOY14875.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao]
Length = 890
Score = 182 bits (461), Expect = 2e-43
Identities = 98/236 (41%), Positives = 137/236 (58%), Gaps = 3/236 (1%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P ++H AM++++GRSG L A++FI M I+P+SSVW++LLTAS ++ + LAV AG
Sbjct: 655 IIPAVEHYAAMIDVYGRSGRLGEAVEFIEDMPIEPDSSVWTSLLTASRIHRDIALAVLAG 714
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E+ + L G ++ L+ ++ ++ + SL S IE VH F
Sbjct: 715 ERLLDLEPANILINRVMFQIYVLSGKLDDPLKVRKLEKENILRRSLGHSWIEVRNTVHKF 774
Query: 361 VGGHHQRNLK-VLDSLIKSIGTSTK--GYSNRYLFEEEGNRETSWIHSEKLAFAFALTKS 531
V G + +L S +KSI + R+ EEE ET +HSEKL AFAL
Sbjct: 775 VTGDQSKPCADLLYSWVKSIAREVNIHDHHGRFFLEEEEKEETGGVHSEKLTLAFALIGL 834
Query: 532 SGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+ R IRIVK+ RMC +CH TAK+IS +GC+IY+ D KC HHFK+G CSCG YW
Sbjct: 835 PYSPRSIRIVKNTRMCSNCHLTAKYISLKFGCEIYLSDRKCFHHFKNGQCSCGDYW 890
>ref|XP_006416469.1| hypothetical protein EUTSA_v10006756mg [Eutrema salsugineum]
gi|557094240|gb|ESQ34822.1| hypothetical protein
EUTSA_v10006756mg [Eutrema salsugineum]
Length = 893
Score = 179 bits (453), Expect = 1e-42
Identities = 96/237 (40%), Positives = 130/237 (54%), Gaps = 4/237 (1%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P L+HC AM++L+GRS LE A+ FI MN++ + +W + LT ++G+ LA++A
Sbjct: 657 IIPALEHCSAMISLYGRSNRLEEAVQFIQEMNVQSETPIWESFLTGCRIHGDIDLAIHAA 716
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E +AL SL K+ R+ K+ L S IE +HTF
Sbjct: 717 EHLFSLEPENPITENVVSQIYALGAKLGRSLEGKKPRRDNLLKKPLGHSWIEVRNSIHTF 776
Query: 361 V-GGHHQRNLKVLDSLIKSI---GTSTKGYSNRYLFEEEGNRETSWIHSEKLAFAFALTK 528
G Q VL ++ + Y+ L EEEG ET IHSEK A AF L
Sbjct: 777 TTGDKSQLCTDVLYPWVEKLCRLDDRNDQYNGELLIEEEGREETCGIHSEKFAMAFGLIS 836
Query: 529 SSGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
SS A + IRI+K++RMC DCH TAK+IS YGC I ++D++CLHHFK+G CSC YW
Sbjct: 837 SSRAHKTIRILKNLRMCRDCHNTAKYISRRYGCDILLEDTRCLHHFKNGDCSCKDYW 893
>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 887
Score = 178 bits (452), Expect = 2e-42
Identities = 102/232 (43%), Positives = 132/232 (56%), Gaps = 3/232 (1%)
Frame = +1
Query: 13 LDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAGEKXX 192
++H AMV L GRSG+L A+DFI +M I+PNSSVW ALLTA ++ N +AV AG++
Sbjct: 663 MEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIHRNFGVAVLAGKRML 722
Query: 193 XXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTFVGGH 372
++L G +++ +K K + S IE VHTFV G
Sbjct: 723 EFEPGNNITRHLLSQAYSLCG------KFEPEGEKAVNKP-IGQSWIERNNVVHTFVVGD 775
Query: 373 HQRN-LKVLDSLIKSIGTSTKGY--SNRYLFEEEGNRETSWIHSEKLAFAFALTKSSGAC 543
L L S +K + + K + N EEE TS +HSEKLAFAFAL
Sbjct: 776 QSNPYLDKLHSWLKRVAVNVKTHVSDNELYIEEEEKENTSSVHSEKLAFAFALIDPHNKP 835
Query: 544 RCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+ +RIVK +RMC DCH+TAK+IS YGC+IY+ DS CLHHFK GHCSC YW
Sbjct: 836 QILRIVKKLRMCRDCHDTAKYISMAYGCEIYLSDSNCLHHFKGGHCSCRDYW 887
>gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]
Length = 880
Score = 177 bits (448), Expect = 5e-42
Identities = 100/235 (42%), Positives = 129/235 (54%), Gaps = 2/235 (0%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P L+H A+V+L+GR G L A++FI M ++P+SSVW+ALLTAS + N V A
Sbjct: 648 IVPGLEHYAAVVDLYGRPGRLGEAMEFIENMPVEPDSSVWAALLTASRNHRNIGFTVRAL 707
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
+K AL SEN + ++ ++ K L IE + +V+TF
Sbjct: 708 DKILDLEPGNYLIQRLRAQADALVAKSENDPKMRKLEKENATKRHLGRCWIELQNRVYTF 767
Query: 361 VGGHHQRNLKVLDSLIKSIG--TSTKGYSNRYLFEEEGNRETSWIHSEKLAFAFALTKSS 534
V G L I I S G+ EEE E +H EK+A AFAL
Sbjct: 768 VNGDQSE--PYLYPWIHDIAGKASKYGFHEGLCIEEEEKEEVGRVHCEKIAIAFALIGFP 825
Query: 535 GACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+CIRIVKS+RMC +CHETAK+IS TYGC+IYV DSKCLH F +GHCSC YW
Sbjct: 826 RKAQCIRIVKSLRMCGNCHETAKYISKTYGCEIYVTDSKCLHRFSNGHCSCKDYW 880
>gb|EMJ28416.1| hypothetical protein PRUPE_ppa019183mg [Prunus persica]
Length = 882
Score = 177 bits (448), Expect = 5e-42
Identities = 100/236 (42%), Positives = 134/236 (56%), Gaps = 3/236 (1%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P L+H AMV+L+GRSG L+ A++FI M I+P+SSVW AL TA + GN LAV AG
Sbjct: 648 IIPGLEHYSAMVDLYGRSGRLQEAMEFIEGMPIEPDSSVWGALFTACRIYGNLALAVRAG 707
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E +AL G SE+ + ++ + K+ L IE + +HTF
Sbjct: 708 EHLLVSEPGNVLIQQLMLQAYALCGKSEDISKLRKFGKDYPKKKFLGQCWIEVKNSLHTF 767
Query: 361 VGGHHQRNLKVLDSL-IKSIGTSTK--GYSNRYLFEEEGNRETSWIHSEKLAFAFALTKS 531
+ G + + +L +++I K N EEE E WIHSEKLAFAFAL+ S
Sbjct: 768 ISGDRLKLCSIFLNLWLQNIEEKAKTPDLCNELCVEEE-EEEIGWIHSEKLAFAFALSGS 826
Query: 532 SGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+ IRI+K++RMC DCH AK+IS +GC IY+ D K HHF +G CSCG YW
Sbjct: 827 PSVPQSIRIMKNLRMCGDCHRIAKYISVAFGCDIYLSDVKSFHHFSNGRCSCGDYW 882
>emb|CAA06829.1| DYW7 protein [Arabidopsis thaliana]
Length = 406
Score = 174 bits (440), Expect = 5e-41
Identities = 94/238 (39%), Positives = 131/238 (55%), Gaps = 5/238 (2%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P L+HC AMV L+GR+ LE A+ FI MNI+ + +W + LT ++G+ +A++A
Sbjct: 169 IIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAA 228
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E +AL SL + R+ K+ L S IE +HTF
Sbjct: 229 ENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTF 288
Query: 361 VGGHHQRNLK-VLDSLIKSIG---TSTKGYSNRYLFEEEGNRETSWIHSEKLAFAFALTK 528
G + VL L++ + + Y+ EEEG ET IHSEK A AF L
Sbjct: 289 TTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLIS 348
Query: 529 SSGACRC-IRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
SSGA + IRI+K++RMC DCH+TAK++S YGC I ++D++CLHHFK+G CSC YW
Sbjct: 349 SSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 406
>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g19720; AltName: Full=Protein DYW7
gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
[Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 894
Score = 174 bits (440), Expect = 5e-41
Identities = 94/238 (39%), Positives = 131/238 (55%), Gaps = 5/238 (2%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P L+HC AMV L+GR+ LE A+ FI MNI+ + +W + LT ++G+ +A++A
Sbjct: 657 IIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAA 716
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E +AL SL + R+ K+ L S IE +HTF
Sbjct: 717 ENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTF 776
Query: 361 VGGHHQRNLK-VLDSLIKSIG---TSTKGYSNRYLFEEEGNRETSWIHSEKLAFAFALTK 528
G + VL L++ + + Y+ EEEG ET IHSEK A AF L
Sbjct: 777 TTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLIS 836
Query: 529 SSGACRC-IRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
SSGA + IRI+K++RMC DCH+TAK++S YGC I ++D++CLHHFK+G CSC YW
Sbjct: 837 SSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
>gb|ESW14194.1| hypothetical protein PHAVU_008G260600g [Phaseolus vulgaris]
Length = 893
Score = 173 bits (438), Expect = 8e-41
Identities = 97/232 (41%), Positives = 133/232 (57%), Gaps = 3/232 (1%)
Frame = +1
Query: 13 LDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAGEKXX 192
L+H AMV L GRSG+L A +FI M I+PN SVW+A LTA ++ N +A++AGE+
Sbjct: 665 LEHYSAMVYLLGRSGKLAEAQEFILNMPIEPNISVWTAFLTACRIHRNFGMAIFAGERLL 724
Query: 193 XXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTFVGGH 372
++L G + + + ++ P + S IE VHTFV G
Sbjct: 725 ELDPENIITQHLLSQAYSLCGKYWEAPKMTKLEKEKIP---VGQSWIEMNNMVHTFVVGD 781
Query: 373 HQRN-LKVLDSLIKSIGTSTKGY--SNRYLFEEEGNRETSWIHSEKLAFAFALTKSSGAC 543
+ L L S +K + + K + N EEE + + +HSEKLA AFAL S
Sbjct: 782 QSKPYLDKLHSWLKRVHVNVKAHISDNGLCIEEEEKEDINSVHSEKLAIAFALIDSHHRP 841
Query: 544 RCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+ +RIVK++R+C DCH+TAK+IS YGC+IY+ DS CLHHFKDGHCSC YW
Sbjct: 842 QILRIVKNLRVCKDCHDTAKYISLAYGCEIYLSDSNCLHHFKDGHCSCRDYW 893
>ref|XP_006386200.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344175|gb|ERP63997.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 810
Score = 172 bits (436), Expect = 1e-40
Identities = 97/238 (40%), Positives = 131/238 (55%), Gaps = 5/238 (2%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P +H AMV+L+GRSG L+ AI+ I+ M IKP SSVW ALLTA +GN LA+ A
Sbjct: 573 IIPASEHYAAMVDLYGRSGRLKEAIELIDNMPIKPQSSVWYALLTACRNHGNSDLAIRAR 632
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E +A++G E++ + K+ ++ + ++ S IE VH+F
Sbjct: 633 ENLLDLEPWNSSIHQSILQSYAMHGKYEDAPKVKKLEKRNEVQKPKGQSWIEVNNTVHSF 692
Query: 361 VGGHHQRNLKVLDSLIKSIGTSTKGYSNRYLF-----EEEGNRETSWIHSEKLAFAFALT 525
V G + L S ++ I K + EEE E IHSEKLA AFA+
Sbjct: 693 VAGDQSTSYSDLFSWVERISMEAKVHDLHCGCCIEEEEEEEKEEIVGIHSEKLALAFAII 752
Query: 526 KSSGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
+S A + IRIVK++R C DCH AK+IS +GC+IY+ DS HHFK G CSCG YW
Sbjct: 753 RSPSAPQSIRIVKNLRTCADCHRMAKYISAKHGCEIYLSDSNFFHHFKSGCCSCGDYW 810
>ref|XP_004490605.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Cicer arietinum]
Length = 888
Score = 170 bits (431), Expect = 5e-40
Identities = 98/236 (41%), Positives = 128/236 (54%), Gaps = 3/236 (1%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P ++H AMV + GRSG+L A++FI M I+PNS VW ALLTA ++ N +AV AG
Sbjct: 660 IRPGMEHYSAMVYMLGRSGKLAEALEFIQNMPIEPNSLVWDALLTACKIHRNFGMAVLAG 719
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
++ ++L G ++ +K K + IE VHTF
Sbjct: 720 KRLLELEPGNNITRYLLSQAYSLCG------KFTLEEEKAVNKP-VGQCWIERNNTVHTF 772
Query: 361 VGGHHQRN-LKVLDSLIKSIGTSTKG--YSNRYLFEEEGNRETSWIHSEKLAFAFALTKS 531
V G L L S +K + + K + N EEE S +HSEKLAFAFA
Sbjct: 773 VVGDQSYTYLDKLRSWLKRVAVNVKTHVFDNGLCIEEEERENNSIVHSEKLAFAFAFIDP 832
Query: 532 SGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
R + IVK++RMC DCH+TAK+IS YGC+IY+ DS CLHHFK GHCSC YW
Sbjct: 833 HNTPRILHIVKNLRMCRDCHDTAKYISLAYGCEIYLSDSNCLHHFKGGHCSCRDYW 888
>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Vitis vinifera]
Length = 1545
Score = 167 bits (423), Expect = 4e-39
Identities = 96/223 (43%), Positives = 129/223 (57%), Gaps = 3/223 (1%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P L+H AM++L GRSG+L AI+FI M I+P+S +W+ALLTAS ++GN LA+ AG
Sbjct: 661 ILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTASKIHGNIGLAIRAG 720
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E +AL G E+ + ++ ++ + K+ L S IE + VHTF
Sbjct: 721 ECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRKSEKRSETKQPLGCSWIEAKNIVHTF 780
Query: 361 VGGHHQRN-LKVLDSLIKSIGTSTKG--YSNRYLFEEEGNRETSWIHSEKLAFAFALTKS 531
V R L S I+++ K +R EEE E +HSEKLA AFAL
Sbjct: 781 VADDRSRPYFDFLHSWIENVARKVKAPDQHDRLFIEEEEKEEIGGVHSEKLALAFALIDP 840
Query: 532 SGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLH 660
S A R +RIVK++RMC DCH TAKF+S Y C+IY+ DSKCLH
Sbjct: 841 SCAPRSVRIVKNLRMCGDCHGTAKFLSMLYSCEIYLSDSKCLH 883
>ref|XP_004973335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
isoform X1 [Setaria italica]
gi|514795589|ref|XP_004973336.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g19720-like isoform X2 [Setaria italica]
Length = 862
Score = 150 bits (380), Expect = 4e-34
Identities = 96/236 (40%), Positives = 123/236 (52%), Gaps = 3/236 (1%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I+P LDH VAMV+L GR G LE A + I+ M + PN ++W ALLTA+ V+GN RLA A
Sbjct: 629 ITPDLDHYVAMVDLLGRLGRLEEAYELIDEMPLIPNLAIWEALLTAATVHGNVRLANLAA 688
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
+ L G + L KG E +D +E + KV+ F
Sbjct: 689 RELLSIESSDPRIQRLVYNLQDLAGKFVD-LPQTMLSNKGRELEEVDSCSVEIKNKVYLF 747
Query: 361 VGGHH---QRNLKVLDSLIKSIGTSTKGYSNRYLFEEEGNRETSWIHSEKLAFAFALTKS 531
G + +R + L ++ IG S SN EE E S IH EKLA AFA++ S
Sbjct: 748 STGDNFVLERTVAELKLIMIQIGISKLNISNGIPDVEEEEEELSAIHCEKLAIAFAISNS 807
Query: 532 SGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
R IRI+K++RMC CH AK +S Y QI +KDS CLH FK G CSC YW
Sbjct: 808 P-PFRTIRIIKNVRMCRHCHTFAKLVSEKYKRQILIKDSNCLHKFKGGKCSCEDYW 862
>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Cucumis sativus]
Length = 1463
Score = 145 bits (366), Expect = 2e-32
Identities = 86/212 (40%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P LDH +AMV+L+GRSG L AI+FI M I+P+ S+W++LLTA +GN LAV A
Sbjct: 656 ILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAA 715
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
++ +ALYG E +L+ ++ ++ K+ +E KVH F
Sbjct: 716 KRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLF 775
Query: 361 VGGHHQRNLKVLDSLIKSIGTSTKGYSNRY---LFEEEGNRETSWIHSEKLAFAFALTKS 531
V G Q L VL++ IKSI K ++N + + EEE + H EK AFAF L S
Sbjct: 776 VTG-DQSKLDVLNTWIKSIEGKVKKFNNHHQLSIEEEEKEEKIGGFHCEKFAFAFGLIGS 834
Query: 532 SGACRCIRIVKSMRMCDDCHETAKFISNTYGC 627
S + I+IVK++RMC DCH+ AK+IS Y C
Sbjct: 835 SHTRKSIKIVKNLRMCVDCHQMAKYISAAYEC 866
>gb|AFW74323.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
Length = 876
Score = 144 bits (363), Expect = 4e-32
Identities = 92/236 (38%), Positives = 121/236 (51%), Gaps = 3/236 (1%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
I P LDH A+V+L GRSG L+ A +FI M + PN +VW ALLTA+ ++GN RLA
Sbjct: 644 IIPDLDHYTAIVDLLGRSGSLQEAYEFIGNMPLIPNLAVWEALLTAATIHGNARLANLTA 703
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
+ L G S + + G E +D +E + V+ F
Sbjct: 704 RELSSLDPSDPRIQRLVFNYWGLTGKSVD-VPLMTVYNGGRELEDVDSCSVEIKNNVYLF 762
Query: 361 VGGHH---QRNLKVLDSLIKSIGTSTKGYSNRYLFEEEGNRETSWIHSEKLAFAFALTKS 531
G + + + L ++ I S SN EEE E S IH EKLA AFA++ S
Sbjct: 763 STGDNLALESTVAELKLIMIQIRMSLLNISNETNAEEE-KEELSGIHCEKLAIAFAISNS 821
Query: 532 SGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGYW 699
R IRI+K++RMC CH AK +S Y QI +KDS CLH F+DG CSC GYW
Sbjct: 822 P-PFRSIRIIKTLRMCSHCHIFAKLVSEKYERQILIKDSNCLHKFEDGKCSCEGYW 876
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 141 bits (356), Expect = 3e-31
Identities = 85/241 (35%), Positives = 130/241 (53%), Gaps = 8/241 (3%)
Frame = +1
Query: 1 ISPCLDHCVAMVNLFGRSGELEAAIDFINTMNIKPNSSVWSALLTASNVNGNGRLAVYAG 180
ISP +H MV+LFGR+G L+ A++FIN M ++PN+SVW +LL A V+GN LA A
Sbjct: 131 ISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAV 190
Query: 181 EKXXXXXXXXXXXXXXXXXXHALYGASENSLRWKRRRQKGDPKESLDWSCIEDEKKVHTF 360
E+ +A G +++ + ++ + K+ S IE + KVH F
Sbjct: 191 EQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPF 250
Query: 361 VGGH--HQRNLKVLDSL-IKSIGTSTKGY--SNRYLFEEEGNRETSWI---HSEKLAFAF 516
+ G H + ++ ++L ++ GY + ++ + + WI HSEKLA AF
Sbjct: 251 IVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILGHHSEKLAIAF 310
Query: 517 ALTKSSGACRCIRIVKSMRMCDDCHETAKFISNTYGCQIYVKDSKCLHHFKDGHCSCGGY 696
+ S+ IR+VK++R+C DCH KFIS +I ++D+ HHFKDG CSCG Y
Sbjct: 311 GII-STPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQCSCGDY 369
Query: 697 W 699
W
Sbjct: 370 W 370