BLASTX nr result
ID: Rauwolfia21_contig00022641
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00022641
(987 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531375.1| RNA and export factor binding protein, putat... 163 8e-38
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro... 159 2e-36
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 156 1e-35
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo... 156 1e-35
gb|EOY34109.1| RNA-binding family protein [Theobroma cacao] 152 2e-34
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 150 7e-34
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 149 1e-33
ref|XP_004143092.1| PREDICTED: RNA and export factor-binding pro... 149 1e-33
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu... 149 2e-33
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu... 149 2e-33
gb|ESW04085.1| hypothetical protein PHAVU_011G066000g [Phaseolus... 147 5e-33
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 145 2e-32
ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isofor... 144 4e-32
ref|NP_001190572.1| RNA recognition motif-containing protein [Ar... 144 7e-32
gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus... 143 9e-32
dbj|BAB08363.1| RNA and export factor binding protein 2-I-like p... 143 1e-31
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao] 142 3e-31
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof... 141 3e-31
ref|XP_006400896.1| hypothetical protein EUTSA_v10014531mg [Eutr... 141 4e-31
gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus no... 140 1e-30
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 247
Score = 163 bits (413), Expect = 8e-38
Identities = 110/263 (41%), Positives = 144/263 (54%), Gaps = 34/263 (12%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M LDM+LDDIIK+ K + PGPTRRF RG
Sbjct: 1 MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSG-----------------PGPTRRFNNRG 43
Query: 281 GSSRMMPYSS---------------QTGLRMRGMEMVGG--ASYENAGTTLHVSNLDHNV 409
++R PY++ Q G+ M + GG AS GT L++SNL++ V
Sbjct: 44 -TNRAAPYAAAKAPESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGV 102
Query: 410 THADIKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMK 589
++ DIK LFS+VGDLK YS+HYDR+GR KGTAEVVF RR+DALAA+ RYN+ LDGK MK
Sbjct: 103 SNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMK 162
Query: 590 LVLLDSDIVTSNISSASHG-----METQRGAYARHGLMR------------VQGRSLNRG 718
+ ++ ++I T + A++G RG R G MR +GR RG
Sbjct: 163 IEIVGTNIATPAATPAANGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRG 222
Query: 719 QPEEVSAEALDADLEKYHEEAIR 787
+ E+VSAE LDADLEKYH EA++
Sbjct: 223 RGEKVSAEDLDADLEKYHSEAMQ 245
>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 159 bits (402), Expect = 2e-36
Identities = 105/255 (41%), Positives = 141/255 (55%), Gaps = 25/255 (9%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M E LDM+LDDIIKN K + PGP+RRF RG
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSG----------------PGPSRRFRNRG 44
Query: 281 GSSRMMPYSSQTGLRM---RGMEMVGGASYEN---------AGTTLHVSNLDHNVTHADI 424
+R PYS+ M + GA+Y + GT L+VSNLD+ V++ DI
Sbjct: 45 -LNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDI 103
Query: 425 KVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLLD 604
K LFS+VGD+K YS++YD++GR KGTAE+VF R++DALAAI RYN+ LDGK MKL ++
Sbjct: 104 KELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKLEIVG 163
Query: 605 SDIVTSNISSASHGMETQRGAYARHGLMRVQGRS-------------LNRGQPEEVSAEA 745
++IVT + + S+ + R G R GR+ RG E++SAE
Sbjct: 164 TNIVTPAVPAPSNASFGNPNGFPRGG--RAMGRNRGGGRGRSGSGSGSGRGHGEKLSAED 221
Query: 746 LDADLEKYHEEAIRI 790
LDADL+KYHEEA++I
Sbjct: 222 LDADLDKYHEEAMQI 236
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 156 bits (395), Expect = 1e-35
Identities = 101/259 (38%), Positives = 133/259 (51%), Gaps = 29/259 (11%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M LDM+LDD+IKN K PGP RR RG
Sbjct: 1 MSNALDMSLDDLIKNNKRSGGGGNARGRGRGSG----------------PGPARRLPNRG 44
Query: 281 GSSRMMPYSSQTGLRMRGME------------MVGGASYENAGTTLHVSNLDHNVTHADI 424
++R+ PYS G S GT L++SNLD+ V++ DI
Sbjct: 45 -ANRITPYSVSKAPETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDI 103
Query: 425 KVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLLD 604
K LFS+VGDLK YS+HYDR+GR KGTAEVVF RR DA+AA+ RYN+ LDGK MK+ ++
Sbjct: 104 KELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVG 163
Query: 605 SDIVT---------SNISSASHGMETQRGAYARHGLMR--------VQGRSLNRGQPEEV 733
++I T +++ G+ + +G G R +GR RG+ E+V
Sbjct: 164 TNIATPAAVPPVTNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKV 223
Query: 734 SAEALDADLEKYHEEAIRI 790
SAE LDADLEKYH EA++I
Sbjct: 224 SAEDLDADLEKYHSEAMQI 242
>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Cucumis sativus]
Length = 248
Score = 156 bits (394), Expect = 1e-35
Identities = 109/264 (41%), Positives = 143/264 (54%), Gaps = 34/264 (12%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M E LDM+LDDIIKN K + PGP+RRF RG
Sbjct: 1 MAEPLDMSLDDIIKNNKKSGSSNFRARGGASSG----------------PGPSRRFRNRG 44
Query: 281 GSSRMMPYSSQTGLRM---RGMEMVGGASYEN---------AGTTLHVSNLDHNVTHADI 424
+R PYS+ M + GA+Y + GT L+VSNLD+ V++ DI
Sbjct: 45 -LNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVSNEDI 103
Query: 425 KVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLLD 604
K LFS+VGD+K YS++YD++GR KGTAE+ F R++DALAAI RYN+ LDGK MKL ++
Sbjct: 104 KELFSEVGDVKRYSINYDKSGRSKGTAEIXFSRQADALAAIKRYNNVQLDGKPMKLEIVG 163
Query: 605 SDIVTSNI---SSASHG-----------METQRGAYARHGLMRVQGR--------SLNRG 718
++IVT + S+AS G M RG G R +GR RG
Sbjct: 164 TNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSGSGRG 223
Query: 719 QPEEVSAEALDADLEKYHEEAIRI 790
E++SAE LDADL+KYHEEA++I
Sbjct: 224 HGEKLSAEDLDADLDKYHEEAMQI 247
>gb|EOY34109.1| RNA-binding family protein [Theobroma cacao]
Length = 241
Score = 152 bits (384), Expect = 2e-34
Identities = 99/259 (38%), Positives = 137/259 (52%), Gaps = 30/259 (11%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M L+M+LDD+IK + + PGP RRF RG
Sbjct: 1 MSSALEMSLDDLIKRNRKSGSGNSRGRGRGSG-----------------PGPARRFPNRG 43
Query: 281 GSSRMMPYS--------------SQTGLRMRGMEMVGGASYENAGTTLHVSNLDHNVTHA 418
++R PY+ S G +G G AS GT L++SNLD+ V++
Sbjct: 44 -ANRSGPYTAAKAPETTWQHDMYSDKGAAFQGQ--AGRASAIETGTKLYISNLDYGVSND 100
Query: 419 DIKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVL 598
DIK LF++VGDLK +++HYDR+GR KGTAEVVF RR+DA+AA+ RYN+ LDGK MK+ +
Sbjct: 101 DIKELFAEVGDLKRFTIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKIEI 160
Query: 599 LDSDIVTSNISSASHGM-----ETQRGAYARHGLMRVQ-----------GRSLNRGQPEE 730
+ +++ T SA +G RG + R G Q GR +G+ E+
Sbjct: 161 VGTNVATPGAPSAGNGAFGNSNGAPRGGHGRGGGFGKQRGGGGGRGFGRGRGRGKGRGEK 220
Query: 731 VSAEALDADLEKYHEEAIR 787
VSAE LDA+LEKYH EA++
Sbjct: 221 VSAEDLDAELEKYHSEAMQ 239
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 150 bits (379), Expect = 7e-34
Identities = 98/258 (37%), Positives = 135/258 (52%), Gaps = 31/258 (12%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M LDM+LDDIIKN K + PGP RR RG
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSG-----------------PGPARRIPNRG 43
Query: 281 GSSRMMPYSSQTG-------------LRMRGMEMVGGASYENAGTTLHVSNLDHNVTHAD 421
++R+ PY++ + ++ G AS GT L++SNLD+ V++ D
Sbjct: 44 -ANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNED 102
Query: 422 IKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLL 601
IK LFS+VGDLK YS+HYDR+GR KGTAEVV+ RR+DA+AA+ RYN+ LDGK MK+ ++
Sbjct: 103 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEIV 162
Query: 602 DSDIVTSNISSAS-----HGMETQRGAYARHGLMR-------------VQGRSLNRGQPE 727
++I T + A+ + RG R G R +GR R + E
Sbjct: 163 GTNIATRTAAPAANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNE 222
Query: 728 EVSAEALDADLEKYHEEA 781
++SAE LDADL+KY+ EA
Sbjct: 223 KISAEDLDADLDKYYSEA 240
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 149 bits (377), Expect = 1e-33
Identities = 98/258 (37%), Positives = 134/258 (51%), Gaps = 31/258 (12%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M LDM+LDDIIKN K + PGP RR RG
Sbjct: 1 MSSALDMSLDDIIKNNKKSGSGNFRGRGRGSG-----------------PGPARRIPNRG 43
Query: 281 GSSRMMPYSSQTG-------------LRMRGMEMVGGASYENAGTTLHVSNLDHNVTHAD 421
++R+ PY++ + ++ G AS GT L++SNLD+ V++ D
Sbjct: 44 -ANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNED 102
Query: 422 IKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLL 601
IK LFS+VGDLK YS+HYDR+GR KGTAEVV+ RR+DA+AA+ RYN LDGK MK+ ++
Sbjct: 103 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEIV 162
Query: 602 DSDIVTSNISSAS-----HGMETQRGAYARHGLMR-------------VQGRSLNRGQPE 727
++I T + A+ + RG R G R +GR R + E
Sbjct: 163 GTNIATRTAAPAANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERNE 222
Query: 728 EVSAEALDADLEKYHEEA 781
++SAE LDADL+KY+ EA
Sbjct: 223 KISAEDLDADLDKYYSEA 240
>ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus] gi|449508143|ref|XP_004163231.1| PREDICTED: RNA
and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 149 bits (377), Expect = 1e-33
Identities = 102/261 (39%), Positives = 138/261 (52%), Gaps = 31/261 (11%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M LDM+LDDIIKN K + PGP RRF R
Sbjct: 1 MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSG-----------------PGPVRRFPNR- 42
Query: 281 GSSRMMPYSS----------------QTGLRMRGMEMVGGASYENAGTTLHVSNLDHNVT 412
++ PYS+ +G ++G G AS GT L++SNLD+ V+
Sbjct: 43 -AANRTPYSAPKAPETTWQHDMFADPSSGFLVQG----GRASAIQTGTKLYISNLDYGVS 97
Query: 413 HADIKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKL 592
+ DIK LFS+VGD+K + +HYD++GR KGTAEVVF RR DA+AA+ +YN+ LDGK MK+
Sbjct: 98 NEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKI 157
Query: 593 VLLDSDIVTSNI--SSASHGMETQRGAYAR-------------HGLMRVQGRSLNRGQPE 727
++ ++I T + ++A + E GA R HG R GR RG E
Sbjct: 158 EIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRGHGFGR--GRGRGRGPSE 215
Query: 728 EVSAEALDADLEKYHEEAIRI 790
+VSAE LDADLEKYH E+++I
Sbjct: 216 KVSAEDLDADLEKYHAESMQI 236
>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321275|gb|ERP51752.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 244
Score = 149 bits (376), Expect = 2e-33
Identities = 102/257 (39%), Positives = 132/257 (51%), Gaps = 32/257 (12%)
Frame = +2
Query: 113 LDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERGGSSR 292
LDM+LDDII+N + +N PGP+RRF R G+
Sbjct: 6 LDMSLDDIIENNRKSSNSRGRPRSSGG------------------PGPSRRFSNRAGNIT 47
Query: 293 MMPYSSQ--------------TGLRMRGMEMVGGASYENAGTTLHVSNLDHNVTHADIKV 430
PYS T + AS GT L++SNLD V+ DIK
Sbjct: 48 T-PYSKPQVQAPETSWQHDMFTDNPVSASAYPARASSIETGTKLYISNLDFGVSTEDIKE 106
Query: 431 LFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLLDSD 610
LFS++GDLK YSVHYDR+GR +GTAE+VF RR DA++A+ RYN+ LDGK MK+ ++ ++
Sbjct: 107 LFSEIGDLKRYSVHYDRSGRSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTN 166
Query: 611 IVT--------------SNI----SSASHGMETQRGAYARHGLMRVQGRSLNRGQPEEVS 736
I T NI SS G T R HG+ R GR RG+ E++S
Sbjct: 167 IATRPAVPPSTNGMYRNQNIAAPRSSQGRGGTTGRPRGGGHGVRR-GGRGRGRGRGEKIS 225
Query: 737 AEALDADLEKYHEEAIR 787
AE LDADLEKYH EA++
Sbjct: 226 AEDLDADLEKYHSEAMQ 242
>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321276|gb|ERP51753.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 245
Score = 149 bits (375), Expect = 2e-33
Identities = 102/258 (39%), Positives = 132/258 (51%), Gaps = 33/258 (12%)
Frame = +2
Query: 113 LDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERGGSSR 292
LDM+LDDII+N + +N PGP+RRF R G+
Sbjct: 6 LDMSLDDIIENNRKSSNSRGRPRSSGG------------------PGPSRRFSNRAGNIT 47
Query: 293 MMPYSSQ--------------TGLRMRGMEMVGGASYENAGTTLHVSNLDHNVTHADIKV 430
PYS T + AS GT L++SNLD V+ DIK
Sbjct: 48 T-PYSKPQVQAPETSWQHDMFTDNPVSASAYPARASSIETGTKLYISNLDFGVSTEDIKE 106
Query: 431 LFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLLDSD 610
LFS++GDLK YSVHYDR+GR +GTAE+VF RR DA++A+ RYN+ LDGK MK+ ++ ++
Sbjct: 107 LFSEIGDLKRYSVHYDRSGRSEGTAEIVFARREDAVSAVKRYNNVQLDGKPMKIEIVGTN 166
Query: 611 IVT--------------SNI-----SSASHGMETQRGAYARHGLMRVQGRSLNRGQPEEV 733
I T NI SS G T R HG+ R GR RG+ E++
Sbjct: 167 IATRPAVPPSTNGMYRNQNIAAPRSSSQGRGGTTGRPRGGGHGVRR-GGRGRGRGRGEKI 225
Query: 734 SAEALDADLEKYHEEAIR 787
SAE LDADLEKYH EA++
Sbjct: 226 SAEDLDADLEKYHSEAMQ 243
>gb|ESW04085.1| hypothetical protein PHAVU_011G066000g [Phaseolus vulgaris]
Length = 234
Score = 147 bits (372), Expect = 5e-33
Identities = 100/253 (39%), Positives = 136/253 (53%), Gaps = 23/253 (9%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M LD+TLDDIIKN K + PGP+RRF R
Sbjct: 1 MYAALDLTLDDIIKNNKKSGSGNFRGQNRSSGSG---------------PGPSRRFPSRV 45
Query: 281 GSSRMMPYSSQTG-------------LRMRGMEMVGG-ASYENAGTTLHVSNLDHNVTHA 418
++R PY++ + G GG AS GT L +SNLD+ V++
Sbjct: 46 -ANRAAPYAAANADATWKHNLYADQYVAAAGYSARGGFASSIETGTKLFISNLDYGVSND 104
Query: 419 DIKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVL 598
DIK LFS+VGD+K + VHYDR+GR KGTAEVVF RR+DA+AA+ RYN+ LDGK MK+ +
Sbjct: 105 DIKELFSEVGDMKRHGVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEI 164
Query: 599 LDSDIVTSNISSASHGMETQRGAYARHGLMRVQGRSLNRGQ---------PEEVSAEALD 751
++I T + + G + GA + G R QG +RGQ +++SA+ LD
Sbjct: 165 AGANISTPGVPRSGQG---RNGALRKPG-GRGQGMQRDRGQGRGHGGGRRDDKLSADDLD 220
Query: 752 ADLEKYHEEAIRI 790
ADLEKYH EA+++
Sbjct: 221 ADLEKYHAEAMQL 233
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 145 bits (367), Expect = 2e-32
Identities = 100/264 (37%), Positives = 141/264 (53%), Gaps = 34/264 (12%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M +DM+LDDIIKN K + GP+RRF R
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRIRPSGS-----------------GPSRRFPNRA 43
Query: 281 GSSRMMPYSSQTG--------------LRMRGMEMVGG-ASYENAGTTLHVSNLDHNVTH 415
++R PY++ + G GG A+ GT L++SNLD+ V+
Sbjct: 44 -ANRAAPYATAKAPEATWQHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDYGVSS 102
Query: 416 ADIKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLV 595
DIK LF++VGDLK ++VHYDR+GR KGTAEVVF RR+DA+AA+ RYN+ LDGK MK+
Sbjct: 103 DDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIE 162
Query: 596 LLDSDIVTSNISSASHGM-----------ETQRGAYAR-----HGLMRVQGRSLNR---G 718
++ ++I T ++ A +G + + GA R G+ R +GR R G
Sbjct: 163 IVGTNISTPGVAPARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGRGGAG 222
Query: 719 QPEEVSAEALDADLEKYHEEAIRI 790
+ E+VSA+ LDADLEKYH EA+++
Sbjct: 223 RGEKVSADDLDADLEKYHAEAMQL 246
>ref|XP_006592204.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571492362|ref|XP_006592205.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 144 bits (364), Expect = 4e-32
Identities = 99/264 (37%), Positives = 141/264 (53%), Gaps = 34/264 (12%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M +DM+LDDIIKN K + GPTRR R
Sbjct: 1 MSAAMDMSLDDIIKNNKKSGSGSSRGRTRPSGS-----------------GPTRRLPNRA 43
Query: 281 GSSRMMPYS--------------SQTGLRMRGMEMVGG-ASYENAGTTLHVSNLDHNVTH 415
++R PY+ + + G GG A+ GT L++SNLD+ V++
Sbjct: 44 -ANRAAPYAPAKAPEATWQHDLYADQHVAAAGYPAQGGRAASIETGTKLYISNLDYGVSN 102
Query: 416 ADIKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLV 595
DIK LF++VGDLK ++VHYDR+GR KGTAEVVF RR+DA++A+ RYN+ LDGK MK+
Sbjct: 103 DDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVSAVKRYNNVQLDGKPMKIE 162
Query: 596 LLDSDIVTSNISSASHGM-----------ETQRGAYAR-----HGLMRVQGRSLNR---G 718
++ ++I T ++ A +G + + GA R G+ R +GR R G
Sbjct: 163 IVGTNISTPGVAPAPNGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGG 222
Query: 719 QPEEVSAEALDADLEKYHEEAIRI 790
+ E+VSA+ LDADLEKYH EA+++
Sbjct: 223 RGEKVSADDLDADLEKYHAEAMQL 246
>ref|NP_001190572.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332009875|gb|AED97258.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 245
Score = 144 bits (362), Expect = 7e-32
Identities = 97/254 (38%), Positives = 132/254 (51%), Gaps = 30/254 (11%)
Frame = +2
Query: 101 MVEGLDMTLDDII-KNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLER 277
M GLDM+LDD+I KN+K++ PGPTRR
Sbjct: 1 MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSG----------------PGPTRRNNPN 44
Query: 278 GGSSRMMPYSSQTGLRMR-GMEMVGGASYEN----------AGTTLHVSNLDHNVTHADI 424
S+R PY S G +M S ++ GT L++SNLD+ V + DI
Sbjct: 45 RKSTRSAPYQSAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDI 104
Query: 425 KVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLLD 604
K LF++VG+LK Y+VH+DR+GR KGTAEVV+ RR DALAA+ +YND LDGK MK+ ++
Sbjct: 105 KELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVG 164
Query: 605 SDIVTSNISSA------SHGMETQRGAYARHGLMR------------VQGRSLNRGQPEE 730
+++ T+ S S+G RG R G R +GR +G E+
Sbjct: 165 TNLQTAAAPSGRPANGNSNGAPWSRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEK 224
Query: 731 VSAEALDADLEKYH 772
+SAE LDADL+KYH
Sbjct: 225 ISAEDLDADLDKYH 238
>gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023569|gb|ESW22299.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
Length = 245
Score = 143 bits (361), Expect = 9e-32
Identities = 101/262 (38%), Positives = 133/262 (50%), Gaps = 32/262 (12%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M LDMTLDDIIKN K A+ PGP RR R
Sbjct: 1 MSAALDMTLDDIIKNNKKSASANTRGRGRASG-----------------PGPARRLPNRA 43
Query: 281 GSSRMMPYSS--------------QTGLRMRGMEMVGGASYENAGTTLHVSNLDHNVTHA 418
G+ R PY++ G+ G AS GT L++SNLD+ V++
Sbjct: 44 GN-RPAPYAAAKAPESAWQHDMYADQGVATAFAGQGGRASSIETGTKLYISNLDYGVSND 102
Query: 419 DIKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVL 598
DIK LF +VGDLK ++VHYDR+GR KGTAEVVF RR+DA+AA+ RY++ LDGK MK+ +
Sbjct: 103 DIKELFLEVGDLKRHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEI 162
Query: 599 LDSDIVTSNISSASHGMETQRGAYARHG------LMRVQGRSLNRG------------QP 724
+ ++I T +G G R G L R +G RG +
Sbjct: 163 VGTNIATHAAVPPVNGTFGNSGGPPRSGQGRSGLLGRPRGAPRGRGSSRRGRGGRGRDRD 222
Query: 725 EEVSAEALDADLEKYHEEAIRI 790
E+VSAE LDA+LEKYH EA+++
Sbjct: 223 EKVSAEDLDAELEKYHAEAMQL 244
>dbj|BAB08363.1| RNA and export factor binding protein 2-I-like protein [Arabidopsis
thaliana]
Length = 239
Score = 143 bits (360), Expect = 1e-31
Identities = 94/248 (37%), Positives = 128/248 (51%), Gaps = 24/248 (9%)
Frame = +2
Query: 101 MVEGLDMTLDDII-KNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLER 277
M GLDM+LDD+I KN+K++ PGPTRR
Sbjct: 1 MSTGLDMSLDDMIAKNRKSRGGAGPARGTGSGSG----------------PGPTRRNNPN 44
Query: 278 GGSSRMMPYSSQTGLRMR-GMEMVGGASYEN----------AGTTLHVSNLDHNVTHADI 424
S+R PY S G +M S ++ GT L++SNLD+ V + DI
Sbjct: 45 RKSTRSAPYQSAKAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDI 104
Query: 425 KVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLLD 604
K LF++VG+LK Y+VH+DR+GR KGTAEVV+ RR DALAA+ +YND LDGK MK+ ++
Sbjct: 105 KELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVG 164
Query: 605 SDIVTSNISSASHGMETQRGAYARHGLMR------------VQGRSLNRGQPEEVSAEAL 748
+++ T+ S G R G R +GR +G E++SAE L
Sbjct: 165 TNLQTAAAPSGRPANGNSNGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDL 224
Query: 749 DADLEKYH 772
DADL+KYH
Sbjct: 225 DADLDKYH 232
>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 142 bits (357), Expect = 3e-31
Identities = 96/257 (37%), Positives = 130/257 (50%), Gaps = 28/257 (10%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M LDM+LDD+IK+ + GP+RRF R
Sbjct: 1 MTNPLDMSLDDLIKSNRKSGLTRTRPPLNSGN------------------GPSRRFPNRA 42
Query: 281 GSSRMMPYSSQTGLR----MRGMEMVGGASYENA---------GTTLHVSNLDHNVTHAD 421
++R PYS M + GA + +A GT L++SNLD+ V++ D
Sbjct: 43 -ANRTAPYSKPVQAPDTTWQHDMFVDDGAGFPSAAGRASSIETGTKLYISNLDYGVSNED 101
Query: 422 IKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLL 601
IK LFS+VGD+K YSVHYDR+GR KGTAEVVF RR+DA A RYN LDGK MK+ ++
Sbjct: 102 IKELFSEVGDMKRYSVHYDRSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMKIEIV 161
Query: 602 DSDIVT---------------SNISSASHGMETQRGAYARHGLMRVQGRSLNRGQPEEVS 736
+++ T + + + G + G G +GR RGQ E+VS
Sbjct: 162 GTNVATPVALPPATNGKFANPNGVPRSGQGRGSFSGRSRGPGRGARRGRGQGRGQGEKVS 221
Query: 737 AEALDADLEKYHEEAIR 787
AE LDADLE YH+EA++
Sbjct: 222 AEDLDADLENYHKEAMQ 238
>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
Length = 243
Score = 141 bits (356), Expect = 3e-31
Identities = 100/261 (38%), Positives = 138/261 (52%), Gaps = 31/261 (11%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M LDMTL+DIIKN K + PGP RR R
Sbjct: 1 MSAALDMTLEDIIKNNKKSSLANTRGRGRASG-----------------PGPARRLPNRA 43
Query: 281 GSSRMMPYSS----QTGLR--MRGMEMV------GGASYENAGTTLHVSNLDHNVTHADI 424
++R PY++ +T + M + V G AS GT L++SNLD+ V++ DI
Sbjct: 44 -ANRAAPYAAAKAPETAWKHDMYANQPVAAAYPGGRASSIETGTKLYISNLDYGVSNDDI 102
Query: 425 KVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLLD 604
K LF +VGD+K ++VHYDR+GR KGTAEVVF RR+DA+AA+ RYN+ LDGK MK+ ++
Sbjct: 103 KELFLEVGDVKRHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVG 162
Query: 605 SDIVTSNISSASHGM-------------------ETQRGAYARHGLMRVQGRSLNRGQPE 727
++I T A +G + G+ R + R +GR G+ E
Sbjct: 163 TNIATHAAPPAVNGTFGNPTGVPRSGQGRSGSLGRPRGGSRGRGSIQRGRGRG-RGGRDE 221
Query: 728 EVSAEALDADLEKYHEEAIRI 790
+VSAE LDADLEKYH EA+++
Sbjct: 222 KVSAEDLDADLEKYHAEAMQL 242
>ref|XP_006400896.1| hypothetical protein EUTSA_v10014531mg [Eutrema salsugineum]
gi|557101986|gb|ESQ42349.1| hypothetical protein
EUTSA_v10014531mg [Eutrema salsugineum]
Length = 241
Score = 141 bits (355), Expect = 4e-31
Identities = 97/252 (38%), Positives = 131/252 (51%), Gaps = 28/252 (11%)
Frame = +2
Query: 101 MVEGLDMTLDDII-KNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLER 277
M GLDM+LDD+I KN+K++ + PGPTRR
Sbjct: 1 MATGLDMSLDDMIAKNRKSRGSGPARGSGSGSG-----------------PGPTRRNNAN 43
Query: 278 GGSSRMMPYSSQTGLRM---------RGMEMVGGASYENAG----TTLHVSNLDHNVTHA 418
S+R PY S R +S +AG T L++SNLD+ V +
Sbjct: 44 RKSNRSAPYQSAKAPESTWEHDMYSDRSEAFPPRSSRSSAGIETGTKLYISNLDYGVMNE 103
Query: 419 DIKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVL 598
DIK LF++VG+LK Y+VH+DR+GR KGTAEVVF RR DALAA+ +YND LDGK MK+ +
Sbjct: 104 DIKELFAEVGELKRYTVHFDRSGRSKGTAEVVFTRRGDALAAVKKYNDVQLDGKPMKIEI 163
Query: 599 LDSDIVTSNISSASHGMETQRGAYARHGLMRVQGRSLNR--------------GQPEEVS 736
L ++ T+ +++ ++RG R G R GR R G E++S
Sbjct: 164 LGGNLQTARPGNSNFN-GSRRGGQGRGGQQRSGGRGGGRGGGRGGGRGGRPGKGPAEKIS 222
Query: 737 AEALDADLEKYH 772
AE LDADL+KYH
Sbjct: 223 AEDLDADLDKYH 234
>gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus notabilis]
Length = 248
Score = 140 bits (352), Expect = 1e-30
Identities = 98/263 (37%), Positives = 135/263 (51%), Gaps = 34/263 (12%)
Frame = +2
Query: 101 MVEGLDMTLDDIIKNKKAKANXXXXXXXXXXXXXXXXXXXXXXXXXXYCPGPTRRFLERG 280
M + L M+LDDIIK K + PGP RR R
Sbjct: 1 MSDPLSMSLDDIIKTNKKTGSGNPRGRGRLSGG----------------PGPARRVPNRA 44
Query: 281 GSSRMMPYSS---------QTGLRMRG----MEMVGGASYENAGTTLHVSNLDHNVTHAD 421
+R PY++ Q + M G AS GT L++SNL++ V++ D
Sbjct: 45 -PNRAAPYAAAPKAPETTWQHDMYMDQGTAFAAQAGRASAIQTGTKLYISNLEYGVSNED 103
Query: 422 IKVLFSDVGDLKWYSVHYDRNGRPKGTAEVVFERRSDALAAITRYNDRLLDGKRMKLVLL 601
IK LFS+VGDLK Y++HYDR+GR KGTAEVVF RR+DA+AA+ RYN+ LDGK MK+ ++
Sbjct: 104 IKELFSEVGDLKRYAIHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIV 163
Query: 602 DSDIVT------------SNISSASHGMETQ-RGAYAR--------HGLMRVQGRSLNRG 718
+++ T N + G + + GA+ R G R +GR RG
Sbjct: 164 GTNVATPAAPPPPANGSFGNSNGLPRGGQGRGGGAFGRPRGGGGGGRGPRRGRGRGQGRG 223
Query: 719 QPEEVSAEALDADLEKYHEEAIR 787
E++SA+ LDADLEKYH EA++
Sbjct: 224 TGEKISADDLDADLEKYHAEAMQ 246