BLASTX nr result
ID: Rauwolfia21_contig00022580
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rauwolfia21_contig00022580
(457 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352924.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 76 4e-12
ref|XP_004245927.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 76 4e-12
gb|ADE76731.1| unknown [Picea sitchensis] 68 1e-09
emb|CAA09197.1| RNA helicase [Arabidopsis thaliana] 67 2e-09
gb|EOY25262.1| DEAD-box ATP-dependent RNA helicase 5 isoform 4 [... 67 3e-09
gb|EOY25259.1| DEA(D/H)-box RNA helicase family protein isoform ... 67 3e-09
ref|XP_004956008.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 66 6e-09
ref|XP_006432651.1| hypothetical protein CICLE_v10000690mg [Citr... 65 9e-09
ref|XP_006415274.1| hypothetical protein EUTSA_v10007300mg [Eutr... 65 9e-09
gb|EMT29765.1| DEAD-box ATP-dependent RNA helicase 5 [Aegilops t... 65 9e-09
ref|NP_174479.1| stress response suppressor 1 [Arabidopsis thali... 65 9e-09
ref|XP_003561254.1| PREDICTED: uncharacterized protein LOC100821... 65 9e-09
ref|XP_002890959.1| predicted protein [Arabidopsis lyrata subsp.... 65 9e-09
ref|XP_002459736.1| hypothetical protein SORBIDRAFT_02g009590 [S... 65 1e-08
ref|XP_006307193.1| hypothetical protein CARUB_v10008785mg [Caps... 64 2e-08
ref|XP_004160994.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 64 2e-08
ref|XP_004144413.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 64 2e-08
ref|XP_006471462.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 64 3e-08
gb|EMJ11075.1| hypothetical protein PRUPE_ppa003892mg [Prunus pe... 64 3e-08
ref|XP_006432654.1| hypothetical protein CICLE_v10003217mg [Citr... 63 4e-08
>ref|XP_006352924.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Solanum
tuberosum]
Length = 557
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHFREIDANAPKATK KFGDSD+E+
Sbjct: 520 GTHVKKKESKLYGAHFREIDANAPKATKIKFGDSDNED 557
>ref|XP_004245927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Solanum
lycopersicum]
Length = 553
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHFREIDANAPKATK KFGDSD+E+
Sbjct: 516 GTHVKKKESKLYGAHFREIDANAPKATKIKFGDSDNED 553
>gb|ADE76731.1| unknown [Picea sitchensis]
Length = 236
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDE 111
GTHVKKKESKLYGAHF+EI ANAPK+TK F DSDDE
Sbjct: 200 GTHVKKKESKLYGAHFKEITANAPKSTKITFADSDDE 236
>emb|CAA09197.1| RNA helicase [Arabidopsis thaliana]
Length = 411
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHF+EI A+APKATK F +SDDEN
Sbjct: 374 GTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDEN 411
>gb|EOY25262.1| DEAD-box ATP-dependent RNA helicase 5 isoform 4 [Theobroma cacao]
Length = 419
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHF+EI ANAPKA K F +SDDEN
Sbjct: 382 GTHVKKKESKLYGAHFKEIAANAPKAKKITFDNSDDEN 419
>gb|EOY25259.1| DEA(D/H)-box RNA helicase family protein isoform 1 [Theobroma
cacao]
Length = 550
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHF+EI ANAPKA K F +SDDEN
Sbjct: 513 GTHVKKKESKLYGAHFKEIAANAPKAKKITFDNSDDEN 550
>ref|XP_004956008.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Setaria
italica]
Length = 514
Score = 65.9 bits (159), Expect = 6e-09
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDE 111
GTHVKKKESKLYG+HF+EI A+APKATK FGDSD++
Sbjct: 478 GTHVKKKESKLYGSHFKEITADAPKATKITFGDSDED 514
>ref|XP_006432651.1| hypothetical protein CICLE_v10000690mg [Citrus clementina]
gi|568834722|ref|XP_006471460.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 5-like [Citrus sinensis]
gi|557534773|gb|ESR45891.1| hypothetical protein
CICLE_v10000690mg [Citrus clementina]
Length = 580
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHFREI A+APKA K F +SDDE+
Sbjct: 543 GTHVKKKESKLYGAHFREISADAPKAKKITFNNSDDED 580
>ref|XP_006415274.1| hypothetical protein EUTSA_v10007300mg [Eutrema salsugineum]
gi|557093045|gb|ESQ33627.1| hypothetical protein
EUTSA_v10007300mg [Eutrema salsugineum]
Length = 543
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHF+EI A+APKATK F +SDDE+
Sbjct: 506 GTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDED 543
>gb|EMT29765.1| DEAD-box ATP-dependent RNA helicase 5 [Aegilops tauschii]
Length = 486
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDE 111
GTHVKKKESK+YG+HF+EI A+APK+TK FGDSD+E
Sbjct: 450 GTHVKKKESKIYGSHFKEITADAPKSTKITFGDSDEE 486
>ref|NP_174479.1| stress response suppressor 1 [Arabidopsis thaliana]
gi|75333350|sp|Q9C551.1|RH5_ARATH RecName: Full=DEAD-box
ATP-dependent RNA helicase 5
gi|12321302|gb|AAG50723.1|AC079041_16 p68 RNA helicase,
putative [Arabidopsis thaliana]
gi|12321459|gb|AAG50784.1|AC074309_1 RNA helicase,
putative [Arabidopsis thaliana]
gi|19347812|gb|AAL86356.1| putative p68 RNA helicase
[Arabidopsis thaliana] gi|21436171|gb|AAM51373.1|
putative p68 RNA helicase [Arabidopsis thaliana]
gi|332193302|gb|AEE31423.1| stress response suppressor 1
[Arabidopsis thaliana]
Length = 537
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHF+EI A+APKATK F +SDDE+
Sbjct: 500 GTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDED 537
>ref|XP_003561254.1| PREDICTED: uncharacterized protein LOC100821068 [Brachypodium
distachyon]
Length = 961
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDE 111
GTHVKKKESK+YG+HF+EI A+APK+TK FGDSD+E
Sbjct: 925 GTHVKKKESKIYGSHFKEITADAPKSTKITFGDSDEE 961
>ref|XP_002890959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336801|gb|EFH67218.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 539
Score = 65.1 bits (157), Expect = 9e-09
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHF+EI A+APKATK F +SDDE+
Sbjct: 502 GTHVKKKESKLYGAHFKEIAADAPKATKITFDNSDDED 539
>ref|XP_002459736.1| hypothetical protein SORBIDRAFT_02g009590 [Sorghum bicolor]
gi|241923113|gb|EER96257.1| hypothetical protein
SORBIDRAFT_02g009590 [Sorghum bicolor]
Length = 512
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDE 111
GTHVKKKESKLYG+HF+EI A+APK+TK FGDSD++
Sbjct: 476 GTHVKKKESKLYGSHFKEITADAPKSTKITFGDSDED 512
>ref|XP_006307193.1| hypothetical protein CARUB_v10008785mg [Capsella rubella]
gi|482575904|gb|EOA40091.1| hypothetical protein
CARUB_v10008785mg [Capsella rubella]
Length = 543
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHFREI A+APKA K F +SDDE+
Sbjct: 506 GTHVKKKESKLYGAHFREIAADAPKAKKITFDNSDDED 543
>ref|XP_004160994.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Cucumis
sativus]
Length = 532
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDE 111
GTHVKKKESKLYGAHF+EI A+APK+ K F DSDDE
Sbjct: 496 GTHVKKKESKLYGAHFKEITADAPKSKKITFNDSDDE 532
>ref|XP_004144413.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Cucumis
sativus]
Length = 532
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDE 111
GTHVKKKESKLYGAHF+EI A+APK+ K F DSDDE
Sbjct: 496 GTHVKKKESKLYGAHFKEITADAPKSKKITFNDSDDE 532
>ref|XP_006471462.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Citrus
sinensis]
Length = 118
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDE 111
GTHVKKKESKLYGAHFREI A+APKA K F +SDD+
Sbjct: 81 GTHVKKKESKLYGAHFREISADAPKAKKIPFNNSDDQ 117
>gb|EMJ11075.1| hypothetical protein PRUPE_ppa003892mg [Prunus persica]
Length = 542
Score = 63.5 bits (153), Expect = 3e-08
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDEN 114
GTHVKKKESKLYGAHFREI +APK+ K F +SDDEN
Sbjct: 505 GTHVKKKESKLYGAHFREIPVDAPKSKKITFDNSDDEN 542
>ref|XP_006432654.1| hypothetical protein CICLE_v10003217mg [Citrus clementina]
gi|557534776|gb|ESR45894.1| hypothetical protein
CICLE_v10003217mg [Citrus clementina]
Length = 293
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +1
Query: 1 GTHVKKKESKLYGAHFREIDANAPKATKTKFGDSDDE 111
GTHVKKKESKLYGAHFREI A+APKA K F +SDDE
Sbjct: 256 GTHVKKKESKLYGAHFREILADAPKAKKITFNNSDDE 292